RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	PSK2	Q08217	1101 aa		5.09	□□□□□ -1.59
YPK3	YBR028C	BAG7	Q12128	409 aa		5.09	□□□□□ -1.59
YPK3	YBR028C	TUB1	P09733	447 aa	Known RBP	5.08	□□□□□ -1.6
YPK3	YBR028C	GSH1	P32477	678 aa		5.08	□□□□□ -1.6
YPK3	YBR028C	SIP4	P46954	829 aa		5.08	□□□□□ -1.6
YPK3	YBR028C	UBX6	P47049	396 aa		5.08	□□□□□ -1.6
YPK3	YBR028C	VPS4	P52917	437 aa		5.08	□□□□□ -1.6
YPK3	YBR028C	ADE16	P54113	591 aa	Known RBP	5.08	□□□□□ -1.6
YPK3	YBR028C	YAT1	P80235	687 aa		5.08	□□□□□ -1.6
YPK3	YBR028C	RCO1	Q04779	684 aa		5.08	□□□□□ -1.6
YPK3	YBR028C	GFD2	P25370	566 aa	Known RBP	5.08	□□□□□ -1.6
YPK3	YBR028C	PFK26	P40433	827 aa	Known RBP	5.08	□□□□□ -1.6
YPK3	YBR028C	CIR1	P42940	261 aa		5.08	□□□□□ -1.6
YPK3	YBR028C	AAT1	Q01802	451 aa		5.08	□□□□□ -1.6
YPK3	YBR028C	SPN1	Q06505	410 aa	Predicted RBP	5.08	□□□□□ -1.6
YPK3	YBR028C	OSW1	Q08692	278 aa		5.08	□□□□□ -1.6
YPK3	YBR028C	MAK32	P23060	363 aa		5.07	□□□□□ -1.6
YPK3	YBR028C	HOT13	P36078	116 aa		5.07	□□□□□ -1.6
YPK3	YBR028C	YEL068C	P39977	110 aa		5.07	□□□□□ -1.6
YPK3	YBR028C	SLK19	Q08581	821 aa	Known RBP	5.07	□□□□□ -1.6
YPK3	YBR028C	RDL1	Q12305	139 aa	Known RBP	5.07	□□□□□ -1.6
YPK3	YBR028C	RRI2	Q12348	645 aa		5.07	□□□□□ -1.6
YPK3	YBR028C	ERG27	Q12452	347 aa	Known RBP	5.07	□□□□□ -1.6
YPK3	YBR028C	SAN1	P22470	610 aa		5.06	□□□□□ -1.6
YPK3	YBR028C	ILV6	P25605	309 aa	Known RBP	5.06	□□□□□ -1.6
YPK3	YBR028C	PAH1	P32567	862 aa		5.06	□□□□□ -1.6
YPK3	YBR028C	SRB5	P32585	307 aa		5.06	□□□□□ -1.6
YPK3	YBR028C	YJR061W	P40355	935 aa		5.06	□□□□□ -1.6
YPK3	YBR028C	YRB30	P53107	440 aa	Predicted RBP	5.06	□□□□□ -1.6
YPK3	YBR028C	YKU80	Q04437	629 aa		5.06	□□□□□ -1.6
YPK3	YBR028C	SWA2	Q06677	668 aa		5.06	□□□□□ -1.6
YPK3	YBR028C	YOR019W	Q99248	730 aa		5.06	□□□□□ -1.6
YPK3	YBR028C	CDC16	P09798	840 aa		5.05	□□□□□ -1.6
YPK3	YBR028C	SRP54	P20424	541 aa	Known RBP	5.05	□□□□□ -1.6
YPK3	YBR028C	PTC6	P25646	442 aa		5.05	□□□□□ -1.6
YPK3	YBR028C	IMD2	P38697	523 aa	Known RBP	5.05	□□□□□ -1.6
YPK3	YBR028C	ERV46	P39727	415 aa		5.05	□□□□□ -1.6
YPK3	YBR028C	PHM8	P40025	321 aa		5.05	□□□□□ -1.6
YPK3	YBR028C	SWP82	P43554	623 aa		5.05	□□□□□ -1.6
YPK3	YBR028C	UPF3	P48412	387 aa	Known RBP	5.05	□□□□□ -1.6
YPK3	YBR028C	IMD3	P50095	523 aa	Known RBP	5.05	□□□□□ -1.6
YPK3	YBR028C	CRN1	Q06440	651 aa		5.05	□□□□□ -1.6
YPK3	YBR028C	LEA1	Q08963	238 aa	Predicted RBP	5.05	□□□□□ -1.6
YPK3	YBR028C	LYS21	Q12122	440 aa	Known RBP	5.05	□□□□□ -1.6
YPK3	YBR028C	YLR111W	Q12528	110 aa		5.05	□□□□□ -1.6
YPK3	YBR028C	ILV2	P07342	687 aa	Known RBP	5.04	□□□□□ -1.6
YPK3	YBR028C	TFC3	P34111	1160 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	ALY1	P36117	915 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	FTH1	P38310	465 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	LYS14	P40971	790 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	YPR003C	P53394	754 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	BSC5	P53755	489 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	BSP1	Q06604	576 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	VIP1	Q06685	1146 aa	Known RBP	5.04	□□□□□ -1.6
YPK3	YBR028C	ENT4	Q07872	247 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	GPN2	Q08726	347 aa	Predicted RBP	5.04	□□□□□ -1.6
YPK3	YBR028C	CET1	O13297	549 aa	Predicted RBP	5.04	□□□□□ -1.6
YPK3	YBR028C	AAC3	P18238	307 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	NOP16	P40007	231 aa	Known RBP	5.04	□□□□□ -1.6
YPK3	YBR028C	TMA108	P40462	946 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	PIL1	P53252	339 aa	Known RBP	5.04	□□□□□ -1.6
YPK3	YBR028C	INN1	P53901	409 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	NUS1	Q12063	375 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	NBP2	Q12163	236 aa		5.04	□□□□□ -1.6
YPK3	YBR028C	RPL19A	P0CX82	189 aa	Known RBP	5.03	□□□□□ -1.6
YPK3	YBR028C	RPL19B	P0CX83	189 aa	Predicted RBP	5.03	□□□□□ -1.6
YPK3	YBR028C	NTR2	P36118	322 aa	Predicted RBP	5.03	□□□□□ -1.6
YPK3	YBR028C	YSA1	Q01976	231 aa		5.03	□□□□□ -1.6
YPK3	YBR028C	COG4	Q06096	861 aa		5.03	□□□□□ -1.6
YPK3	YBR028C	BI2	P03873	423 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	MBR1	P23493	339 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	IMP2'	P32351	346 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	PEX2	P32800	271 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	ESL2	P36168	1195 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	APD1	P38281	316 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	SLZ1	P40167	298 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	CDC1	P40986	491 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	CIN1	P40987	1014 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	IME4	P41833	600 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	ARC1	P46672	376 aa	Known RBP	5.02	□□□□□ -1.61
YPK3	YBR028C	AAD10	P47182	288 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	DCP2	P53550	970 aa	Known RBP	5.02	□□□□□ -1.61
YPK3	YBR028C	MUB1	Q03162	620 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	YOR389W	Q08912	624 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	FRE7	Q12333	620 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	SKM1	Q12469	655 aa		5.02	□□□□□ -1.61
YPK3	YBR028C	AAP1	P37898	856 aa	Known RBP	5.01	□□□□□ -1.61
YPK3	YBR028C	UBP13	P38187	747 aa		5.01	□□□□□ -1.61
YPK3	YBR028C	SEC24	P40482	926 aa	Known RBP	5.01	□□□□□ -1.61
YPK3	YBR028C	FCP1	Q03254	732 aa		5.01	□□□□□ -1.61
YPK3	YBR028C	RAD30	Q04049	632 aa		5.01	□□□□□ -1.61
YPK3	YBR028C	ENT1	Q12518	454 aa		5.01	□□□□□ -1.61
YPK3	YBR028C	SEM1	O94742	89 aa		5	□□□□□ -1.61
YPK3	YBR028C	CDC24	P11433	854 aa	Predicted RBP	5	□□□□□ -1.61
YPK3	YBR028C	HOM2	P13663	365 aa	Known RBP	5	□□□□□ -1.61
YPK3	YBR028C	ADE17	P38009	592 aa	Known RBP	5	□□□□□ -1.61
YPK3	YBR028C	KTR3	P38130	404 aa	Predicted RBP	5	□□□□□ -1.61
YPK3	YBR028C	ERP2	P39704	215 aa		5	□□□□□ -1.61
YPK3	YBR028C	YGL036W	P53185	909 aa	Predicted RBP	5	□□□□□ -1.61
YPK3	YBR028C	ATP23	P53722	227 aa		5	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms