RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Csf1rP09581 977 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Gzf1Q4VBD9 706 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Rrp12Q6P5B0 1295 aaKnown RBP17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 KhnynQ80U38 671 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 SpidrQ8BGX7 933 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Tmem60Q8K174 133 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Plekhg6Q8R0J1 787 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Trmt112Q9DCG9 125 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Cnpy2Q9QXT0 182 aa17.04■□□□□ 0.32
Trim11-203ENSMUST00000108810 Zfp853A0A1D5RM95 733 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Ces1aE9PYP1 563 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Nfil3O08750 462 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Cavin1O54724 392 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Mboat4P0C7A3 435 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 SsbP32067 415 aaKnown RBP17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Nod2Q8K3Z0 1020 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Lzts2Q91YU6 671 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Vps16Q920Q4 839 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Tlcd1Q99JT6 247 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Cyp26c1B2RXA7 518 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Kcna1P16388 495 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Tpm3P21107 285 aaKnown RBP17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Nbr1P97432 988 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Pex1Q5BL07 1284 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Grm4Q68EF4 912 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Ankrd1Q9CR42 319 aa17.03■□□□□ 0.32
Trim11-203ENSMUST00000108810 Gtf2f1Q3THK3 508 aaKnown RBP17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 MpndQ3TV65 487 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 Slc9a1Q61165 820 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 Scnn1aQ61180 699 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 CrkQ64010 304 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 Lca5Q80ST9 704 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 Kctd3Q8BFX3 815 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 Ints4Q8CIM8 964 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 Mtmr4Q91XS1 1190 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 Calml3Q9D6P8 149 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 Znf287Q9EQB9 759 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 Myh7bA2AQP0 1941 aa17.02■□□□□ 0.32
Trim11-203ENSMUST00000108810 Cdc27A2A6Q5 825 aa17.02■□□□□ 0.31
Trim11-203ENSMUST00000108810 1700003F12RikA2AKE5 210 aa17.02■□□□□ 0.31
Trim11-203ENSMUST00000108810 Api5O35841 504 aaKnown RBP17.02■□□□□ 0.31
Trim11-203ENSMUST00000108810 Aco1P28271 889 aaKnown RBP17.02■□□□□ 0.31
Trim11-203ENSMUST00000108810 Cnnm4Q69ZF7 771 aa17.02■□□□□ 0.31
Trim11-203ENSMUST00000108810 Ano6Q6P9J9 911 aa17.02■□□□□ 0.31
Trim11-203ENSMUST00000108810 Tfap4Q9JIZ5 338 aa17.02■□□□□ 0.31
Trim11-203ENSMUST00000108810 Dctpp1Q9QY93 170 aa17.02■□□□□ 0.31
Trim11-203ENSMUST00000108810 Pitpnm2Q6ZPQ6 1335 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 A0A0U1RNP2 1173 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 Map3k12Q60700 888 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 Kiaa1524Q8BWY9 907 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 Ipo4Q8VI75 1082 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 Ripk4Q9ERK0 786 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 Atp12aQ9Z1W8 1035 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 Cdh15P33146 784 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 ErfeQ6PGN1 340 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 LRWD1Q8BUI3 648 aaKnown RBP17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 Yipf1Q91VU1 306 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 Lmbr1Q9JIT0 490 aa17.01■□□□□ 0.31
Trim11-203ENSMUST00000108810 Btn2a2A4QPC6 514 aa17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Lilrb3P97484 841 aa17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Ncbp1Q3UYV9 790 aaKnown RBP17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Luc7l2Q7TNC4 392 aaKnown RBP17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Dpp8Q80YA7 892 aa17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Dlg1Q811D0 905 aaKnown RBP17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Pdcl3Q8BVF2 240 aa17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Nat10Q8K224 1024 aaKnown RBP17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Tubgcp2Q921G8 905 aa17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Col2a1P28481 1487 aa17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Bcorl1A2AQH4 1781 aa17■□□□□ 0.31
Trim11-203ENSMUST00000108810 Pabpc1lA2A5N3 607 aaKnown RBP16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Arid4aF8VPQ2 1261 aaKnown RBP16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Lmnb1P14733 588 aaKnown RBP16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Glra4Q61603 456 aa16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Hdac4Q6NZM9 1076 aa16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Gpr101Q80T62 511 aa16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Ppp1r11Q8K1L5 131 aa16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Scrn1Q9CZC8 414 aa16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Sept14Q9DA97 430 aa16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Gm5114W4VSN8 858 aa16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Tbc1d2B1AVH7 922 aa16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 LdhaP06151 332 aaKnown RBP16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 CebpzP53569 1052 aaKnown RBP16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Ddx31Q6NZQ2 687 aaKnown RBP16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Clic6Q8BHB9 596 aa16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 IarsQ8BU30 1262 aa16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Zswim8Q3UHH1 1832 aaKnown RBP16.99■□□□□ 0.31
Trim11-203ENSMUST00000108810 Zkscan4Q5SZT6 480 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Slu7Q8BHJ9 585 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Xpo4Q9ESJ0 1151 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Frmpd4A2AFR3 1320 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Myh14Q6URW6 2000 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Tmem132bF7BAB2 1078 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Sema3fO88632 785 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Nucb2P81117 420 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Pdzph1Q8BGR1 1238 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 E2f4Q8R0K9 410 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Trim29Q8R2Q0 587 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Nr2e3Q9QXZ7 395 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 CluhQ5SW19 1315 aa16.98■□□□□ 0.31
Trim11-203ENSMUST00000108810 Gm30191A0A0U1RNT7 187 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms