RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 LIMA1Q9UHB6 759 aaKnown RBP25.36■■□□□ 1.65
SHANK2-220ENST00000608988 DOCK2Q92608 1830 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 ERICH2A1L162 156 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 WDR93Q6P2C0 686 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 MFSD6Q6ZSS7 791 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 PNKPQ96T60 521 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 VIPAS39Q9H9C1 493 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 MKRN1Q9UHC7 482 aaKnown RBP25.36■■□□□ 1.65
SHANK2-220ENST00000608988 KCNJ14Q9UNX9 436 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 LRRC10BA6NIK2 292 aa25.35■■□□□ 1.65
SHANK2-220ENST00000608988 CYP26C1Q6V0L0 522 aa25.35■■□□□ 1.65
SHANK2-220ENST00000608988 GRAMD1CQ8IYS0 662 aa25.35■■□□□ 1.65
SHANK2-220ENST00000608988 TTLL11Q8NHH1 800 aa25.35■■□□□ 1.65
SHANK2-220ENST00000608988 RNF26Q9BY78 433 aaPredicted RBP25.35■■□□□ 1.65
SHANK2-220ENST00000608988 IRX2Q9BZI1 471 aaPredicted RBP25.35■■□□□ 1.65
SHANK2-220ENST00000608988 PUF60Q9UHX1 559 aaKnown RBP25.35■■□□□ 1.65
SHANK2-220ENST00000608988 COL22A1Q8NFW1 1626 aaPredicted RBP25.35■■□□□ 1.65
SHANK2-220ENST00000608988 GUCY1A2P33402 732 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 DPYDQ12882 1025 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 HSP90B2PQ58FF3 399 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 SRLQ86TD4 932 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 PAGE5Q96GU1 130 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 NACAP1Q9BZK3 213 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 RNF41Q9H4P4 317 aaPredicted RBP25.34■■□□□ 1.65
SHANK2-220ENST00000608988 VPS18Q9P253 973 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 MYO1CO00159 1063 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 PDE8BO95263 885 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 PROSER2Q86WR7 435 aaPredicted RBP25.34■■□□□ 1.65
SHANK2-220ENST00000608988 SLC35F6Q8N357 371 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 EPB41L4AQ9HCS5 686 aaPredicted RBP25.34■■□□□ 1.65
SHANK2-220ENST00000608988 ABCB6Q9NP58 842 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 CNNM1Q9NRU3 951 aa25.34■■□□□ 1.65
SHANK2-220ENST00000608988 LRP5O75197 1615 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 PPP1R3GB7ZBB8 358 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 GYPCP04921 128 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 ITGA6P23229 1130 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 CASP14P31944 242 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 MAP3K12Q12852 859 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 MCM6Q14566 821 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 NOM1Q5C9Z4 860 aaKnown RBP25.33■■□□□ 1.65
SHANK2-220ENST00000608988 ANKRD20A12PQ8NF67 263 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 EFCC1Q9HA90 598 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 PNPLA7Q6ZV29 1317 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 RTL9Q8NET4 1388 aa25.33■■□□□ 1.65
SHANK2-220ENST00000608988 CTCFLQ8NI51 663 aaPredicted RBP25.32■■□□□ 1.64
SHANK2-220ENST00000608988 FAM89AQ96GI7 184 aa25.32■■□□□ 1.64
SHANK2-220ENST00000608988 SEC31BQ9NQW1 1179 aa25.32■■□□□ 1.64
SHANK2-220ENST00000608988 DCCP43146 1447 aa25.32■■□□□ 1.64
SHANK2-220ENST00000608988 CTSWP56202 376 aa25.32■■□□□ 1.64
SHANK2-220ENST00000608988 CASP8Q14790 479 aa25.32■■□□□ 1.64
SHANK2-220ENST00000608988 CTR9Q6PD62 1173 aa25.32■■□□□ 1.64
SHANK2-220ENST00000608988 FANCBQ8NB91 859 aa25.32■■□□□ 1.64
SHANK2-220ENST00000608988 ZSWIM4Q9H7M6 989 aa25.32■■□□□ 1.64
SHANK2-220ENST00000608988 CD44P16070 742 aaKnown RBP25.31■■□□□ 1.64
SHANK2-220ENST00000608988 LPIN2Q92539 896 aa25.31■■□□□ 1.64
SHANK2-220ENST00000608988 ABHD10Q9NUJ1 306 aa25.31■■□□□ 1.64
SHANK2-220ENST00000608988 RRP15Q9Y3B9 282 aaKnown RBP25.31■■□□□ 1.64
SHANK2-220ENST00000608988 MYH3P11055 1940 aa25.31■■□□□ 1.64
SHANK2-220ENST00000608988 UBE2Q2LH0YL09 131 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 AMPD2Q01433 879 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 NR5A1Q13285 461 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 PUM3Q15397 648 aaKnown RBP25.3■■□□□ 1.64
SHANK2-220ENST00000608988 CABP5Q9NP86 173 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 RWDD2AQ9UIY3 292 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 MBD4O95243 580 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 KRT2P35908 639 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 ARHGAP25P42331 645 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 CTDSPL2Q05D32 466 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 MAP9Q49MG5 647 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 GIGYF2Q6Y7W6 1299 aaKnown RBP25.3■■□□□ 1.64
SHANK2-220ENST00000608988 CPLX3Q8WVH0 158 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 RPGRIP1Q96KN7 1286 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 TRIM34Q9BYJ4 488 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 MYO6Q9UM54 1294 aa25.3■■□□□ 1.64
SHANK2-220ENST00000608988 MROH5Q6ZUA9 1318 aa25.29■■□□□ 1.64
SHANK2-220ENST00000608988 GSG1L2A8MUP6 293 aa25.29■■□□□ 1.64
SHANK2-220ENST00000608988 PHKA1P46020 1223 aa25.29■■□□□ 1.64
SHANK2-220ENST00000608988 AARSP49588 968 aaKnown RBP eCLIP25.29■■□□□ 1.64
SHANK2-220ENST00000608988 FXR1P51114 621 aaKnown RBP eCLIP25.29■■□□□ 1.64
SHANK2-220ENST00000608988 VSNL1P62760 191 aa25.29■■□□□ 1.64
SHANK2-220ENST00000608988 AKAP17AQ02040 695 aaKnown RBP25.29■■□□□ 1.64
SHANK2-220ENST00000608988 USP49Q70CQ1 688 aa25.29■■□□□ 1.64
SHANK2-220ENST00000608988 ZNF654Q8IZM8 581 aa25.29■■□□□ 1.64
SHANK2-220ENST00000608988 GOLGA6L1Q8N7Z2 621 aa25.29■■□□□ 1.64
SHANK2-220ENST00000608988 TRERF1Q96PN7 1200 aa25.29■■□□□ 1.64
SHANK2-220ENST00000608988 BCORQ6W2J9 1755 aa25.29■■□□□ 1.64
SHANK2-220ENST00000608988 DISP2A7MBM2 1401 aa25.29■■□□□ 1.64
SHANK2-220ENST00000608988 GYS2P54840 703 aa25.28■■□□□ 1.64
SHANK2-220ENST00000608988 CHRNA2Q15822 529 aa25.28■■□□□ 1.64
SHANK2-220ENST00000608988 KLHL10Q6JEL2 608 aa25.28■■□□□ 1.64
SHANK2-220ENST00000608988 ZNF662Q6ZS27 426 aa25.28■■□□□ 1.64
SHANK2-220ENST00000608988 CCDC148Q8NFR7 591 aa25.28■■□□□ 1.64
SHANK2-220ENST00000608988 GREM2Q9H772 168 aa25.28■■□□□ 1.64
SHANK2-220ENST00000608988 FGFR2P21802 821 aa25.28■■□□□ 1.64
SHANK2-220ENST00000608988 SPATA5Q8NB90 893 aa25.28■■□□□ 1.64
SHANK2-220ENST00000608988 CCDC85AQ96PX6 553 aaPredicted RBP25.28■■□□□ 1.64
SHANK2-220ENST00000608988 PHF20Q9BVI0 1012 aa25.28■■□□□ 1.64
SHANK2-220ENST00000608988 TAOK2Q9UL54 1235 aa25.28■■□□□ 1.64
SHANK2-220ENST00000608988 ANKRD36CQ5JPF3 1778 aa25.27■■□□□ 1.64
SHANK2-220ENST00000608988 KRT31Q15323 416 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms