RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Tdo2P48776 406 aa17.69■□□□□ 0.42
Vcan-201ENSMUST00000109543 Gabpb2P81069 414 aa17.69■□□□□ 0.42
Vcan-201ENSMUST00000109543 Slc9a1Q61165 820 aa17.69■□□□□ 0.42
Vcan-201ENSMUST00000109543 Zfp251Q6PCX8 632 aa17.69■□□□□ 0.42
Vcan-201ENSMUST00000109543 Hps4Q99KG7 671 aa17.69■□□□□ 0.42
Vcan-201ENSMUST00000109543 Gnl2Q99LH1 728 aaKnown RBP17.69■□□□□ 0.42
Vcan-201ENSMUST00000109543 UvssaQ9D479 717 aa17.69■□□□□ 0.42
Vcan-201ENSMUST00000109543 Cd2apQ9JLQ0 637 aa17.69■□□□□ 0.42
Vcan-201ENSMUST00000109543 Rbm6S4R1W5 1118 aaKnown RBP17.69■□□□□ 0.42
Vcan-201ENSMUST00000109543 Chd5A2A8L1 1946 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 Cyp2j7A0A140T8U1 504 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 Irf5P56477 497 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 Anks1bQ8BIZ1 1259 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 Brms1Q99N20 246 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 Scrn1Q9CZC8 414 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 Sgpp1Q9JI99 430 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 Jag1Q9QXX0 1218 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 Ccdc88aQ5SNZ0 1873 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 Myh7bA2AQP0 1941 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 CluhQ5SW19 1315 aa17.68■□□□□ 0.42
Vcan-201ENSMUST00000109543 Adssl1P28650 457 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 AsnsQ61024 561 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 Slc51aQ8R000 340 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 LpxnQ99N69 386 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 Tex13cD3YU32 604 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 GnaqP21279 359 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 Usp5P56399 858 aaKnown RBP17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 Tmed8Q3UHI4 326 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 L1td1Q587J6 782 aaKnown RBP17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 Dpf2Q61103 391 aaKnown RBP17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 E2f4Q8R0K9 410 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 Cdk8Q8R3L8 464 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 Mical1Q8VDP3 1048 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 Gdf11Q9Z1W4 405 aa17.67■□□□□ 0.42
Vcan-201ENSMUST00000109543 Eya3P97480 510 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Pip5kl1Q6U7H8 395 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Ankrd13aQ80UP5 588 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Kctd3Q8BFX3 815 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Nat10Q8K224 1024 aaKnown RBP17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Washc1Q8VDD8 475 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Elf2Q9JHC9 593 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Rsph10bE9PYQ0 876 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Gm5134E9QAB5 671 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Nap1l2P51860 460 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Ankrd40Q5SUE8 363 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Tacc1Q6Y685 774 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Frat2Q8K025 231 aa17.66■□□□□ 0.42
Vcan-201ENSMUST00000109543 Cul4bA2A432 970 aaKnown RBP17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Palm3A2TJV2 734 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Alppl2P24823 529 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Ift88Q61371 824 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Taf6lQ8R2K4 616 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Tgs1Q923W1 853 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Grem2O88273 168 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Kcna1P16388 495 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Nr5a1P33242 462 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Eif5P59325 429 aaKnown RBP17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Dok7Q18PE0 504 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Specc1lQ2KN98 1118 aaKnown RBP17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 1810065E05RikQ5NC41 235 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Tbx2Q60707 711 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Glg1Q61543 1175 aaKnown RBP17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Gys2Q8VCB3 704 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 ParnQ8VDG3 624 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Psmd10Q9Z2X2 231 aa17.65■□□□□ 0.42
Vcan-201ENSMUST00000109543 Samsn1P57725 372 aa17.64■□□□□ 0.41
Vcan-201ENSMUST00000109543 Sval3Q76I99 144 aa17.64■□□□□ 0.41
Vcan-201ENSMUST00000109543 OplahQ8K010 1288 aa17.64■□□□□ 0.41
Vcan-201ENSMUST00000109543 Nr2e3Q9QXZ7 395 aa17.64■□□□□ 0.41
Vcan-201ENSMUST00000109543 Mns1Q61884 491 aa17.64■□□□□ 0.41
Vcan-201ENSMUST00000109543 Zfp397Q7TNK4 527 aa17.64■□□□□ 0.41
Vcan-201ENSMUST00000109543 Brd3Q8K2F0 726 aaKnown RBP17.64■□□□□ 0.41
Vcan-201ENSMUST00000109543 Tfap4Q9JIZ5 338 aa17.64■□□□□ 0.41
Vcan-201ENSMUST00000109543 Zscan18E9PUD6 809 aa17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Ccdc121E9Q6D3 323 aa17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Nsrp1Q5NCR9 542 aa17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Mxd3Q80US8 206 aa17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 LRWD1Q8BUI3 648 aaKnown RBP17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Pspc1Q8R326 523 aaKnown RBP17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Mtfr1lQ9CWE0 289 aa17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Thap2Q9D305 217 aa17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Aco1P28271 889 aaKnown RBP17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Adck2Q6NSR3 617 aa17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Sugp2Q8CH09 1067 aa17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Gtf2iQ9ESZ8 998 aaKnown RBP17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Homer1Q9Z2Y3 366 aa17.63■□□□□ 0.41
Vcan-201ENSMUST00000109543 Ltbp2O08999 1813 aa17.62■□□□□ 0.41
Vcan-201ENSMUST00000109543 MeiocA2AG06 965 aa17.62■□□□□ 0.41
Vcan-201ENSMUST00000109543 Serpina16D3Z660 418 aa17.62■□□□□ 0.41
Vcan-201ENSMUST00000109543 Tmem132bF7BAB2 1078 aa17.62■□□□□ 0.41
Vcan-201ENSMUST00000109543 RragbQ6NTA4 374 aa17.62■□□□□ 0.41
Vcan-201ENSMUST00000109543 DaglaQ6WQJ1 1044 aa17.62■□□□□ 0.41
Vcan-201ENSMUST00000109543 Abcb6Q9DC29 842 aa17.62■□□□□ 0.41
Vcan-201ENSMUST00000109543 Sel1lQ9Z2G6 790 aa17.62■□□□□ 0.41
Vcan-201ENSMUST00000109543 Btn2a2A4QPC6 514 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Terf1P70371 421 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Pcsk7Q61139 770 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 GypcQ78HU7 95 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Arl8aQ8VEH3 186 aa17.61■□□□□ 0.41
Vcan-201ENSMUST00000109543 Tc2nQ91XT6 489 aa17.61■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 74.9 ms