RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W AIM23P47015 356 aa5.12□□□□□ -1.59
MSH1YHR120W RFX1P48743 811 aa5.12□□□□□ -1.59
MSH1YHR120W NRD1P53617 575 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
MSH1YHR120W KTR5P53966 522 aaPredicted RBP5.12□□□□□ -1.59
MSH1YHR120W VPS9P54787 451 aa5.12□□□□□ -1.59
MSH1YHR120W PIR1Q03178 341 aa5.12□□□□□ -1.59
MSH1YHR120W HPF1Q05164 967 aa5.12□□□□□ -1.59
MSH1YHR120W VHS3Q08438 674 aa5.12□□□□□ -1.59
MSH1YHR120W EFG1Q3E705 233 aaKnown RBP5.12□□□□□ -1.59
MSH1YHR120W CLB4P24871 460 aa5.12□□□□□ -1.59
MSH1YHR120W PYC2P32327 1180 aaKnown RBP5.12□□□□□ -1.59
MSH1YHR120W TCD2P36101 447 aaKnown RBP5.12□□□□□ -1.59
MSH1YHR120W APM3P38153 483 aa5.12□□□□□ -1.59
MSH1YHR120W GIP1P38229 639 aa5.12□□□□□ -1.59
MSH1YHR120W MSR1P38714 643 aa5.12□□□□□ -1.59
MSH1YHR120W STL1P39932 569 aa5.12□□□□□ -1.59
MSH1YHR120W DLD2P46681 530 aaKnown RBP5.12□□□□□ -1.59
MSH1YHR120W YJL132WP47014 750 aa5.12□□□□□ -1.59
MSH1YHR120W RSM7P47150 247 aa5.12□□□□□ -1.59
MSH1YHR120W HLJ1P48353 224 aa5.12□□□□□ -1.59
MSH1YHR120W NUP84P52891 726 aa5.12□□□□□ -1.59
MSH1YHR120W COG6P53959 839 aa5.12□□□□□ -1.59
MSH1YHR120W PEX13P80667 386 aa5.12□□□□□ -1.59
MSH1YHR120W HOT1Q03213 719 aa5.12□□□□□ -1.59
MSH1YHR120W AFI1Q99222 893 aa5.12□□□□□ -1.59
MSH1YHR120W GCD2P12754 651 aaPredicted RBP5.11□□□□□ -1.59
MSH1YHR120W EXO70P19658 623 aa5.11□□□□□ -1.59
MSH1YHR120W PWP1P21304 576 aaKnown RBP5.11□□□□□ -1.59
MSH1YHR120W SLY1P22213 666 aa5.11□□□□□ -1.59
MSH1YHR120W ZUO1P32527 433 aaKnown RBP5.11□□□□□ -1.59
MSH1YHR120W TYE7P33122 291 aaPredicted RBP5.11□□□□□ -1.59
MSH1YHR120W TFC3P34111 1160 aa5.11□□□□□ -1.59
MSH1YHR120W ATM1P40416 690 aa5.11□□□□□ -1.59
MSH1YHR120W RRN7P40992 514 aa5.11□□□□□ -1.59
MSH1YHR120W ALY2P47029 1046 aa5.11□□□□□ -1.59
MSH1YHR120W LIA1P47120 325 aaKnown RBP5.11□□□□□ -1.59
MSH1YHR120W ASN2P49090 572 aaKnown RBP5.11□□□□□ -1.59
MSH1YHR120W ARI1P53111 347 aaKnown RBP5.11□□□□□ -1.59
MSH1YHR120W YGR127WP53275 312 aa5.11□□□□□ -1.59
MSH1YHR120W SWC7Q06707 132 aa5.11□□□□□ -1.59
MSH1YHR120W SIN4P32259 974 aa5.11□□□□□ -1.59
MSH1YHR120W PXA2P34230 853 aa5.11□□□□□ -1.59
MSH1YHR120W GIP4P39732 760 aa5.11□□□□□ -1.59
MSH1YHR120W ALA1P40825 983 aaKnown RBP5.11□□□□□ -1.59
MSH1YHR120W MKT1P40850 830 aaKnown RBP5.11□□□□□ -1.59
MSH1YHR120W TRF5P48561 642 aaKnown RBP5.11□□□□□ -1.59
MSH1YHR120W YML6P51998 286 aa5.11□□□□□ -1.59
MSH1YHR120W NPY1P53164 384 aa5.11□□□□□ -1.59
MSH1YHR120W SMA1Q02651 245 aa5.11□□□□□ -1.59
MSH1YHR120W YDR018CQ12185 396 aa5.11□□□□□ -1.59
MSH1YHR120W OCA6Q12454 224 aa5.11□□□□□ -1.59
MSH1YHR120W PEX11Q12462 236 aa5.11□□□□□ -1.59
MSH1YHR120W MRPL8P22353 238 aa5.1□□□□□ -1.59
MSH1YHR120W YME2P32843 850 aa5.1□□□□□ -1.59
MSH1YHR120W PPE1P38796 400 aa5.1□□□□□ -1.59
MSH1YHR120W PIK1P39104 1066 aa5.1□□□□□ -1.59
MSH1YHR120W AIM14P53109 570 aa5.1□□□□□ -1.59
MSH1YHR120W PRM1P53835 661 aa5.1□□□□□ -1.59
MSH1YHR120W YNL058CP53947 316 aa5.1□□□□□ -1.59
MSH1YHR120W RPL34AP87262 121 aaPredicted RBP5.1□□□□□ -1.59
MSH1YHR120W CDC73Q06697 393 aa5.1□□□□□ -1.59
MSH1YHR120W FAP7Q12055 197 aaPredicted RBP5.1□□□□□ -1.59
MSH1YHR120W AVL9Q12500 764 aa5.1□□□□□ -1.59
MSH1YHR120W ILS1P09436 1072 aaKnown RBP5.1□□□□□ -1.59
MSH1YHR120W TOA1P32773 286 aa5.1□□□□□ -1.59
MSH1YHR120W OTU2P38747 307 aaKnown RBP5.1□□□□□ -1.59
MSH1YHR120W ALG5P40350 334 aa5.1□□□□□ -1.59
MSH1YHR120W SER33P40510 469 aa5.1□□□□□ -1.59
MSH1YHR120W SEC26P41810 973 aaKnown RBP5.1□□□□□ -1.59
MSH1YHR120W MIG2P53035 382 aa5.1□□□□□ -1.59
MSH1YHR120W ERP6P53198 216 aa5.1□□□□□ -1.59
MSH1YHR120W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
MSH1YHR120W IOC2Q12072 812 aa5.1□□□□□ -1.59
MSH1YHR120W SST2P11972 698 aaKnown RBP5.1□□□□□ -1.59
MSH1YHR120W AAT2P23542 418 aaKnown RBP5.1□□□□□ -1.59
MSH1YHR120W MIH1P23748 554 aa5.1□□□□□ -1.59
MSH1YHR120W ERP5P38819 212 aa5.1□□□□□ -1.59
MSH1YHR120W JEM1P40358 645 aa5.1□□□□□ -1.59
MSH1YHR120W PFK26P40433 827 aaKnown RBP5.1□□□□□ -1.59
MSH1YHR120W GVP36P40531 326 aaKnown RBP5.1□□□□□ -1.59
MSH1YHR120W YJL107CP42947 387 aa5.1□□□□□ -1.59
MSH1YHR120W PAN2P53010 1115 aaPredicted RBP5.1□□□□□ -1.59
MSH1YHR120W YTP1P53584 459 aa5.1□□□□□ -1.59
MSH1YHR120W UBP2Q01476 1272 aa5.1□□□□□ -1.59
MSH1YHR120W CLU1Q03690 1277 aaKnown RBP5.1□□□□□ -1.59
MSH1YHR120W HMO1Q03973 246 aaKnown RBP5.1□□□□□ -1.59
MSH1YHR120W JIP5Q06214 492 aaPredicted RBP5.1□□□□□ -1.59
MSH1YHR120W COX5AP00424 153 aa5.09□□□□□ -1.59
MSH1YHR120W REC107P21651 314 aa5.09□□□□□ -1.59
MSH1YHR120W PAT1P25644 796 aaKnown RBP5.09□□□□□ -1.59
MSH1YHR120W MRS6P32864 603 aaKnown RBP5.09□□□□□ -1.59
MSH1YHR120W DIA4P38705 446 aaPredicted RBP5.09□□□□□ -1.59
MSH1YHR120W PCF11P39081 626 aaPredicted RBP5.09□□□□□ -1.59
MSH1YHR120W MND2P40577 368 aa5.09□□□□□ -1.59
MSH1YHR120W REF2P42073 533 aaPredicted RBP5.09□□□□□ -1.59
MSH1YHR120W ATG36P46983 293 aa5.09□□□□□ -1.59
MSH1YHR120W EMC4P53073 190 aa5.09□□□□□ -1.59
MSH1YHR120W NOP15P53927 220 aaPredicted RBP5.09□□□□□ -1.59
MSH1YHR120W ORC3P54790 616 aa5.09□□□□□ -1.59
MSH1YHR120W ENT5Q03769 411 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms