RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene RXT3, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT3	YDL076C	TGL2	P54857	326 aa		4.63	□□□□□ -1.67
RXT3	YDL076C	SLG1	P54867	378 aa		4.63	□□□□□ -1.67
RXT3	YDL076C	MTD1	Q02046	320 aa	Known RBP	4.63	□□□□□ -1.67
RXT3	YDL076C	CEF1	Q03654	590 aa	Predicted RBP	4.63	□□□□□ -1.67
RXT3	YDL076C	PRM6	Q04705	352 aa		4.63	□□□□□ -1.67
RXT3	YDL076C	TSR1	Q07381	788 aa	Known RBP	4.63	□□□□□ -1.67
RXT3	YDL076C	RLP24	Q07915	199 aa	Known RBP	4.63	□□□□□ -1.67
RXT3	YDL076C	APC5	Q08683	685 aa		4.63	□□□□□ -1.67
RXT3	YDL076C	YPR027C	Q12079	277 aa		4.63	□□□□□ -1.67
RXT3	YDL076C	YLR149C	Q99296	730 aa		4.63	□□□□□ -1.67
RXT3	YDL076C	Q0142	Q9ZZW4	58 aa		4.63	□□□□□ -1.67
RXT3	YDL076C	CCH1	P50077	2039 aa		4.63	□□□□□ -1.67
RXT3	YDL076C	LAA1	P39526	2014 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	CYC1	P00044	109 aa	Predicted RBP	4.62	□□□□□ -1.67
RXT3	YDL076C	GAL10	P04397	699 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	CBF2	P32504	956 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	SAC6	P32599	642 aa	Known RBP	4.62	□□□□□ -1.67
RXT3	YDL076C	ECM32	P32644	1121 aa	Known RBP	4.62	□□□□□ -1.67
RXT3	YDL076C	NIC96	P34077	839 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	VPS24	P36095	224 aa	Known RBP	4.62	□□□□□ -1.67
RXT3	YDL076C	TRZ1	P36159	838 aa	Predicted RBP	4.62	□□□□□ -1.67
RXT3	YDL076C	BIT2	P38346	545 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	NUP60	P39705	539 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	EMP65	P40085	556 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	MND2	P40577	368 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	CHS6	P40955	746 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	TAN1	P53072	289 aa	Predicted RBP	4.62	□□□□□ -1.67
RXT3	YDL076C	PCL10	P53124	433 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	SPC105	P53148	917 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	PBP1	P53297	722 aa	Known RBP	4.62	□□□□□ -1.67
RXT3	YDL076C	VPS20	Q04272	221 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	CDD1	Q06549	142 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	ETT1	Q08421	412 aa	Known RBP	4.62	□□□□□ -1.67
RXT3	YDL076C	YOR352W	Q08816	343 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	LPX1	Q12405	387 aa	Known RBP	4.62	□□□□□ -1.67
RXT3	YDL076C	FAB1	P34756	2278 aa		4.62	□□□□□ -1.67
RXT3	YDL076C	RPP2A	P05319	106 aa	Known RBP	4.61	□□□□□ -1.67
RXT3	YDL076C	COX11	P19516	300 aa	Known RBP	4.61	□□□□□ -1.67
RXT3	YDL076C	LRE1	P25579	583 aa	Known RBP	4.61	□□□□□ -1.67
RXT3	YDL076C	RAD16	P31244	790 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	FRE1	P32791	686 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	XRS2	P33301	854 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	NOP4	P37838	685 aa	Known RBP	4.61	□□□□□ -1.67
RXT3	YDL076C	ATG12	P38316	186 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	CTM1	P38818	585 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	CIR1	P42940	261 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	RNR4	P49723	345 aa	Known RBP	4.61	□□□□□ -1.67
RXT3	YDL076C	NBP1	P52919	319 aa	Predicted RBP	4.61	□□□□□ -1.67
RXT3	YDL076C	SLD3	P53135	668 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	COP1	P53622	1201 aa	Known RBP	4.61	□□□□□ -1.67
RXT3	YDL076C	YNR061C	P53747	219 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	TIM8	P57744	87 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	MET14	Q02196	202 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	SNU56	Q03782	492 aa	Known RBP	4.61	□□□□□ -1.67
RXT3	YDL076C	YDL057W	Q07379	328 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	NDJ1	Q12366	352 aa		4.61	□□□□□ -1.67
RXT3	YDL076C	RPL40A	P0CH08	128 aa	Known RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	RPL40B	P0CH09	128 aa	Known RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	SPO11	P23179	398 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	STE11	P23561	717 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	RDS1	P25611	832 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	DPB3	P27344	201 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	SWE1	P32944	819 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	HSP78	P33416	811 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	YKT6	P36015	200 aa	Known RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	OAF3	P36023	863 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	FUI1	P38196	639 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	YHR078W	P38799	552 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	HXT6	P39003	570 aa	Known RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	HXT7	P39004	570 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	SSY5	P47002	699 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	MTR3	P48240	250 aa	Predicted RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	GPD1	Q00055	391 aa	Known RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	CEG1	Q01159	459 aa	Predicted RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	MUB1	Q03162	620 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	GCN5	Q03330	439 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	MZM1	Q03429	123 aa	Predicted RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	HER2	Q03557	464 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	CLU1	Q03690	1277 aa	Known RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	ATG16	Q03818	150 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	CDA2	Q06703	312 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	IWR1	Q07532	353 aa	Predicted RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	PEX15	Q08215	383 aa		4.6	□□□□□ -1.67
RXT3	YDL076C	ABP140	Q08641	628 aa	Known RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	RPS21B	Q3E754	87 aa	Known RBP	4.6	□□□□□ -1.67
RXT3	YDL076C	TPK1	P06244	397 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	RPS21A	P0C0V8	87 aa	Known RBP	4.59	□□□□□ -1.67
RXT3	YDL076C	SIR1	P21691	654 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	PPH22	P23595	377 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	SEC65	P29478	273 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	HEM12	P32347	362 aa	Predicted RBP	4.59	□□□□□ -1.67
RXT3	YDL076C	SGE1	P33335	543 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	TOR1	P35169	2470 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	RFT1	P38206	574 aa	Predicted RBP	4.59	□□□□□ -1.67
RXT3	YDL076C	CTF8	P38877	133 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	PCF11	P39081	626 aa	Predicted RBP	4.59	□□□□□ -1.67
RXT3	YDL076C	YIL161W	P40449	235 aa	Known RBP	4.59	□□□□□ -1.67
RXT3	YDL076C	SDP1	P40479	209 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	TOS3	P43637	560 aa		4.59	□□□□□ -1.67
RXT3	YDL076C	GTF1	P53260	183 aa	Predicted RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms