RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 TNNC2P02585 160 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 ALAS1P13196 640 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 ATF7P17544 494 aaPredicted RBP12.28□□□□□ -0.44
KNOP1-201ENST00000219837 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 TRIM50Q86XT4 487 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 RBSNQ9H1K0 784 aa12.28□□□□□ -0.44
KNOP1-201ENST00000219837 IBTKQ9P2D0 1353 aaPredicted RBP12.28□□□□□ -0.44
KNOP1-201ENST00000219837 HGSO14964 777 aaPredicted RBP12.27□□□□□ -0.44
KNOP1-201ENST00000219837 CEP104O60308 925 aa12.27□□□□□ -0.44
KNOP1-201ENST00000219837 RLBP1P12271 317 aa12.27□□□□□ -0.44
KNOP1-201ENST00000219837 SLC12A2P55011 1212 aa12.27□□□□□ -0.44
KNOP1-201ENST00000219837 FANCCQ00597 558 aa12.27□□□□□ -0.44
KNOP1-201ENST00000219837 TRIM56Q9BRZ2 755 aaKnown RBP12.27□□□□□ -0.44
KNOP1-201ENST00000219837 VPS37BQ9H9H4 285 aa12.27□□□□□ -0.44
KNOP1-201ENST00000219837 GNPTABQ3T906 1256 aa12.27□□□□□ -0.44
KNOP1-201ENST00000219837 C4orf50Q6ZRC1 276 aa12.27□□□□□ -0.44
KNOP1-201ENST00000219837 CCDC105Q8IYK2 499 aa12.27□□□□□ -0.44
KNOP1-201ENST00000219837 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.27□□□□□ -0.44
KNOP1-201ENST00000219837 K7ENM7 598 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 DIS3L2Q8IYB7 885 aaKnown RBP12.27□□□□□ -0.45
KNOP1-201ENST00000219837 KIF9Q9HAQ2 790 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 KAT6BQ8WYB5 2073 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 CFAP43Q8NDM7 1665 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 EVCP57679 992 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 SDCCAG8Q86SQ7 713 aaPredicted RBP12.27□□□□□ -0.45
KNOP1-201ENST00000219837 GPBP1Q86WP2 473 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 CMTR1Q8N1G2 835 aaKnown RBP12.27□□□□□ -0.45
KNOP1-201ENST00000219837 PPFIBP2Q8ND30 876 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 INTS4Q96HW7 963 aaKnown RBP12.27□□□□□ -0.45
KNOP1-201ENST00000219837 RAB20Q9NX57 234 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 PBRM1Q86U86 1689 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 POLR2MP0CAP2 368 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 PNOCQ13519 176 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 CCDC62Q6P9F0 684 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 CEP120Q8N960 986 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 ST7Q9NRC1 585 aa12.27□□□□□ -0.45
KNOP1-201ENST00000219837 EDC4Q6P2E9 1401 aaKnown RBP12.27□□□□□ -0.45
KNOP1-201ENST00000219837 CAPN9O14815 690 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 LONRF2Q1L5Z9 754 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 TYW1BQ6NUM6 668 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 PLCB1Q9NQ66 1216 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 TECP42680 631 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 KLHL30Q0D2K2 578 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 MAP7Q14244 749 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 ZBTB8OSQ8IWT0 167 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 ARHGEF2Q92974 986 aaKnown RBP12.26□□□□□ -0.45
KNOP1-201ENST00000219837 PLEKHA4Q9H4M7 779 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 ZBTB40Q9NUA8 1239 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 PRR16Q569H4 304 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 LRRC47Q8N1G4 583 aaKnown RBP12.26□□□□□ -0.45
KNOP1-201ENST00000219837 ORAI2Q96SN7 254 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 PSMB7Q99436 277 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 PANK4Q9NVE7 773 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 NOC2LQ9Y3T9 749 aaKnown RBP12.26□□□□□ -0.45
KNOP1-201ENST00000219837 ABCC10Q5T3U5 1492 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 PIK3CAP42336 1068 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 ARFGAP2Q8N6H7 521 aa12.26□□□□□ -0.45
KNOP1-201ENST00000219837 MGARPQ8TDB4 240 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 TBC1D22AQ8WUA7 517 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 CHURC1Q8WUH1 139 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 ZSCAN10Q96SZ4 725 aaPredicted RBP12.25□□□□□ -0.45
KNOP1-201ENST00000219837 NBPF3Q9H094 633 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 ARHGEF10O15013 1369 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 SYNJ2BP-COX16A0A087WUM0 186 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 ZNF202O95125 648 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 PLCB4Q15147 1175 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 LGSNQ5TDP6 509 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 U2AF1L4Q8WU68 220 aaKnown RBP12.25□□□□□ -0.45
KNOP1-201ENST00000219837 SCYL1Q96KG9 808 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 COX16Q9P0S2 106 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 DDX25Q9UHL0 483 aaKnown RBP12.25□□□□□ -0.45
KNOP1-201ENST00000219837 SEPT6Q14141 434 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 MFSD14BQ5SR56 506 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 KRBA2Q6ZNG9 492 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 APOL6Q9BWW8 343 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 ZKSCAN5Q9Y2L8 839 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 GNA14O95837 355 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 XKR9Q5GH70 373 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 PALM2Q8IXS6 379 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 KRT12Q99456 494 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 TNFAIP1Q13829 316 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.25□□□□□ -0.45
KNOP1-201ENST00000219837 ANKFY1Q9P2R3 1169 aa12.25□□□□□ -0.45
KNOP1-201ENST00000219837 PLXNC1O60486 1568 aa12.24□□□□□ -0.45
KNOP1-201ENST00000219837 PPEF1O14829 653 aaPredicted RBP12.24□□□□□ -0.45
KNOP1-201ENST00000219837 DIXDC1Q155Q3 683 aa12.24□□□□□ -0.45
KNOP1-201ENST00000219837 CERKLQ49MI3 558 aaPredicted RBP12.24□□□□□ -0.45
KNOP1-201ENST00000219837 NXNQ6DKJ4 435 aa12.24□□□□□ -0.45
KNOP1-201ENST00000219837 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
KNOP1-201ENST00000219837 OTUD7AQ8TE49 926 aaPredicted RBP12.24□□□□□ -0.45
KNOP1-201ENST00000219837 TEKT3Q9BXF9 490 aa12.24□□□□□ -0.45
KNOP1-201ENST00000219837 THRAP3Q9Y2W1 955 aaKnown RBP12.24□□□□□ -0.45
KNOP1-201ENST00000219837 AOX1Q06278 1338 aa12.24□□□□□ -0.45
KNOP1-201ENST00000219837 E7EWF7 191 aa12.24□□□□□ -0.45
KNOP1-201ENST00000219837 SF3A3Q12874 501 aaKnown RBP eCLIP12.24□□□□□ -0.455e-7■■■□□ 14.8
KNOP1-201ENST00000219837 PABPC4Q13310 644 aaKnown RBP eCLIP12.24□□□□□ -0.459e-6■■■■□ 24.7
KNOP1-201ENST00000219837 MRPL11Q9Y3B7 192 aaKnown RBP12.24□□□□□ -0.45
KNOP1-201ENST00000219837 PCDHB13Q9Y5F0 798 aa12.24□□□□□ -0.45
KNOP1-201ENST00000219837 UNC13AQ9UPW8 1703 aa12.24□□□□□ -0.45
KNOP1-201ENST00000219837 CASQ2O14958 399 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms