RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 CABP5Q9NP86 173 aa24.51■■□□□ 1.51
LIME1-210ENST00000621325 HPSEQ9Y251 543 aa24.51■■□□□ 1.51
LIME1-210ENST00000621325 LTBP1Q14766 1721 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 USP17L3A6NCW0 530 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 USP17L4A6NCW7 530 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 GTF2IP78347 998 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 GRIN1Q05586 938 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 EARS2Q5JPH6 523 aaKnown RBP24.5■■□□□ 1.51
LIME1-210ENST00000621325 USP17L1Q7RTZ2 530 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 PIBF1Q8WXW3 757 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 PHF20Q9BVI0 1012 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 MKNK2Q9HBH9 465 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 KIAA1468Q9P260 1216 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 SPECC1Q5M775 1068 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 MSL1Q68DK7 614 aa24.5■■□□□ 1.51
LIME1-210ENST00000621325 ROBO3Q96MS0 1386 aa24.49■■□□□ 1.51
LIME1-210ENST00000621325 CAVIN2O95810 425 aa24.49■■□□□ 1.51
LIME1-210ENST00000621325 MMP10P09238 476 aa24.49■■□□□ 1.51
LIME1-210ENST00000621325 VEGFAP15692 232 aaPredicted RBP24.49■■□□□ 1.51
LIME1-210ENST00000621325 SYKP43405 635 aa24.49■■□□□ 1.51
LIME1-210ENST00000621325 RILPL1Q5EBL4 403 aa24.49■■□□□ 1.51
LIME1-210ENST00000621325 RESP18Q5W5W9 173 aa24.49■■□□□ 1.51
LIME1-210ENST00000621325 TEX11Q8IYF3 940 aa24.49■■□□□ 1.51
LIME1-210ENST00000621325 ANO10Q9NW15 660 aa24.49■■□□□ 1.51
LIME1-210ENST00000621325 LRRC37AA6NMS7 1700 aa24.49■■□□□ 1.51
LIME1-210ENST00000621325 ZNF500O60304 480 aaPredicted RBP24.49■■□□□ 1.51
LIME1-210ENST00000621325 CUTAO60888 179 aa24.48■■□□□ 1.51
LIME1-210ENST00000621325 RHBDL3P58872 404 aa24.48■■□□□ 1.51
LIME1-210ENST00000621325 ZNF772Q68DY9 489 aaPredicted RBP24.48■■□□□ 1.51
LIME1-210ENST00000621325 NOM1Q5C9Z4 860 aaKnown RBP24.47■■□□□ 1.51
LIME1-210ENST00000621325 AMOTL1Q8IY63 956 aa24.47■■□□□ 1.51
LIME1-210ENST00000621325 NAV1Q8NEY1 1877 aa24.47■■□□□ 1.51
LIME1-210ENST00000621325 BIN1O00499 593 aa24.47■■□□□ 1.51
LIME1-210ENST00000621325 XBP1P17861 261 aa24.47■■□□□ 1.51
LIME1-210ENST00000621325 TMC4Q7Z404 712 aa24.47■■□□□ 1.51
LIME1-210ENST00000621325 DHX40Q8IX18 779 aaKnown RBP24.47■■□□□ 1.51
LIME1-210ENST00000621325 KRI1Q8N9T8 703 aaKnown RBP24.47■■□□□ 1.51
LIME1-210ENST00000621325 KAT14Q9H8E8 782 aa24.47■■□□□ 1.51
LIME1-210ENST00000621325 PRDM10Q9NQV6 1147 aa24.47■■□□□ 1.51
LIME1-210ENST00000621325 NPY5RQ15761 445 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 DPCR1Q3MIW9 517 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 SMAP1Q8IYB5 467 aaPredicted RBP24.46■■□□□ 1.51
LIME1-210ENST00000621325 TRIM5Q9C035 493 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 FBXO2Q9UK22 296 aaPredicted RBP24.46■■□□□ 1.51
LIME1-210ENST00000621325 FLT1P17948 1338 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 FAM205AQ6ZU69 1335 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 FAM237AA0A1B0GTK4 181 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 TSPY3P0CV98 308 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 TSPY8P0CW00 308 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 NPR1P16066 1061 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 RASA1P20936 1047 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 KRT2P35908 639 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 DGKHQ86XP1 1220 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 PNMA1Q8ND90 353 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 TBC1D22AQ8WUA7 517 aa24.46■■□□□ 1.51
