RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C TY2A-DR3Q99303 438 aa2.41□□□□□ -2.02
SOK2YMR016C NUP159P40477 1460 aa2.4□□□□□ -2.02
SOK2YMR016C BCK1Q01389 1478 aa2.4□□□□□ -2.02
SOK2YMR016C ARO1P08566 1588 aaKnown RBP2.4□□□□□ -2.02
SOK2YMR016C MIS1P09440 975 aaKnown RBP2.4□□□□□ -2.03
SOK2YMR016C MBR1P23493 339 aa2.4□□□□□ -2.03
SOK2YMR016C DPB3P27344 201 aa2.4□□□□□ -2.03
SOK2YMR016C YMC1P32331 307 aa2.4□□□□□ -2.03
SOK2YMR016C MRP20P32387 263 aa2.4□□□□□ -2.03
SOK2YMR016C FSH1P38777 243 aaKnown RBP2.4□□□□□ -2.03
SOK2YMR016C VPS27P40343 622 aaKnown RBP2.4□□□□□ -2.03
SOK2YMR016C PSF2P40359 213 aa2.4□□□□□ -2.03
SOK2YMR016C ESL1P40456 1118 aa2.4□□□□□ -2.03
SOK2YMR016C CAB2P40506 365 aa2.4□□□□□ -2.03
SOK2YMR016C PSA1P41940 361 aaKnown RBP2.4□□□□□ -2.03
SOK2YMR016C MEP2P41948 499 aa2.4□□□□□ -2.03
SOK2YMR016C TAX4P47030 604 aa2.4□□□□□ -2.03
SOK2YMR016C YGL117WP53133 265 aa2.4□□□□□ -2.03
SOK2YMR016C PIL1P53252 339 aaKnown RBP2.4□□□□□ -2.03
SOK2YMR016C TIM10P87108 93 aa2.4□□□□□ -2.03
SOK2YMR016C YDR179W-AQ03983 463 aa2.4□□□□□ -2.03
SOK2YMR016C IRC3Q06683 689 aa2.4□□□□□ -2.03
SOK2YMR016C YDL242WQ07746 117 aa2.4□□□□□ -2.03
SOK2YMR016C PSK2Q08217 1101 aa2.4□□□□□ -2.03
SOK2YMR016C TOP2P06786 1428 aaKnown RBP2.4□□□□□ -2.03
SOK2YMR016C YOR1P53049 1477 aa2.39□□□□□ -2.03
SOK2YMR016C CDC16P09798 840 aa2.39□□□□□ -2.03
SOK2YMR016C YJU2P28320 278 aaPredicted RBP2.39□□□□□ -2.03
SOK2YMR016C APL3P38065 1025 aa2.39□□□□□ -2.03
SOK2YMR016C NAB3P38996 802 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
SOK2YMR016C NDE1P40215 560 aa2.39□□□□□ -2.03
SOK2YMR016C IML2P47031 731 aa2.39□□□□□ -2.03
SOK2YMR016C ASN1P49089 572 aaKnown RBP2.39□□□□□ -2.03
SOK2YMR016C LYS4P49367 693 aaPredicted RBP2.39□□□□□ -2.03
SOK2YMR016C YGR250CP53316 781 aaKnown RBP2.39□□□□□ -2.03
SOK2YMR016C INN1P53901 409 aa2.39□□□□□ -2.03
SOK2YMR016C RAD33Q04231 177 aa2.39□□□□□ -2.03
SOK2YMR016C HRD3Q05787 833 aa2.39□□□□□ -2.03
SOK2YMR016C RPO21P04050 1733 aaKnown RBP2.39□□□□□ -2.03
SOK2YMR016C SSM4P40318 1319 aa2.39□□□□□ -2.03
SOK2YMR016C TPK2P06245 380 aa2.39□□□□□ -2.03
SOK2YMR016C PET122P10355 254 aa2.39□□□□□ -2.03
SOK2YMR016C CHS3P29465 1165 aa2.39□□□□□ -2.03
SOK2YMR016C GDA1P32621 518 aa2.39□□□□□ -2.03
SOK2YMR016C NFU1P32860 256 aa2.39□□□□□ -2.03
SOK2YMR016C HOT13P36078 116 aa2.39□□□□□ -2.03
SOK2YMR016C NOP16P40007 231 aaKnown RBP2.39□□□□□ -2.03
SOK2YMR016C PMT6P42934 759 aa2.39□□□□□ -2.03
SOK2YMR016C NPA3P47122 385 aa2.39□□□□□ -2.03
SOK2YMR016C NGL3Q03210 505 aa2.39□□□□□ -2.03
SOK2YMR016C TRS23Q03784 219 aa2.39□□□□□ -2.03
SOK2YMR016C ARG7Q04728 441 aa2.39□□□□□ -2.03
SOK2YMR016C OPY2Q06810 360 aa2.39□□□□□ -2.03
SOK2YMR016C YOL159CQ08300 171 aa2.39□□□□□ -2.03
SOK2YMR016C LCB4Q12246 624 aa2.39□□□□□ -2.03
SOK2YMR016C MED1Q12321 566 aa2.39□□□□□ -2.03
SOK2YMR016C MDM20Q12387 796 aaKnown RBP2.39□□□□□ -2.03
SOK2YMR016C SUI3P09064 285 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C KGD2P19262 463 aaPredicted RBP2.38□□□□□ -2.03
SOK2YMR016C SRP54P20424 541 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C ERG8P24521 451 aa2.38□□□□□ -2.03
SOK2YMR016C RER1P25560 188 aa2.38□□□□□ -2.03
SOK2YMR016C MPE1P35728 441 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C ERC1P38767 581 aa2.38□□□□□ -2.03
SOK2YMR016C YEL068CP39977 110 aa2.38□□□□□ -2.03
SOK2YMR016C SWP82P43554 623 aa2.38□□□□□ -2.03
SOK2YMR016C YSA1Q01976 231 aa2.38□□□□□ -2.03
SOK2YMR016C UBP16Q02863 499 aa2.38□□□□□ -2.03
SOK2YMR016C TMA16Q08687 178 aa2.38□□□□□ -2.03
SOK2YMR016C GPN2Q08726 347 aaPredicted RBP2.38□□□□□ -2.03
SOK2YMR016C MYO4P32492 1471 aa2.38□□□□□ -2.03
SOK2YMR016C TY1B-HO13535 1793 aa2.38□□□□□ -2.03
SOK2YMR016C TY1B-DR5P0C2I2 1755 aa2.38□□□□□ -2.03
SOK2YMR016C TY1B-DR6P0C2I3 1755 aa2.38□□□□□ -2.03
SOK2YMR016C TY1B-LR2P0C2I5 1755 aa2.38□□□□□ -2.03
SOK2YMR016C TY1B-LR3P0C2I6 1755 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C TY1B-PR1P0C2I9 1755 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C TY1B-PR2P0C2J0 1756 aa2.38□□□□□ -2.03
SOK2YMR016C TY1B-PR3P0C2J1 1755 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C TY1B-JR1P47098 1755 aa2.38□□□□□ -2.03
SOK2YMR016C TY1B-ML2Q03434 1755 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C TY1B-ER1Q03612 1755 aa2.38□□□□□ -2.03
SOK2YMR016C TY1B-ML1Q04711 1755 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C TY1B-GR2Q12269 1755 aa2.38□□□□□ -2.03
SOK2YMR016C TY1B-OLQ12273 1755 aa2.38□□□□□ -2.03
SOK2YMR016C TY1B-PLQ12414 1755 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C FUM1P08417 488 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C YPK1P12688 680 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C RNR3P21672 869 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C SEC15P22224 910 aa2.38□□□□□ -2.03
SOK2YMR016C NTH1P32356 751 aa2.38□□□□□ -2.03
SOK2YMR016C TPA1P40032 644 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C TDA10P42938 290 aa2.38□□□□□ -2.03
SOK2YMR016C RMD8P43620 662 aa2.38□□□□□ -2.03
SOK2YMR016C CBK1P53894 756 aa2.38□□□□□ -2.03
SOK2YMR016C NGL2Q03264 515 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C SPE4Q12455 300 aa2.38□□□□□ -2.03
SOK2YMR016C SEC3P33332 1336 aaKnown RBP2.38□□□□□ -2.03
SOK2YMR016C POM152P39685 1337 aa2.38□□□□□ -2.03
SOK2YMR016C AAC1P04710 309 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms