RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gm3164L7N2B9 238 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Atp6v1aP50516 617 aaKnown RBP10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gdpd4Q3TT99 632 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Magea3Q6T340 320 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ofd1Q80Z25 1017 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ift74Q8BKE9 600 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Hook3Q8BUK6 718 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Spaca7Q9D2S4 182 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Chmp5Q9D7S9 219 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Rsrc1Q9DBU6 334 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Uggt1Q6P5E4 1551 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gemin5Q8BX17 1502 aaKnown RBP10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Iqsec2Q5DU25 1478 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Rasa1E9PYG6 1038 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Rac1P63001 192 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Klra9Q2TJJ8 266 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Zscan26Q5RJ54 466 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Znf771Q8BJ90 317 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Trim14Q8BVW3 440 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Amigo3Q8C2S7 508 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ssuh2Q8C3L1 340 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ppfibp1Q8C8U0 969 aaKnown RBP10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Kctd10Q922M3 315 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Klra10Q9R1G6 266 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 AatkQ80YE4 1365 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ddit3P35639 168 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Pla2g4aP47713 748 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Anp32eP97822 260 aaKnown RBP10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Mindy4Q3UQI9 744 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 ItgaeQ60677 1167 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 SkiQ60698 725 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gpr150Q8BL07 427 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Vmn1r199Q8R280 367 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 2310003L06RikQ9CV82 495 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Trpv4Q9EPK8 871 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Tnip1Q9WUU8 647 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 SufuQ9Z0P7 484 aa10.34□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Med1Q925J9 1575 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Lmtk3Q5XJV6 1424 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Pkd2l1A2A259 760 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Dnai2A2AC93 623 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gm3264L7N2C5 238 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Plcb3P51432 1234 aaKnown RBP10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Alkbh5Q3TSG4 395 aaKnown RBP10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Map3k10Q66L42 940 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gm7247Q6UY52 187 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Asic3Q6X1Y6 530 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Usp6nlQ80XC3 819 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Cnpy2Q9QXT0 182 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Eif2ak4Q9QZ05 1648 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Zc3h13E9Q784 1729 aaKnown RBP10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Rfx8D3YU81 596 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Pnmal2G3X9N3 661 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Kdelc2G5E897 503 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Lins1Q3U1D0 764 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Arhgef18Q6P9R4 1021 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Sox11Q7M6Y2 395 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ca12Q8CI85 354 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Trem2Q99NH8 227 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Cxxc1Q9CWW7 660 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Katna1Q9WV86 491 aa10.33□□□□□ -0.76
Upf3b-201ENSMUST00000076265 ErbinQ80TH2 1402 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 PalldQ9ET54 1408 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Mroh1E0CZ22 1640 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gm3739L7N296 216 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Pfdn2O70591 154 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Esx1O88933 382 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 PlaaP27612 794 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 IppP28575 584 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Slc10a7Q5PT53 340 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 HmcesQ8R1M0 353 aaKnown RBP10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Brinp1Q920P3 760 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Asxl2Q8BZ32 1370 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gm4450E9Q007 373 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 TbcaP48428 108 aaKnown RBP10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gmeb2P58929 530 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Hsd3b4Q61767 373 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Atp4aQ64436 1033 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Slc20a2Q80UP8 656 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Bend5Q8C6D4 421 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 KinQ8K339 391 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Pof1bQ8K4L4 587 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Abhd8Q8R0P8 439 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 GrhprQ91Z53 328 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Nudt12Q9DCN1 462 aa10.32□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Pik3c2gO70167 1506 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Nxpe3B9EKK6 559 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gm3043K7N693 218 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gm3755K7N743 167 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Tgfb2P27090 414 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 GscQ02591 256 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 1700057G04RikQ3V0U0 232 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Dzip1lQ499E4 774 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ifnl2Q4VK74 193 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Gnl3lQ6PGG6 577 aaKnown RBP10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Vac14Q80WQ2 782 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Ston2Q8BZ60 895 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Mfsd6Q8CBH5 775 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Tmem63cQ8CBX0 802 aa10.31□□□□□ -0.76
Upf3b-201ENSMUST00000076265 Dmtf1Q8CE22 761 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 122.3 ms