LIME1-210ENST00000621325 F8W031 263 aaPredicted RBP24.45■■□□□ 1.51
LIME1-210ENST00000621325 ZNF444Q8N0Y2 327 aaPredicted RBP24.45■■□□□ 1.51
LIME1-210ENST00000621325 STAG2Q8N3U4 1231 aa24.45■■□□□ 1.51
LIME1-210ENST00000621325 FAM163AQ96GL9 167 aaPredicted RBP24.45■■□□□ 1.51
LIME1-210ENST00000621325 ARID3AQ99856 593 aa24.45■■□□□ 1.51
LIME1-210ENST00000621325 MXD3Q9BW11 206 aa24.45■■□□□ 1.51
LIME1-210ENST00000621325 GAKO14976 1311 aa24.45■■□□□ 1.5
LIME1-210ENST00000621325 CDK5RAP2Q96SN8 1893 aa24.45■■□□□ 1.5
LIME1-210ENST00000621325 ZNF75DP51815 510 aa24.45■■□□□ 1.5
LIME1-210ENST00000621325 FAM13BQ9NYF5 915 aa24.45■■□□□ 1.5
LIME1-210ENST00000621325 WNT7AO00755 349 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 DOK7Q18PE1 504 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 PLA2G4DQ86XP0 818 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 CEP57L1Q8IYX8 460 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 CERS5Q8N5B7 392 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 MTMR7Q9Y216 660 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 DAGLAQ9Y4D2 1042 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 GOLGA6L19H0YKK7 550 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 ADAMTS3O15072 1205 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 PTPREP23469 700 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 ANKS1AQ92625 1134 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 TIGD1Q96MW7 591 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 COA1Q9GZY4 146 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 KCNH3Q9ULD8 1083 aa24.44■■□□□ 1.5
LIME1-210ENST00000621325 LONRF3Q496Y0 759 aa24.43■■□□□ 1.5
LIME1-210ENST00000621325 ISM2Q6H9L7 571 aa24.43■■□□□ 1.5
LIME1-210ENST00000621325 AOPEPQ8N6M6 819 aa24.43■■□□□ 1.5
LIME1-210ENST00000621325 PARP3Q9Y6F1 533 aa24.43■■□□□ 1.5
LIME1-210ENST00000621325 NRXN2Q9P2S2 1712 aa24.43■■□□□ 1.5
LIME1-210ENST00000621325 SCG2P13521 617 aa24.43■■□□□ 1.5
LIME1-210ENST00000621325 CDK8P49336 464 aa24.43■■□□□ 1.5
LIME1-210ENST00000621325 TNFRSF25Q93038 417 aa24.43■■□□□ 1.5
LIME1-210ENST00000621325 ZC3H12CQ9C0D7 883 aaKnown RBP24.43■■□□□ 1.5
LIME1-210ENST00000621325 BECN2A8MW95 431 aa24.42■■□□□ 1.5
LIME1-210ENST00000621325 HMGB2P26583 209 aaKnown RBP24.42■■□□□ 1.5
LIME1-210ENST00000621325 STX8Q9UNK0 236 aa24.42■■□□□ 1.5
LIME1-210ENST00000621325 PLCG2P16885 1265 aa24.42■■□□□ 1.5
LIME1-210ENST00000621325 KIF5BP33176 963 aa24.42■■□□□ 1.5
LIME1-210ENST00000621325 PNOCQ13519 176 aa24.42■■□□□ 1.5
LIME1-210ENST00000621325 DPP8Q6V1X1 898 aaPredicted RBP24.42■■□□□ 1.5
LIME1-210ENST00000621325 RASGRP2Q7LDG7 609 aa24.42■■□□□ 1.5
LIME1-210ENST00000621325 CERS3Q8IU89 383 aa24.42■■□□□ 1.5
LIME1-210ENST00000621325 KCNF1Q9H3M0 494 aa24.42■■□□□ 1.5
LIME1-210ENST00000621325 PDE6BP35913 854 aa24.41■■□□□ 1.5
LIME1-210ENST00000621325 PFKFB3Q16875 520 aaPredicted RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms