RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP40	YKR092C	SWC3	P31376	625 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	IMP2'	P32351	346 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	MEI5	P32489	222 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	SSO1	P32867	290 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	RRP1	P35178	278 aa	Predicted RBP	4.19	□□□□□ -1.74
SRP40	YKR092C	SWH1	P35845	1188 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	UIP5	P36137	443 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	COS111	P38308	924 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	CBR1	P38626	284 aa	Known RBP	4.19	□□□□□ -1.74
SRP40	YKR092C	ERC1	P38767	581 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	EMP65	P40085	556 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	YIL077C	P40508	320 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	IML2	P47031	731 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	TAF4	P50105	388 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	LSG1	P53145	640 aa	Known RBP	4.19	□□□□□ -1.74
SRP40	YKR092C	RRP46	P53256	223 aa	Predicted RBP	4.19	□□□□□ -1.74
SRP40	YKR092C	SPN1	Q06505	410 aa	Predicted RBP	4.19	□□□□□ -1.74
SRP40	YKR092C	BRX1	Q08235	291 aa	Known RBP	4.19	□□□□□ -1.74
SRP40	YKR092C	MLH3	Q12083	715 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	TAF3	Q12297	353 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	HAP1	P0CE41	1502 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	RAD9	P14737	1309 aa		4.19	□□□□□ -1.74
SRP40	YKR092C	BCK1	Q01389	1478 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	YRF1-4	O13559	1382 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	SIR4	P11978	1358 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	MLP1	Q02455	1875 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	YML133C	Q03099	1374 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	YLL067C	Q07888	1374 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	YLL066C	Q99208	1374 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	STF1	P01098	86 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	TEF1	P02994	458 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SRP40	YKR092C	COX11	P19516	300 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	PWP1	P21304	576 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	ATP12	P22135	325 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	PRD1	P25375	712 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	PAP1	P29468	568 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	ITR1	P30605	584 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	HEM12	P32347	362 aa	Predicted RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	MF(ALPHA)2	P32435	120 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	VMA8	P32610	256 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	OAR1	P35731	278 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	PSY4	P38193	441 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	YSW1	P38280	609 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	YHR033W	P38690	423 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	CTM1	P38818	585 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	ESL1	P40456	1118 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	PHB1	P40961	287 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	GCN20	P43535	752 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	SAE2	P46946	345 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	YML6	P51998	286 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	ALF1	P53904	254 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	UBX4	P54730	416 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	NSE5	Q03718	556 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	YDR286C	Q05530	114 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	YFT2	Q06676	274 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	HBT1	Q07653	1046 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	MLH2	Q07980	695 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	NGL1	Q08213	363 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	MCH5	Q08777	521 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	RKM1	Q08961	583 aa	Predicted RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	CHS5	Q12114	671 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	NYV1	Q12255	253 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	SEC39	Q12745	709 aa		4.18	□□□□□ -1.74
SRP40	YKR092C	LSO2	Q3E772	92 aa	Known RBP	4.18	□□□□□ -1.74
SRP40	YKR092C	HOM2	P13663	365 aa	Known RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	GLK1	P17709	500 aa	Known RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	VPS3	P23643	1011 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	PRE4	P30657	266 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	HXT4	P32467	576 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	NIP1	P32497	812 aa	Known RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	ECM32	P32644	1121 aa	Known RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	MRS6	P32864	603 aa	Known RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	BMH2	P34730	273 aa	Known RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	YPT53	P36019	220 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	RSM22	P36056	628 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	ECM4	P36156	370 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	MOH1	P38191	138 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	MED8	P38304	223 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	SAP1	P39955	897 aa	Known RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	PCL7	P40186	285 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	NDE1	P40215	560 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	JEM1	P40358	645 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	SGM1	P47166	707 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	RFX1	P48743	811 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	FHN1	P53279	174 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	NCS2	P53923	493 aa	Predicted RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	ARP5	P53946	755 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	HEF3	P53978	1044 aa	Known RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	LOT6	Q07923	191 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	RTC5	Q12108	567 aa	Known RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	MED1	Q12321	566 aa		4.17	□□□□□ -1.74
SRP40	YKR092C	NOT5	Q12514	560 aa	Predicted RBP	4.17	□□□□□ -1.74
SRP40	YKR092C	PGI1	P12709	554 aa	Known RBP	4.16	□□□□□ -1.74
SRP40	YKR092C	YME2	P32843	850 aa		4.16	□□□□□ -1.74
SRP40	YKR092C	RIB7	P33312	244 aa		4.16	□□□□□ -1.74
SRP40	YKR092C	SET3	P36124	751 aa		4.16	□□□□□ -1.74
SRP40	YKR092C	SRP68	P38687	599 aa	Known RBP	4.16	□□□□□ -1.74
SRP40	YKR092C	VPS45	P38932	577 aa		4.16	□□□□□ -1.74
SRP40	YKR092C	TMN3	P40071	706 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 81.7 ms