RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	MDG1	P53885	366 aa		4	□□□□□ -1.77
TPM1	YNL079C	EAF7	P53911	425 aa	Known RBP	4	□□□□□ -1.77
TPM1	YNL079C	YNL092W	P53934	400 aa		4	□□□□□ -1.77
TPM1	YNL079C	ARO10	Q06408	635 aa		4	□□□□□ -1.77
TPM1	YNL079C	IWR1	Q07532	353 aa	Predicted RBP	4	□□□□□ -1.77
TPM1	YNL079C	ICL2	Q12031	575 aa		4	□□□□□ -1.77
TPM1	YNL079C	TAD3	Q9URQ3	322 aa		4	□□□□□ -1.77
TPM1	YNL079C	RPL7A	P05737	244 aa	Known RBP	3.99	□□□□□ -1.77
TPM1	YNL079C	MIS1	P09440	975 aa	Known RBP	3.99	□□□□□ -1.77
TPM1	YNL079C	TUB1	P09733	447 aa	Known RBP	3.99	□□□□□ -1.77
TPM1	YNL079C	FLO10	P36170	1169 aa		3.99	□□□□□ -1.77
TPM1	YNL079C	IES5	P40060	125 aa		3.99	□□□□□ -1.77
TPM1	YNL079C	RPL7B	Q12213	244 aa	Known RBP	3.99	□□□□□ -1.77
TPM1	YNL079C	NCB2	Q92317	146 aa		3.99	□□□□□ -1.77
TPM1	YNL079C	ADE3	P07245	946 aa	Known RBP	3.98	□□□□□ -1.77
TPM1	YNL079C	MSM1	P22438	575 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	RIT1	P23796	513 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	SWI4	P25302	1093 aa	Known RBP	3.98	□□□□□ -1.77
TPM1	YNL079C	PWP2	P25635	923 aa	Known RBP	3.98	□□□□□ -1.77
TPM1	YNL079C	MRPL9	P31334	269 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	VPS24	P36095	224 aa	Known RBP	3.98	□□□□□ -1.77
TPM1	YNL079C	PUG1	P40100	303 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	CAB2	P40506	365 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	YFL015C	P43578	164 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	ESF2	P53743	316 aa	Known RBP	3.98	□□□□□ -1.77
TPM1	YNL079C	WAR1	Q03631	944 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	ATG16	Q03818	150 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	CRF1	Q04930	467 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	CIA1	Q05583	330 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	CRT10	Q08226	957 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	PCL8	Q08966	492 aa		3.98	□□□□□ -1.77
TPM1	YNL079C	PDR18	P53756	1333 aa		3.97	□□□□□ -1.77
TPM1	YNL079C	AMD2	P22580	549 aa		3.97	□□□□□ -1.77
TPM1	YNL079C	DBF20	P32328	564 aa		3.97	□□□□□ -1.77
TPM1	YNL079C	PTH2	P34222	208 aa		3.97	□□□□□ -1.77
TPM1	YNL079C	ARO9	P38840	513 aa	Predicted RBP	3.97	□□□□□ -1.77
TPM1	YNL079C	VPS8	P39702	1274 aa		3.97	□□□□□ -1.77
TPM1	YNL079C	RPN11	P43588	306 aa	Known RBP	3.97	□□□□□ -1.77
TPM1	YNL079C	FMP30	Q02883	468 aa		3.97	□□□□□ -1.77
TPM1	YNL079C	ATG21	Q02887	496 aa		3.97	□□□□□ -1.77
TPM1	YNL079C	ARA2	Q04212	335 aa		3.97	□□□□□ -1.77
TPM1	YNL079C	SLK19	Q08581	821 aa	Known RBP	3.97	□□□□□ -1.77
TPM1	YNL079C	RIM15	P43565	1770 aa		3.97	□□□□□ -1.77
TPM1	YNL079C	YMR084W	A2P2R3	262 aa		3.96	□□□□□ -1.78
TPM1	YNL079C	SUP35	P05453	685 aa	Known RBP	3.96	□□□□□ -1.78
TPM1	YNL079C	BIK1	P11709	440 aa		3.96	□□□□□ -1.78
TPM1	YNL079C	YBR138C	P38277	524 aa		3.96	□□□□□ -1.78
TPM1	YNL079C	EXO1	P39875	702 aa		3.96	□□□□□ -1.78
TPM1	YNL079C	IMA1	P53051	589 aa		3.96	□□□□□ -1.78
TPM1	YNL079C	MLC1	P53141	149 aa		3.96	□□□□□ -1.78
TPM1	YNL079C	YGL082W	P53155	381 aa		3.96	□□□□□ -1.78
TPM1	YNL079C	UBP16	Q02863	499 aa		3.96	□□□□□ -1.78
TPM1	YNL079C	YML119W	Q03208	357 aa		3.96	□□□□□ -1.78
TPM1	YNL079C	FCP1	Q03254	732 aa		3.96	□□□□□ -1.78
TPM1	YNL079C	VMS1	Q04311	632 aa	Known RBP	3.96	□□□□□ -1.78
TPM1	YNL079C	LSP1	Q12230	341 aa	Known RBP	3.96	□□□□□ -1.78
TPM1	YNL079C	CHO2	P05374	869 aa	Known RBP	3.95	□□□□□ -1.78
TPM1	YNL079C	HEM1	P09950	548 aa	Predicted RBP	3.95	□□□□□ -1.78
TPM1	YNL079C	NCP1	P16603	691 aa	Known RBP	3.95	□□□□□ -1.78
TPM1	YNL079C	CLC1	P17891	233 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	KGD2	P19262	463 aa	Predicted RBP	3.95	□□□□□ -1.78
TPM1	YNL079C	CLB4	P24871	460 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	ROX1	P25042	368 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	ARP2	P32381	391 aa	Known RBP	3.95	□□□□□ -1.78
TPM1	YNL079C	GDA1	P32621	518 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	FUI1	P38196	639 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	MTG2	P38860	518 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	LNP1	P38878	278 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	RAD26	P40352	1085 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	LAS21	P40367	830 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	DJP1	P40564	432 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	OPT1	P40897	799 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	TDA10	P42938	290 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	YGL242C	P53066	181 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	YGR021W	P53212	290 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	YPL108W	Q02872	168 aa	Predicted RBP	3.95	□□□□□ -1.78
TPM1	YNL079C	RAD33	Q04231	177 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	RIM20	Q12033	661 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	SUL2	Q12325	893 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	AHA1	Q12449	350 aa	Known RBP	3.95	□□□□□ -1.78
TPM1	YNL079C	YER175W-A	Q8TGU4	54 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	Q0010	Q9ZZX9	128 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	SSK22	P25390	1331 aa	Predicted RBP	3.95	□□□□□ -1.78
TPM1	YNL079C	SAC3	P46674	1301 aa		3.95	□□□□□ -1.78
TPM1	YNL079C	RNR2	P09938	399 aa	Known RBP	3.94	□□□□□ -1.78
TPM1	YNL079C	AQY1	P0CD91	305 aa		3.94	□□□□□ -1.78
TPM1	YNL079C	YJU2	P28320	278 aa	Predicted RBP	3.94	□□□□□ -1.78
TPM1	YNL079C	RPC34	P32910	317 aa		3.94	□□□□□ -1.78
TPM1	YNL079C	AAP1	P37898	856 aa	Known RBP	3.94	□□□□□ -1.78
TPM1	YNL079C	KTR3	P38130	404 aa	Predicted RBP	3.94	□□□□□ -1.78
TPM1	YNL079C	FSH1	P38777	243 aa	Known RBP	3.94	□□□□□ -1.78
TPM1	YNL079C	NPR2	P39923	615 aa		3.94	□□□□□ -1.78
TPM1	YNL079C	ERR3	P42222	437 aa		3.94	□□□□□ -1.78
TPM1	YNL079C	BLS1	Q06071	122 aa		3.94	□□□□□ -1.78
TPM1	YNL079C	YDL242W	Q07746	117 aa		3.94	□□□□□ -1.78
TPM1	YNL079C	OSW1	Q08692	278 aa		3.94	□□□□□ -1.78
TPM1	YNL079C	LCB4	Q12246	624 aa		3.94	□□□□□ -1.78
TPM1	YNL079C	SNU66	Q12420	587 aa	Predicted RBP	3.94	□□□□□ -1.78
TPM1	YNL079C	YBR255C-A	Q3E776	120 aa		3.94	□□□□□ -1.78
TPM1	YNL079C	AI5_ALPHA	Q9ZZX1	630 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms