RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C RSC9Q03124 581 aa3.27□□□□□ -1.89
SWC4YGR002C CSR1Q06705 408 aaKnown RBP3.27□□□□□ -1.89
SWC4YGR002C VAM6Q07468 1049 aa3.27□□□□□ -1.89
SWC4YGR002C ICT1Q12385 394 aa3.27□□□□□ -1.89
SWC4YGR002C ILS1P09436 1072 aaKnown RBP3.26□□□□□ -1.89
SWC4YGR002C YMR085WP0CF18 432 aa3.26□□□□□ -1.89
SWC4YGR002C TRX2P22803 104 aaKnown RBP3.26□□□□□ -1.89
SWC4YGR002C MAK32P23060 363 aa3.26□□□□□ -1.89
SWC4YGR002C LRE1P25579 583 aaKnown RBP3.26□□□□□ -1.89
SWC4YGR002C PTC6P25646 442 aa3.26□□□□□ -1.89
SWC4YGR002C ERV46P39727 415 aa3.26□□□□□ -1.89
SWC4YGR002C SNO3P43544 222 aa3.26□□□□□ -1.89
SWC4YGR002C COG1P53079 417 aa3.26□□□□□ -1.89
SWC4YGR002C RRT6P53117 311 aaPredicted RBP3.26□□□□□ -1.89
SWC4YGR002C YGR021WP53212 290 aa3.26□□□□□ -1.89
SWC4YGR002C YNL058CP53947 316 aa3.26□□□□□ -1.89
SWC4YGR002C ADE16P54113 591 aaKnown RBP3.26□□□□□ -1.89
SWC4YGR002C ERG13P54839 491 aaKnown RBP3.26□□□□□ -1.89
SWC4YGR002C STP1Q00947 519 aa3.26□□□□□ -1.89
SWC4YGR002C LEA1Q08963 238 aaPredicted RBP3.26□□□□□ -1.89
SWC4YGR002C SWT1Q12104 458 aa3.26□□□□□ -1.89
SWC4YGR002C NOP58Q12499 511 aaKnown RBP3.26□□□□□ -1.89
SWC4YGR002C INO80P53115 1489 aa3.26□□□□□ -1.89
SWC4YGR002C SSM4P40318 1319 aa3.25□□□□□ -1.89
SWC4YGR002C CET1O13297 549 aaPredicted RBP3.25□□□□□ -1.89
SWC4YGR002C TY2A-LR1P0C2J4 438 aa3.25□□□□□ -1.89
SWC4YGR002C YML003WP0CF16 290 aa3.25□□□□□ -1.89
SWC4YGR002C TY2A-FP0CX61 438 aa3.25□□□□□ -1.89
SWC4YGR002C TY2A-GR2P0CX62 438 aa3.25□□□□□ -1.89
SWC4YGR002C TY2A-CP25383 438 aa3.25□□□□□ -1.89
SWC4YGR002C TMT1P32643 299 aa3.25□□□□□ -1.89
SWC4YGR002C PSY4P38193 441 aa3.25□□□□□ -1.89
SWC4YGR002C ERP2P39704 215 aa3.25□□□□□ -1.89
SWC4YGR002C DJP1P40564 432 aa3.25□□□□□ -1.89
SWC4YGR002C PSA1P41940 361 aaKnown RBP3.25□□□□□ -1.89
SWC4YGR002C GAT1P43574 510 aa3.25□□□□□ -1.89
SWC4YGR002C IRC7P43623 340 aa3.25□□□□□ -1.89
SWC4YGR002C PIL1P53252 339 aaKnown RBP3.25□□□□□ -1.89
SWC4YGR002C MEH1Q02205 184 aa3.25□□□□□ -1.89
SWC4YGR002C TY2A-DR2Q03483 438 aa3.25□□□□□ -1.89
SWC4YGR002C PSR2Q07949 397 aa3.25□□□□□ -1.89
SWC4YGR002C PFA4Q12006 378 aa3.25□□□□□ -1.89
SWC4YGR002C TY2A-BQ12260 438 aa3.25□□□□□ -1.89
SWC4YGR002C TY2A-OR2Q12293 438 aa3.25□□□□□ -1.89
SWC4YGR002C TY2A-DR1Q12392 438 aa3.25□□□□□ -1.89
SWC4YGR002C TY2A-OR1Q12439 438 aa3.25□□□□□ -1.89
SWC4YGR002C TY2A-DR3Q99303 438 aa3.25□□□□□ -1.89
SWC4YGR002C SUI3P09064 285 aaKnown RBP3.24□□□□□ -1.89
SWC4YGR002C PFK2P16862 959 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SWC4YGR002C YAP1P19880 650 aaKnown RBP3.24□□□□□ -1.89
SWC4YGR002C XRS2P33301 854 aa3.24□□□□□ -1.89
SWC4YGR002C TEF4P36008 412 aaKnown RBP3.24□□□□□ -1.89
SWC4YGR002C UME6P39001 836 aa3.24□□□□□ -1.89
SWC4YGR002C SEC27P41811 889 aaKnown RBP3.24□□□□□ -1.89
SWC4YGR002C IML2P47031 731 aa3.24□□□□□ -1.89
SWC4YGR002C BNA1P47096 177 aa3.24□□□□□ -1.89
SWC4YGR002C CTF18P49956 741 aa3.24□□□□□ -1.89
SWC4YGR002C YPR003CP53394 754 aa3.24□□□□□ -1.89
SWC4YGR002C CSL4P53859 292 aaPredicted RBP3.24□□□□□ -1.89
SWC4YGR002C IDP3P53982 420 aaKnown RBP3.24□□□□□ -1.89
SWC4YGR002C THI3Q07471 609 aa3.24□□□□□ -1.89
SWC4YGR002C YDL121CQ07541 149 aa3.24□□□□□ -1.89
SWC4YGR002C TMA16Q08687 178 aa3.24□□□□□ -1.89
SWC4YGR002C SPO16P17122 198 aa3.23□□□□□ -1.89
SWC4YGR002C COQ3P27680 312 aa3.23□□□□□ -1.89
SWC4YGR002C MSY1P48527 492 aa3.23□□□□□ -1.89
SWC4YGR002C ASE1P50275 885 aa3.23□□□□□ -1.89
SWC4YGR002C PSP1P50896 841 aaKnown RBP3.23□□□□□ -1.89
SWC4YGR002C REG1Q00816 1014 aa3.23□□□□□ -1.89
SWC4YGR002C VID22Q05934 901 aa3.23□□□□□ -1.89
SWC4YGR002C TFC6Q06339 672 aa3.23□□□□□ -1.89
SWC4YGR002C ATG23Q06671 453 aa3.23□□□□□ -1.89
SWC4YGR002C SWA2Q06677 668 aa3.23□□□□□ -1.89
SWC4YGR002C TRM8Q12009 286 aa3.23□□□□□ -1.89
SWC4YGR002C BAG7Q12128 409 aa3.23□□□□□ -1.89
SWC4YGR002C CRC1Q12289 327 aa3.23□□□□□ -1.89
SWC4YGR002C SNF1P06782 633 aaKnown RBP3.22□□□□□ -1.89
SWC4YGR002C PCT1P13259 424 aa3.22□□□□□ -1.89
SWC4YGR002C GUK1P15454 187 aaKnown RBP3.22□□□□□ -1.89
SWC4YGR002C YSP3P25036 478 aa3.22□□□□□ -1.89
SWC4YGR002C MSS51P32335 436 aa3.22□□□□□ -1.89
SWC4YGR002C CNS1P33313 385 aa3.22□□□□□ -1.89
SWC4YGR002C SLC1P33333 303 aa3.22□□□□□ -1.89
SWC4YGR002C IST3P40565 148 aaPredicted RBP3.22□□□□□ -1.89
SWC4YGR002C TCB2P48231 1178 aa3.22□□□□□ -1.89
SWC4YGR002C ORC5P50874 479 aa3.22□□□□□ -1.89
SWC4YGR002C YML131WQ03102 365 aa3.22□□□□□ -1.89
SWC4YGR002C FCP1Q03254 732 aa3.22□□□□□ -1.89
SWC4YGR002C APL5Q08951 932 aaKnown RBP3.22□□□□□ -1.89
SWC4YGR002C RGT2Q12300 763 aa3.22□□□□□ -1.89
SWC4YGR002C NKP1Q12493 238 aa3.22□□□□□ -1.89
SWC4YGR002C YLR302CO13544 120 aa3.21□□□□□ -1.9
SWC4YGR002C OPI1P21957 404 aa3.21□□□□□ -1.9
SWC4YGR002C RPT3P33298 428 aaKnown RBP3.21□□□□□ -1.9
SWC4YGR002C TFC3P34111 1160 aa3.21□□□□□ -1.9
SWC4YGR002C MPE1P35728 441 aaKnown RBP3.21□□□□□ -1.9
SWC4YGR002C GEX2P36173 615 aa3.21□□□□□ -1.9
SWC4YGR002C FLO5P38894 1075 aa3.21□□□□□ -1.9
SWC4YGR002C YIL024CP40543 189 aa3.21□□□□□ -1.9
SWC4YGR002C COP1P53622 1201 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms