RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 NPY5RQ15761 445 aa25.52■■□□□ 1.68
GCA-201ENST00000233612 CEP95Q96GE4 821 aa25.52■■□□□ 1.68
GCA-201ENST00000233612 MTMR4Q9NYA4 1195 aa25.52■■□□□ 1.68
GCA-201ENST00000233612 STAG2Q8N3U4 1231 aa25.52■■□□□ 1.68
GCA-201ENST00000233612 TNFRSF25Q93038 417 aa25.52■■□□□ 1.68
GCA-201ENST00000233612 SHMT1P34896 483 aa25.51■■□□□ 1.67
GCA-201ENST00000233612 NR5A1Q13285 461 aa25.51■■□□□ 1.67
GCA-201ENST00000233612 CAMK4Q16566 473 aa25.51■■□□□ 1.67
GCA-201ENST00000233612 OXER1Q8TDS5 423 aa25.51■■□□□ 1.67
GCA-201ENST00000233612 CCDC17Q96LX7 622 aa25.51■■□□□ 1.67
GCA-201ENST00000233612 BRMS1Q9HCU9 246 aa25.51■■□□□ 1.67
GCA-201ENST00000233612 GREB1LQ9C091 1923 aaPredicted RBP25.51■■□□□ 1.67
GCA-201ENST00000233612 VIL1P09327 827 aaKnown RBP25.5■■□□□ 1.67
GCA-201ENST00000233612 PPP4R3BQ5MIZ7 849 aa25.5■■□□□ 1.67
GCA-201ENST00000233612 SPZ1Q9BXG8 430 aa25.5■■□□□ 1.67
GCA-201ENST00000233612 MTFR1LQ9H019 292 aa25.5■■□□□ 1.67
GCA-201ENST00000233612 PIM2Q9P1W9 311 aa25.5■■□□□ 1.67
GCA-201ENST00000233612 FAM198AQ9UFP1 575 aa25.5■■□□□ 1.67
GCA-201ENST00000233612 KINO60870 393 aaKnown RBP25.49■■□□□ 1.67
GCA-201ENST00000233612 CUTAO60888 179 aa25.49■■□□□ 1.67
GCA-201ENST00000233612 RSBN1LQ6PCB5 846 aaPredicted RBP25.49■■□□□ 1.67
GCA-201ENST00000233612 METTL16Q86W50 562 aaKnown RBP25.49■■□□□ 1.67
GCA-201ENST00000233612 PDLIM2Q96JY6 352 aa25.49■■□□□ 1.67
GCA-201ENST00000233612 GMLQ99445 158 aa25.49■■□□□ 1.67
GCA-201ENST00000233612 COL2A1P02458 1487 aaPredicted RBP25.49■■□□□ 1.67
GCA-201ENST00000233612 hCG_1642624A0A1W2PR95 340 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 ENTPD3O75355 529 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 AKR1B1P15121 316 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 FOXP4Q8IVH2 680 aaPredicted RBP25.48■■□□□ 1.67
GCA-201ENST00000233612 PI4KBQ9UBF8 816 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 CEP131Q9UPN4 1083 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 BAZ2BQ9UIF8 2168 aaKnown RBP25.48■■□□□ 1.67
GCA-201ENST00000233612 CALML3P27482 149 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 TYRO3Q06418 890 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 SLC35G1Q2M3R5 365 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 ZFPM1Q8IX07 1006 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 TIGD1Q96MW7 591 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 HPSEQ9Y251 543 aa25.48■■□□□ 1.67
GCA-201ENST00000233612 SIPA1L1O43166 1804 aa25.47■■□□□ 1.67
GCA-201ENST00000233612 CYTH3O43739 400 aa25.47■■□□□ 1.67
GCA-201ENST00000233612 CAVIN2O95810 425 aa25.47■■□□□ 1.67
GCA-201ENST00000233612 PARP1P09874 1014 aaKnown RBP25.47■■□□□ 1.67
GCA-201ENST00000233612 SNHG28P0DPA3 235 aa25.47■■□□□ 1.67
GCA-201ENST00000233612 NDUFA8P51970 172 aa25.47■■□□□ 1.67
GCA-201ENST00000233612 RBM5P52756 815 aaKnown RBP eCLIP25.47■■□□□ 1.67
GCA-201ENST00000233612 GALNT17Q6IS24 598 aa25.47■■□□□ 1.67
GCA-201ENST00000233612 RNF214Q8ND24 703 aa25.47■■□□□ 1.67
GCA-201ENST00000233612 CABP5Q9NP86 173 aa25.47■■□□□ 1.67
GCA-201ENST00000233612 PCDHAC2Q9Y5I4 1007 aa25.47■■□□□ 1.67
GCA-201ENST00000233612 ATRNL1Q5VV63 1379 aa25.47■■□□□ 1.67
GCA-201ENST00000233612 A0A1B0GVL5 298 aa25.46■■□□□ 1.67
GCA-201ENST00000233612 KLRF2D3W0D1 207 aa25.46■■□□□ 1.67
GCA-201ENST00000233612 POLD1P28340 1107 aa25.46■■□□□ 1.67
GCA-201ENST00000233612 MARCKSP29966 332 aaPredicted RBP25.46■■□□□ 1.67
GCA-201ENST00000233612 CFAP100Q494V2 611 aa25.46■■□□□ 1.67
GCA-201ENST00000233612 LARGE2Q8N3Y3 721 aa25.46■■□□□ 1.67
GCA-201ENST00000233612 ZNF579Q8NAF0 562 aaKnown RBP25.46■■□□□ 1.67
GCA-201ENST00000233612 TTLL1O95922 423 aa25.45■■□□□ 1.67
GCA-201ENST00000233612 PTPREP23469 700 aa25.45■■□□□ 1.67
GCA-201ENST00000233612 RESP18Q5W5W9 173 aa25.45■■□□□ 1.67
GCA-201ENST00000233612 CKAP2LQ8IYA6 745 aa25.45■■□□□ 1.67
GCA-201ENST00000233612 KRI1Q8N9T8 703 aaKnown RBP25.45■■□□□ 1.67
GCA-201ENST00000233612 MRVI1Q9Y6F6 885 aa25.45■■□□□ 1.67
GCA-201ENST00000233612 BMP15O95972 392 aa25.45■■□□□ 1.66
GCA-201ENST00000233612 TRAPPC10P48553 1259 aa25.45■■□□□ 1.66
GCA-201ENST00000233612 NLRP5P59047 1200 aa25.45■■□□□ 1.66
GCA-201ENST00000233612 TATDN1Q6P1N9 297 aa25.45■■□□□ 1.66
GCA-201ENST00000233612 SHC4Q6S5L8 630 aa25.45■■□□□ 1.66
GCA-201ENST00000233612 SASS6Q6UVJ0 657 aa25.45■■□□□ 1.66
GCA-201ENST00000233612 SH3BP5LQ7L8J4 393 aa25.45■■□□□ 1.66
GCA-201ENST00000233612 BRCA1P38398 1863 aaKnown RBP25.44■■□□□ 1.66
GCA-201ENST00000233612 DDTLA6NHG4 134 aaPredicted RBP25.44■■□□□ 1.66
GCA-201ENST00000233612 ZBTB7AO95365 584 aa25.44■■□□□ 1.66
GCA-201ENST00000233612 VEGFAP15692 232 aaPredicted RBP25.44■■□□□ 1.66
GCA-201ENST00000233612 DAGLBQ8NCG7 672 aa25.44■■□□□ 1.66
GCA-201ENST00000233612 PRMT6Q96LA8 375 aaPredicted RBP25.44■■□□□ 1.66
GCA-201ENST00000233612 DNAJC18Q9H819 358 aa25.44■■□□□ 1.66
GCA-201ENST00000233612 ZNRF3Q9ULT6 936 aa25.44■■□□□ 1.66
GCA-201ENST00000233612 NOL7Q9UMY1 257 aaKnown RBP25.44■■□□□ 1.66
GCA-201ENST00000233612 PCDHB6Q9Y5E3 794 aa25.44■■□□□ 1.66
GCA-201ENST00000233612 COL4A5P29400 1685 aa25.44■■□□□ 1.66
GCA-201ENST00000233612 ZNF202O95125 648 aa25.43■■□□□ 1.66
GCA-201ENST00000233612 PDHBP11177 359 aa25.43■■□□□ 1.66
GCA-201ENST00000233612 PFKFB1P16118 471 aa25.43■■□□□ 1.66
GCA-201ENST00000233612 RIOX1Q9H6W3 641 aa25.43■■□□□ 1.66
GCA-201ENST00000233612 ZNF277Q9NRM2 450 aaPredicted RBP25.43■■□□□ 1.66
GCA-201ENST00000233612 BARHL2Q9NY43 387 aa25.43■■□□□ 1.66
GCA-201ENST00000233612 FBXO2Q9UK22 296 aaPredicted RBP25.43■■□□□ 1.66
GCA-201ENST00000233612 SRPRBQ9Y5M8 271 aaKnown RBP25.43■■□□□ 1.66
GCA-201ENST00000233612 TRIM75PA6NK02 468 aa25.42■■□□□ 1.66
GCA-201ENST00000233612 ASPRV1Q53RT3 343 aa25.42■■□□□ 1.66
GCA-201ENST00000233612 EARS2Q5JPH6 523 aaKnown RBP25.42■■□□□ 1.66
GCA-201ENST00000233612 ELOA2Q8IYF1 753 aaPredicted RBP25.42■■□□□ 1.66
GCA-201ENST00000233612 AGBL3Q8NEM8 1001 aa25.42■■□□□ 1.66
GCA-201ENST00000233612 CCDC148Q8NFR7 591 aa25.42■■□□□ 1.66
GCA-201ENST00000233612 FAM200AQ8TCP9 573 aa25.42■■□□□ 1.66
GCA-201ENST00000233612 MKL1Q969V6 931 aa25.42■■□□□ 1.66
GCA-201ENST00000233612 TDRD3Q9H7E2 651 aaKnown RBP25.42■■□□□ 1.66
GCA-201ENST00000233612 HDAC9Q9UKV0 1011 aa25.42■■□□□ 1.66
GCA-201ENST00000233612 PCDHA4Q9UN74 947 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms