RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 CDK11BP21127 795 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 FXR1P51114 621 aaKnown RBP eCLIP13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 ERVK-24P63145 666 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 ZNF384Q8TF68 577 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 WASF1Q92558 559 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 NAA15Q9BXJ9 866 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 CCDC151A5D8V7 595 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 NRDCO43847 1150 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 TFRCP02786 760 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 RNF26Q9BY78 433 aaPredicted RBP13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 AKR1B15C9JRZ8 316 aaPredicted RBP13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 SLC20A2Q08357 652 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 SMC1AQ14683 1233 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 RTN1Q16799 776 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 PDXDC2PQ6P474 469 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 RASSF8Q8NHQ8 419 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 PSD3Q9NYI0 1048 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 SLAIN2Q9P270 581 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 RTL9Q8NET4 1388 aa13.6□□□□□ -0.23
SEC61A1-201ENST00000243253 COL16A1Q07092 1604 aaPredicted RBP13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 ERVV-1B6SEH8 477 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 OAS2P29728 719 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 STX17P56962 302 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 CPLX2Q6PUV4 134 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 SRGAP1Q7Z6B7 1085 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 ZNF654Q8IZM8 581 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 ZNF804BA4D1E1 1349 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 KANK3Q6NY19 840 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 MNS1Q8NEH6 495 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 AK7Q96M32 723 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 ARGLU1Q9NWB6 273 aaPredicted RBP13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 SBF2Q86WG5 1849 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 AFMP43652 599 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 LONRF2Q1L5Z9 754 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 MFSD6Q6ZSS7 791 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 CABP5Q9NP86 173 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 LIMA1Q9UHB6 759 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 L1RE1Q9UN81 338 aa13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 REXO2Q9Y3B8 237 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-201ENST00000243253 CCDC66A2RUB6 948 aa13.58□□□□□ -0.23
SEC61A1-201ENST00000243253 RIOK1Q9BRS2 568 aaKnown RBP13.58□□□□□ -0.23
SEC61A1-201ENST00000243253 CDK5RAP2Q96SN8 1893 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 ERICH4A6NGS2 130 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 TROAPQ12815 778 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 KARSQ15046 597 aaKnown RBP13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 SYMPKQ92797 1274 aaKnown RBP13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 GSDMAQ96QA5 445 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 DACH1Q9UI36 760 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 ZC3H4Q9UPT8 1303 aaKnown RBP13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 ZNF831Q5JPB2 1677 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 CCDC175P0C221 793 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 WTAPQ15007 396 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 IRF2BP1Q8IU81 584 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 C4orf32Q8N8J7 132 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 ENAHQ8N8S7 591 aaPredicted RBP13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 GOLGA1Q92805 767 aa13.58□□□□□ -0.24
SEC61A1-201ENST00000243253 CASP14P31944 242 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 GYG1P46976 350 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 PLIN2Q99541 437 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 CDC23Q9UJX2 597 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 NIP7Q9Y221 180 aaKnown RBP eCLIP13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 SYNRGQ9UMZ2 1314 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 PRPF3O43395 683 aaKnown RBP13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 ERCC3P19447 782 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 ATP2C1P98194 919 aaPredicted RBP13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 BRD3Q15059 726 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 IQUBQ8NA54 791 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 SLC4A4Q9Y6R1 1079 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 GNAT2P19087 354 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 PPARAQ07869 468 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 IGSF22Q8N9C0 903 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 NEK11Q8NG66 645 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 HOOK1Q9UJC3 728 aaKnown RBP13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 MAPK8IP1Q9UQF2 711 aa13.57□□□□□ -0.24
SEC61A1-201ENST00000243253 FAM170AA1A519 330 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 TFCP2L1Q9NZI6 479 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 COL14A1Q05707 1796 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 TMTC2Q8N394 836 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 ABHD10Q9NUJ1 306 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 CALCOCO1Q9P1Z2 691 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 EXOC5O00471 708 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 PLEKHA8P1O95397 391 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 CHMP4BP1P59074 171 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 AKAP17AQ02040 695 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 EVX2Q03828 476 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 CCDC12Q8WUD4 166 aaPredicted RBP13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 CCDC34Q96HJ3 373 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 ARFGAP3Q9NP61 516 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 VPS54Q9P1Q0 977 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 ADAM21Q9UKJ8 722 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 TNKSO95271 1327 aa13.56□□□□□ -0.24
SEC61A1-201ENST00000243253 CCDC88AQ3V6T2 1871 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 GYS2P54840 703 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 MAP3K12Q12852 859 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 TEX35Q5T0J7 233 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 SUSD4Q5VX71 490 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 LZTFL1Q9NQ48 299 aa13.55□□□□□ -0.24
SEC61A1-201ENST00000243253 CNTNAP5Q8WYK1 1306 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms