RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NPY5RQ15761 445 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 PNMA1Q8ND90 353 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 PCDHA5Q9Y5H7 936 aa25.09■■□□□ 1.61
TPM4-201ENST00000300933 CALM1P0DP23 149 aa25.08■■□□□ 1.61
TPM4-201ENST00000300933 CALM2P0DP24 149 aa25.08■■□□□ 1.61
TPM4-201ENST00000300933 CALM3P0DP25 149 aa25.08■■□□□ 1.61
TPM4-201ENST00000300933 PTPREP23469 700 aa25.08■■□□□ 1.61
TPM4-201ENST00000300933 PTPN21Q16825 1174 aa25.08■■□□□ 1.61
TPM4-201ENST00000300933 KRBA2Q6ZNG9 492 aa25.08■■□□□ 1.61
TPM4-201ENST00000300933 TEX11Q8IYF3 940 aa25.08■■□□□ 1.61
TPM4-201ENST00000300933 RGS22Q8NE09 1264 aa25.08■■□□□ 1.61
TPM4-201ENST00000300933 SERTAD1Q9UHV2 236 aa25.08■■□□□ 1.61
TPM4-201ENST00000300933 DDX41Q9UJV9 622 aaKnown RBP25.08■■□□□ 1.61
TPM4-201ENST00000300933 CEP135Q66GS9 1140 aa25.08■■□□□ 1.6
TPM4-201ENST00000300933 EPSTI1Q96J88 318 aa25.08■■□□□ 1.6
TPM4-201ENST00000300933 PAXBP1Q9Y5B6 917 aa25.08■■□□□ 1.6
TPM4-201ENST00000300933 BBOX1O75936 387 aa25.07■■□□□ 1.6
TPM4-201ENST00000300933 PRR29P0C7W0 189 aa25.07■■□□□ 1.6
TPM4-201ENST00000300933 ZNF444Q8N0Y2 327 aaPredicted RBP25.07■■□□□ 1.6
TPM4-201ENST00000300933 USP27XA6NNY8 438 aa25.07■■□□□ 1.6
TPM4-201ENST00000300933 NLRP5P59047 1200 aa25.07■■□□□ 1.6
TPM4-201ENST00000300933 GSTO1P78417 241 aa25.07■■□□□ 1.6
TPM4-201ENST00000300933 PPP2R5BQ15173 497 aa25.07■■□□□ 1.6
TPM4-201ENST00000300933 DOK7Q18PE1 504 aa25.07■■□□□ 1.6
TPM4-201ENST00000300933 COL23A1Q86Y22 540 aaPredicted RBP25.07■■□□□ 1.6
TPM4-201ENST00000300933 RASGRP4Q8TDF6 673 aa25.07■■□□□ 1.6
TPM4-201ENST00000300933 PIK3AP1Q6ZUJ8 805 aa25.06■■□□□ 1.6
TPM4-201ENST00000300933 TRIM75PA6NK02 468 aa25.06■■□□□ 1.6
TPM4-201ENST00000300933 ATP1A3P13637 1013 aa25.06■■□□□ 1.6
TPM4-201ENST00000300933 CASP1P29466 404 aa25.06■■□□□ 1.6
TPM4-201ENST00000300933 PICALMQ13492 652 aa25.06■■□□□ 1.6
TPM4-201ENST00000300933 IL1R1P14778 569 aa25.05■■□□□ 1.6
TPM4-201ENST00000300933 UTRNP46939 3433 aa25.05■■□□□ 1.6
TPM4-201ENST00000300933 BRWD3Q6RI45 1802 aa25.05■■□□□ 1.6
TPM4-201ENST00000300933 SMC2O95347 1197 aa25.05■■□□□ 1.6
TPM4-201ENST00000300933 LDHCP07864 332 aa25.05■■□□□ 1.6
TPM4-201ENST00000300933 SCG2P13521 617 aa25.05■■□□□ 1.6
TPM4-201ENST00000300933 BMP6P22004 513 aa25.05■■□□□ 1.6
TPM4-201ENST00000300933 RBM6P78332 1123 aaKnown RBP25.05■■□□□ 1.6
TPM4-201ENST00000300933 SYCP1Q15431 976 aa25.05■■□□□ 1.6
TPM4-201ENST00000300933 KIF18AQ8NI77 898 aa25.05■■□□□ 1.6
TPM4-201ENST00000300933 PPEF1O14829 653 aaPredicted RBP25.04■■□□□ 1.6
TPM4-201ENST00000300933 APBA3O96018 575 aa25.04■■□□□ 1.6
TPM4-201ENST00000300933 PPP4CP60510 307 aa25.04■■□□□ 1.6
TPM4-201ENST00000300933 NCAPHQ15003 741 aa25.04■■□□□ 1.6
TPM4-201ENST00000300933 SLC35G1Q2M3R5 365 aa25.04■■□□□ 1.6
TPM4-201ENST00000300933 TIGD1Q96MW7 591 aa25.04■■□□□ 1.6
TPM4-201ENST00000300933 IFNKQ9P0W0 207 aa25.04■■□□□ 1.6
TPM4-201ENST00000300933 ZNF219Q9P2Y4 722 aaPredicted RBP25.04■■□□□ 1.6
TPM4-201ENST00000300933 KIAA1551Q9HCM1 1747 aa25.04■■□□□ 1.6
TPM4-201ENST00000300933 A0A087X0B3 334 aa25.04■■□□□ 1.6
TPM4-201ENST00000300933 RASA1P20936 1047 aa25.04■■□□□ 1.6
TPM4-201ENST00000300933 SARM1Q6SZW1 724 aa25.04■■□□□ 1.6
TPM4-201ENST00000300933 SLURP2P0DP57 97 aa25.03■■□□□ 1.6
TPM4-201ENST00000300933 TUBE1Q9UJT0 475 aa25.03■■□□□ 1.6
TPM4-201ENST00000300933 SRPRBQ9Y5M8 271 aaKnown RBP25.03■■□□□ 1.6
TPM4-201ENST00000300933 SLFN14P0C7P3 912 aa25.03■■□□□ 1.6
TPM4-201ENST00000300933 HOXA10P31260 410 aaPredicted RBP25.03■■□□□ 1.6
TPM4-201ENST00000300933 TYW1BQ6NUM6 668 aa25.03■■□□□ 1.6
TPM4-201ENST00000300933 AMOTL1Q8IY63 956 aa25.03■■□□□ 1.6
TPM4-201ENST00000300933 XPO4Q9C0E2 1151 aaKnown RBP25.03■■□□□ 1.6
TPM4-201ENST00000300933 TRMT1Q9NXH9 659 aaKnown RBP25.03■■□□□ 1.6
TPM4-201ENST00000300933 ZNF215Q9UL58 517 aaPredicted RBP25.03■■□□□ 1.6
TPM4-201ENST00000300933 FAM237AA0A1B0GTK4 181 aa25.02■■□□□ 1.6
TPM4-201ENST00000300933 SCNN1DP51172 638 aa25.02■■□□□ 1.6
TPM4-201ENST00000300933 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.02■■□□□ 1.6
TPM4-201ENST00000300933 STAMQ92783 540 aa25.02■■□□□ 1.6
TPM4-201ENST00000300933 DHX58Q96C10 678 aa25.02■■□□□ 1.6
TPM4-201ENST00000300933 TMEM47Q9BQJ4 181 aa25.02■■□□□ 1.6
TPM4-201ENST00000300933 GPR75-ASB3A0A0A6YYF3 556 aa25.02■■□□□ 1.6
TPM4-201ENST00000300933 CDK8P49336 464 aa25.02■■□□□ 1.6
TPM4-201ENST00000300933 RHBDL3P58872 404 aa25.02■■□□□ 1.6
TPM4-201ENST00000300933 C15orf52Q6ZUT6 534 aaKnown RBP25.02■■□□□ 1.6
TPM4-201ENST00000300933 FLT1P17948 1338 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 ZBTB22O15209 634 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 MCM7P33993 719 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 AFMP43652 599 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 GABPB1Q06547 395 aaPredicted RBP25.01■■□□□ 1.59
TPM4-201ENST00000300933 KMT5BQ4FZB7 885 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 TNFRSF25Q93038 417 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 VWA3AA6NCI4 1184 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 CYTH3O43739 400 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 MDM2Q00987 491 aaPredicted RBP25.01■■□□□ 1.59
TPM4-201ENST00000300933 PTGDRQ13258 359 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 PFKFB3Q16875 520 aaPredicted RBP25.01■■□□□ 1.59
TPM4-201ENST00000300933 LRRC8AQ8IWT6 810 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 MRFAP1L1Q96HT8 127 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 KCNQ5Q9NR82 932 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 MAD2L2Q9UI95 211 aa25.01■■□□□ 1.59
TPM4-201ENST00000300933 MORC2Q9Y6X9 1032 aaPredicted RBP25.01■■□□□ 1.59
TPM4-201ENST00000300933 CRAMP1Q96RY5 1269 aa25■■□□□ 1.59
TPM4-201ENST00000300933 MMP10P09238 476 aa25■■□□□ 1.59
TPM4-201ENST00000300933 CDC25AP30304 524 aa25■■□□□ 1.59
TPM4-201ENST00000300933 TTC38Q5R3I4 469 aa25■■□□□ 1.59
TPM4-201ENST00000300933 DGKHQ86XP1 1220 aa25■■□□□ 1.59
TPM4-201ENST00000300933 CLEC10AQ8IUN9 316 aa25■■□□□ 1.59
TPM4-201ENST00000300933 CERS5Q8N5B7 392 aa25■■□□□ 1.59
TPM4-201ENST00000300933 EYA3Q99504 573 aa25■■□□□ 1.59
TPM4-201ENST00000300933 HSD3B7Q9H2F3 369 aa25■■□□□ 1.59
TPM4-201ENST00000300933 BRMS1Q9HCU9 246 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms