RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W ALG2P43636 503 aa5.05□□□□□ -1.6
SPT3YDR392W STU2P46675 888 aa5.05□□□□□ -1.6
SPT3YDR392W YJR030CP47101 745 aa5.05□□□□□ -1.6
SPT3YDR392W CAF130P53280 1122 aaPredicted RBP5.05□□□□□ -1.6
SPT3YDR392W TRS130Q03660 1102 aa5.05□□□□□ -1.6
SPT3YDR392W SNU56Q03782 492 aaKnown RBP5.05□□□□□ -1.6
SPT3YDR392W RTN1Q04947 295 aaKnown RBP5.05□□□□□ -1.6
SPT3YDR392W YSH1Q06224 779 aaPredicted RBP5.05□□□□□ -1.6
SPT3YDR392W TRP4P07285 380 aaPredicted RBP5.04□□□□□ -1.6
SPT3YDR392W CDC16P09798 840 aa5.04□□□□□ -1.6
SPT3YDR392W ERG4P25340 473 aa5.04□□□□□ -1.6
SPT3YDR392W MTG2P38860 518 aa5.04□□□□□ -1.6
SPT3YDR392W ASK10P48361 1146 aa5.04□□□□□ -1.6
SPT3YDR392W MLC1P53141 149 aa5.04□□□□□ -1.6
SPT3YDR392W CSR1Q06705 408 aaKnown RBP5.04□□□□□ -1.6
SPT3YDR392W YOR387CQ08910 206 aa5.04□□□□□ -1.6
SPT3YDR392W UPC2Q12151 913 aa5.04□□□□□ -1.6
SPT3YDR392W SUC2P00724 532 aa5.03□□□□□ -1.6
SPT3YDR392W PDA1P16387 420 aaKnown RBP5.03□□□□□ -1.6
SPT3YDR392W GRR1P24814 1151 aa5.03□□□□□ -1.6
SPT3YDR392W SED4P25365 1065 aa5.03□□□□□ -1.6
SPT3YDR392W CDC12P32468 407 aaKnown RBP5.03□□□□□ -1.6
SPT3YDR392W UFE1P41834 346 aa5.03□□□□□ -1.6
SPT3YDR392W BNA3P47039 444 aaKnown RBP5.03□□□□□ -1.6
SPT3YDR392W BUL1P48524 976 aa5.03□□□□□ -1.6
SPT3YDR392W TRF5P48561 642 aaKnown RBP5.03□□□□□ -1.6
SPT3YDR392W DIP5P53388 608 aa5.03□□□□□ -1.6
SPT3YDR392W ECM22Q05958 814 aaPredicted RBP5.03□□□□□ -1.6
SPT3YDR392W MCH5Q08777 521 aa5.03□□□□□ -1.6
SPT3YDR392W SLX4Q12098 748 aa5.03□□□□□ -1.6
SPT3YDR392W ILV1P00927 576 aaKnown RBP5.02□□□□□ -1.61
SPT3YDR392W SEC63P14906 663 aa5.02□□□□□ -1.61
SPT3YDR392W COT1P32798 439 aa5.02□□□□□ -1.61
SPT3YDR392W PXA2P34230 853 aa5.02□□□□□ -1.61
SPT3YDR392W FTH1P38310 465 aa5.02□□□□□ -1.61
SPT3YDR392W YHR054CP38780 354 aa5.02□□□□□ -1.61
SPT3YDR392W NPP2P39997 493 aa5.02□□□□□ -1.61
SPT3YDR392W ALK1P43633 760 aaKnown RBP5.02□□□□□ -1.61
SPT3YDR392W TIM44Q01852 431 aa5.02□□□□□ -1.61
SPT3YDR392W MTD1Q02046 320 aaKnown RBP5.02□□□□□ -1.61
SPT3YDR392W STP3Q05937 343 aa5.02□□□□□ -1.61
SPT3YDR392W FAR10Q06001 478 aa5.02□□□□□ -1.61
SPT3YDR392W OMS1Q06668 471 aa5.02□□□□□ -1.61
SPT3YDR392W SHS1Q07657 551 aa5.02□□□□□ -1.61
SPT3YDR392W YLR049CQ12110 428 aa5.02□□□□□ -1.61
SPT3YDR392W YDL211CQ12121 372 aa5.02□□□□□ -1.61
SPT3YDR392W ACF2Q12168 779 aa5.02□□□□□ -1.61
SPT3YDR392W TCP1P12612 559 aaKnown RBP5.01□□□□□ -1.61
SPT3YDR392W REC107P21651 314 aa5.01□□□□□ -1.61
SPT3YDR392W YKR078WP36158 585 aaKnown RBP5.01□□□□□ -1.61
SPT3YDR392W RNT1Q02555 471 aa5.01□□□□□ -1.61
SPT3YDR392W YPR196WQ06595 470 aa5.01□□□□□ -1.61
SPT3YDR392W YOL098CQ12496 1037 aa5.01□□□□□ -1.61
SPT3YDR392W AGP1P25376 633 aa5□□□□□ -1.61
SPT3YDR392W GCD7P32502 381 aaPredicted RBP5□□□□□ -1.61
SPT3YDR392W DSS4P32601 143 aa5□□□□□ -1.61
SPT3YDR392W PHB1P40961 287 aa5□□□□□ -1.61
SPT3YDR392W QRI1P43123 477 aaKnown RBP5□□□□□ -1.61
SPT3YDR392W BPL1P48445 690 aaPredicted RBP5□□□□□ -1.61
SPT3YDR392W RAI1P53063 387 aaKnown RBP5□□□□□ -1.61
SPT3YDR392W ARK1P53974 638 aa5□□□□□ -1.61
SPT3YDR392W AIM33Q04516 312 aa5□□□□□ -1.61
SPT3YDR392W CDD1Q06549 142 aa5□□□□□ -1.61
SPT3YDR392W NOT3P06102 836 aaKnown RBP4.99□□□□□ -1.61
SPT3YDR392W ARF2P19146 181 aaKnown RBP4.99□□□□□ -1.61
SPT3YDR392W CPR3P25719 182 aa4.99□□□□□ -1.61
SPT3YDR392W STE14P32584 239 aa4.99□□□□□ -1.61
SPT3YDR392W ABD1P32783 436 aaPredicted RBP4.99□□□□□ -1.61
SPT3YDR392W MBP1P39678 833 aa4.99□□□□□ -1.61
SPT3YDR392W PDR18P53756 1333 aa4.98□□□□□ -1.61
SPT3YDR392W SRD1P09007 221 aa4.98□□□□□ -1.61
SPT3YDR392W CDC39P25655 2108 aaKnown RBP4.98□□□□□ -1.61
SPT3YDR392W SIN4P32259 974 aa4.98□□□□□ -1.61
SPT3YDR392W SMF1P38925 575 aa4.98□□□□□ -1.61
SPT3YDR392W SHE10P53075 577 aa4.98□□□□□ -1.61
SPT3YDR392W MFM1Q02783 413 aa4.98□□□□□ -1.61
SPT3YDR392W TSR1Q07381 788 aaKnown RBP4.98□□□□□ -1.61
SPT3YDR392W OPI1P21957 404 aa4.97□□□□□ -1.61
SPT3YDR392W PLC1P32383 869 aa4.97□□□□□ -1.61
SPT3YDR392W CBF2P32504 956 aa4.97□□□□□ -1.61
SPT3YDR392W KDX1P36005 433 aa4.97□□□□□ -1.61
SPT3YDR392W ECM13P38195 257 aa4.97□□□□□ -1.61
SPT3YDR392W STT3P39007 718 aaKnown RBP4.97□□□□□ -1.61
SPT3YDR392W CCT3P39077 534 aaKnown RBP4.97□□□□□ -1.61
SPT3YDR392W EXO1P39875 702 aa4.97□□□□□ -1.61
SPT3YDR392W RTS3P53289 263 aa4.97□□□□□ -1.61
SPT3YDR392W EGD1Q02642 157 aaKnown RBP4.97□□□□□ -1.61
SPT3YDR392W RSF1Q05043 376 aa4.97□□□□□ -1.61
SPT3YDR392W TFC6Q06339 672 aa4.97□□□□□ -1.61
SPT3YDR392W SSF2Q12153 453 aaPredicted RBP4.97□□□□□ -1.61
SPT3YDR392W PPR1P07272 904 aaPredicted RBP4.96□□□□□ -1.62
SPT3YDR392W ALG7P07286 448 aa4.96□□□□□ -1.62
SPT3YDR392W SSB1P11484 613 aaKnown RBP4.96□□□□□ -1.62
SPT3YDR392W OM45P16547 393 aa4.96□□□□□ -1.62
SPT3YDR392W CLN2P20438 545 aa4.96□□□□□ -1.62
SPT3YDR392W YCL049CP25577 312 aa4.96□□□□□ -1.62
SPT3YDR392W NFU1P32860 256 aa4.96□□□□□ -1.62
SPT3YDR392W APM3P38153 483 aa4.96□□□□□ -1.62
SPT3YDR392W TAE1P38340 232 aa4.96□□□□□ -1.62
SPT3YDR392W SSB2P40150 613 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms