RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-208ENST00000598059 GTF3C2Q8WUA4 911 aaPredicted RBP25.81■■□□□ 1.72
SYMPK-208ENST00000598059 HTATIP2Q9BUP3 242 aa25.81■■□□□ 1.72
SYMPK-208ENST00000598059 BOLA2Q9H3K6 86 aa25.81■■□□□ 1.72
SYMPK-208ENST00000598059 PAG1Q9NWQ8 432 aa25.81■■□□□ 1.72
SYMPK-208ENST00000598059 MCM9Q9NXL9 1143 aa25.81■■□□□ 1.72
SYMPK-208ENST00000598059 PCDH10Q9P2E7 1040 aa25.81■■□□□ 1.72
SYMPK-208ENST00000598059 COLQQ9Y215 455 aaPredicted RBP25.81■■□□□ 1.72
SYMPK-208ENST00000598059 TFRCP02786 760 aaKnown RBP25.8■■□□□ 1.72
SYMPK-208ENST00000598059 ATP5JP18859 108 aa25.8■■□□□ 1.72
SYMPK-208ENST00000598059 ERVK-9P63128 1117 aa25.8■■□□□ 1.72
SYMPK-208ENST00000598059 ERVK-24P63145 666 aa25.8■■□□□ 1.72
SYMPK-208ENST00000598059 Q3C1V9 767 aa25.8■■□□□ 1.72
SYMPK-208ENST00000598059 LCORLQ8N3X6 602 aa25.8■■□□□ 1.72
SYMPK-208ENST00000598059 SDR42E1Q8WUS8 393 aa25.8■■□□□ 1.72
SYMPK-208ENST00000598059 KIAA1683Q9H0B3 1180 aa25.8■■□□□ 1.72
SYMPK-208ENST00000598059 CRISPLD2Q9H0B8 497 aa25.8■■□□□ 1.72
SYMPK-208ENST00000598059 CABP5Q9NP86 173 aa25.8■■□□□ 1.72
SYMPK-208ENST00000598059 USP14P54578 494 aa25.79■■□□□ 1.72
SYMPK-208ENST00000598059 EVX2Q03828 476 aa25.79■■□□□ 1.72
SYMPK-208ENST00000598059 ACER1Q8TDN7 264 aa25.79■■□□□ 1.72
SYMPK-208ENST00000598059 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.79■■□□□ 1.721e-6■□□□□ 8.2
SYMPK-208ENST00000598059 DCP1AQ9NPI6 582 aaPredicted RBP25.79■■□□□ 1.72
SYMPK-208ENST00000598059 USP17L15C9J2P7 530 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 USP17L13C9JLJ4 530 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 USP17L11C9JVI0 530 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 USP17L18D6R9N7 530 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 USP17L22D6RA61 530 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 USP17L17D6RBQ6 530 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 USP17L19D6RCP7 530 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 USP17L20D6RJB6 530 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 MAPK4P31152 587 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 GUCY1A2P33402 732 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 USP17L24Q0WX57 530 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 SOCS4Q8WXH5 440 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 HAUS7Q99871 368 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 NUDT12Q9BQG2 462 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 PAGR1Q9BTK6 254 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 PORCNQ9H237 461 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 LAMA3Q16787 3333 aa25.78■■□□□ 1.72
SYMPK-208ENST00000598059 MYH7P12883 1935 aa25.77■■□□□ 1.72
SYMPK-208ENST00000598059 VCAM1P19320 739 aa25.77■■□□□ 1.72
SYMPK-208ENST00000598059 CYP2B6P20813 491 aa25.77■■□□□ 1.72
SYMPK-208ENST00000598059 ADD2P35612 726 aa25.77■■□□□ 1.72
SYMPK-208ENST00000598059 TRIM32Q13049 653 aa25.77■■□□□ 1.72
SYMPK-208ENST00000598059 SLFNL1Q499Z3 407 aa25.77■■□□□ 1.72
SYMPK-208ENST00000598059 TRIB2Q92519 343 aa25.77■■□□□ 1.72
SYMPK-208ENST00000598059 ARMT1Q9H993 441 aa25.77■■□□□ 1.72
SYMPK-208ENST00000598059 BAZ2AQ9UIF9 1905 aaKnown RBP25.76■■□□□ 1.72
SYMPK-208ENST00000598059 XRCC5P13010 732 aaKnown RBP25.76■■□□□ 1.71
SYMPK-208ENST00000598059 CATSPERGQ6ZRH7 1159 aa25.76■■□□□ 1.71
SYMPK-208ENST00000598059 CCAR1Q8IX12 1150 aaKnown RBP25.76■■□□□ 1.71
SYMPK-208ENST00000598059 LRRCC1Q9C099 1032 aa25.76■■□□□ 1.71
SYMPK-208ENST00000598059 RABGAP1Q9Y3P9 1069 aa25.76■■□□□ 1.71
SYMPK-208ENST00000598059 RPTORQ8N122 1335 aa25.76■■□□□ 1.71
SYMPK-208ENST00000598059 DNAH12Q6ZR08 3092 aa25.76■■□□□ 1.71
SYMPK-208ENST00000598059 MYH8P13535 1937 aa25.75■■□□□ 1.71
SYMPK-208ENST00000598059 SEPT2Q15019 361 aa25.75■■□□□ 1.71
SYMPK-208ENST00000598059 ERICH6BQ5W0A0 696 aa25.75■■□□□ 1.71
SYMPK-208ENST00000598059 GPR142Q7Z601 462 aa25.75■■□□□ 1.71
SYMPK-208ENST00000598059 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.75■■□□□ 1.711e-6■■■□□ 14.6
SYMPK-208ENST00000598059 HMX1Q9NP08 348 aaPredicted RBP25.75■■□□□ 1.71
SYMPK-208ENST00000598059 MBD4O95243 580 aa25.74■■□□□ 1.71
SYMPK-208ENST00000598059 CYP2D6P10635 497 aa25.74■■□□□ 1.71
SYMPK-208ENST00000598059 USP6NLQ92738 828 aa25.74■■□□□ 1.71
SYMPK-208ENST00000598059 MPHOSPH10O00566 681 aaKnown RBP25.73■■□□□ 1.71
SYMPK-208ENST00000598059 PRKAB2O43741 272 aa25.73■■□□□ 1.71
SYMPK-208ENST00000598059 CNMDO75829 334 aa25.73■■□□□ 1.71
SYMPK-208ENST00000598059 FXR1P51114 621 aaKnown RBP eCLIP25.73■■□□□ 1.71
SYMPK-208ENST00000598059 MORN1Q5T089 497 aa25.73■■□□□ 1.71
SYMPK-208ENST00000598059 MAP3K21Q5TCX8 1036 aa25.73■■□□□ 1.71
SYMPK-208ENST00000598059 PLEKHH3Q7Z736 793 aa25.73■■□□□ 1.71
SYMPK-208ENST00000598059 SLC44A5Q8NCS7 719 aa25.73■■□□□ 1.71
SYMPK-208ENST00000598059 ATP8A2Q9NTI2 1148 aa25.73■■□□□ 1.71
SYMPK-208ENST00000598059 SMARCA5O60264 1052 aaPredicted RBP25.72■■□□□ 1.71
SYMPK-208ENST00000598059 CHGBP05060 677 aa25.72■■□□□ 1.71
SYMPK-208ENST00000598059 CHRDL2Q6WN34 429 aa25.72■■□□□ 1.71
SYMPK-208ENST00000598059 LBX2Q6XYB7 198 aa25.72■■□□□ 1.71
SYMPK-208ENST00000598059 PAWRQ96IZ0 340 aaKnown RBP25.72■■□□□ 1.71
SYMPK-208ENST00000598059 RPAP3Q9H6T3 665 aaPredicted RBP25.72■■□□□ 1.71
SYMPK-208ENST00000598059 SWAP70Q9UH65 585 aa25.72■■□□□ 1.71
SYMPK-208ENST00000598059 NR2E3Q9Y5X4 410 aa25.72■■□□□ 1.71
SYMPK-208ENST00000598059 A0A1W2PRG0 241 aa25.71■■□□□ 1.71
SYMPK-208ENST00000598059 CCNA1P78396 465 aa25.71■■□□□ 1.71
SYMPK-208ENST00000598059 UBE3CQ15386 1083 aa25.71■■□□□ 1.71
SYMPK-208ENST00000598059 TRMT44Q8IYL2 757 aaKnown RBP25.71■■□□□ 1.71
SYMPK-208ENST00000598059 ANKLE1Q8NAG6 615 aa25.71■■□□□ 1.71
SYMPK-208ENST00000598059 DYNLL2Q96FJ2 89 aa25.71■■□□□ 1.71
SYMPK-208ENST00000598059 PRKAR2AP13861 404 aaKnown RBP25.7■■□□□ 1.7
SYMPK-208ENST00000598059 RGS2P41220 211 aa25.7■■□□□ 1.7
SYMPK-208ENST00000598059 TMEM179Q6ZVK1 233 aa25.7■■□□□ 1.7
SYMPK-208ENST00000598059 NECAB2Q7Z6G3 386 aa25.7■■□□□ 1.7
SYMPK-208ENST00000598059 DIS3LQ8TF46 1054 aaKnown RBP25.7■■□□□ 1.7
SYMPK-208ENST00000598059 ALPK3Q96L96 1907 aa25.7■■□□□ 1.7
SYMPK-208ENST00000598059 SPDYE16A6NNV3 312 aaPredicted RBP25.69■■□□□ 1.7
SYMPK-208ENST00000598059 EVI5O60447 810 aa25.69■■□□□ 1.7
SYMPK-208ENST00000598059 ZKSCAN1P17029 563 aaPredicted RBP25.69■■□□□ 1.7
SYMPK-208ENST00000598059 HDAC1Q13547 482 aaPredicted RBP25.69■■□□□ 1.7
SYMPK-208ENST00000598059 CWC22Q9HCG8 908 aaKnown RBP25.69■■□□□ 1.7
SYMPK-208ENST00000598059 BTBD7Q9P203 1132 aa25.69■■□□□ 1.7
SYMPK-208ENST00000598059 CCL14Q16627 93 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms