RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 USP17L15C9J2P7 530 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 USP17L13C9JLJ4 530 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 USP17L11C9JVI0 530 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 USP17L18D6R9N7 530 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 USP17L22D6RA61 530 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 USP17L17D6RBQ6 530 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 USP17L19D6RCP7 530 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 USP17L20D6RJB6 530 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 PLXNB2O15031 1838 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 SGPL1O95470 568 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 ERVK-9P63128 1117 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 ERVK-24P63145 666 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 USP17L24Q0WX57 530 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 ACER1Q8TDN7 264 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 ECHDC1Q9NTX5 307 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 SWAP70Q9UH65 585 aa27.54■■■□□ 2
CDKN2A-212ENST00000578845 MYH7P12883 1935 aa27.53■■■□□ 2
CDKN2A-212ENST00000578845 HMGCRP04035 888 aa27.53■■■□□ 2
CDKN2A-212ENST00000578845 VCAM1P19320 739 aa27.53■■■□□ 2
CDKN2A-212ENST00000578845 ZSCAN25Q6NSZ9 544 aa27.53■■■□□ 2
CDKN2A-212ENST00000578845 PRKAB2O43741 272 aa27.52■■■□□ 2
CDKN2A-212ENST00000578845 PEX10O60683 326 aa27.52■■■□□ 2
CDKN2A-212ENST00000578845 CHGBP05060 677 aa27.52■■■□□ 2
CDKN2A-212ENST00000578845 CYP2D6P10635 497 aa27.52■■■□□ 2
CDKN2A-212ENST00000578845 MAPK4P31152 587 aa27.52■■■□□ 2
CDKN2A-212ENST00000578845 SEPT2Q15019 361 aa27.52■■■□□ 2
CDKN2A-212ENST00000578845 ZYXQ15942 572 aaKnown RBP27.52■■■□□ 2
CDKN2A-212ENST00000578845 LBX2Q6XYB7 198 aa27.52■■■□□ 2
CDKN2A-212ENST00000578845 CATSPERGQ6ZRH7 1159 aa27.52■■■□□ 2
CDKN2A-212ENST00000578845 SOCS4Q8WXH5 440 aa27.52■■■□□ 2
CDKN2A-212ENST00000578845 CEP290O15078 2479 aa27.52■■■□□ 2
CDKN2A-212ENST00000578845 Q3C1V9 767 aa27.51■■□□□ 1.99
CDKN2A-212ENST00000578845 RABGAP1Q9Y3P9 1069 aa27.51■■□□□ 1.99
CDKN2A-212ENST00000578845 XRCC5P13010 732 aaKnown RBP27.5■■□□□ 1.99
CDKN2A-212ENST00000578845 TMEM179Q6ZVK1 233 aa27.5■■□□□ 1.99
CDKN2A-212ENST00000578845 CRISPLD2Q9H0B8 497 aa27.5■■□□□ 1.99
CDKN2A-212ENST00000578845 CNMDO75829 334 aa27.49■■□□□ 1.99
CDKN2A-212ENST00000578845 C12orf60Q5U649 245 aa27.49■■□□□ 1.99
CDKN2A-212ENST00000578845 SLC44A5Q8NCS7 719 aa27.49■■□□□ 1.99
CDKN2A-212ENST00000578845 USP6NLQ92738 828 aa27.49■■□□□ 1.99
CDKN2A-212ENST00000578845 DEFB118Q96PH6 123 aa27.49■■□□□ 1.99
CDKN2A-212ENST00000578845 NUDT12Q9BQG2 462 aa27.49■■□□□ 1.99
CDKN2A-212ENST00000578845 PAGR1Q9BTK6 254 aa27.49■■□□□ 1.99
CDKN2A-212ENST00000578845 PORCNQ9H237 461 aa27.49■■□□□ 1.99
CDKN2A-212ENST00000578845 A0A1W2PRG0 241 aa27.48■■□□□ 1.99
CDKN2A-212ENST00000578845 FARP2O94887 1054 aaPredicted RBP27.48■■□□□ 1.99
CDKN2A-212ENST00000578845 DYNLL2Q96FJ2 89 aa27.48■■□□□ 1.99
CDKN2A-212ENST00000578845 GPATCH3Q96I76 525 aa27.48■■□□□ 1.99
CDKN2A-212ENST00000578845 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.48■■□□□ 1.99
CDKN2A-212ENST00000578845 PUS7LQ9H0K6 701 aaKnown RBP27.48■■□□□ 1.99
CDKN2A-212ENST00000578845 MPHOSPH10O00566 681 aaKnown RBP27.47■■□□□ 1.99
CDKN2A-212ENST00000578845 MORN1Q5T089 497 aa27.47■■□□□ 1.99
CDKN2A-212ENST00000578845 GPR142Q7Z601 462 aa27.47■■□□□ 1.99
CDKN2A-212ENST00000578845 KBTBD3Q8NAB2 608 aa27.47■■□□□ 1.99
CDKN2A-212ENST00000578845 TRIB2Q92519 343 aa27.47■■□□□ 1.99
CDKN2A-212ENST00000578845 RPAP3Q9H6T3 665 aaPredicted RBP27.47■■□□□ 1.99
CDKN2A-212ENST00000578845 BAZ2AQ9UIF9 1905 aaKnown RBP27.47■■□□□ 1.99
CDKN2A-212ENST00000578845 RPTORQ8N122 1335 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 USP17L12C9JPN9 530 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 USP17L21D6R901 530 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 MAP3K21Q5TCX8 1036 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 C16orf86Q6ZW13 317 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 PLEKHH3Q7Z736 793 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 AMOTL1Q8IY63 956 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 DDRGK1Q96HY6 314 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 CCDC17Q96LX7 622 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 HTATIP2Q9BUP3 242 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 PCDHB15Q9Y5E8 787 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 SLC4A4Q9Y6R1 1079 aa27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 RANBP2P49792 3224 aaKnown RBP27.46■■□□□ 1.99
CDKN2A-212ENST00000578845 SPDYE16A6NNV3 312 aaPredicted RBP27.45■■□□□ 1.98
CDKN2A-212ENST00000578845 CCNA1P78396 465 aa27.45■■□□□ 1.98
CDKN2A-212ENST00000578845 HABP4Q5JVS0 413 aaKnown RBP27.45■■□□□ 1.98
CDKN2A-212ENST00000578845 TRMT44Q8IYL2 757 aaKnown RBP27.45■■□□□ 1.98
CDKN2A-212ENST00000578845 CYP2D7A0A087X1C5 515 aa27.44■■□□□ 1.98
CDKN2A-212ENST00000578845 AKR1B1P15121 316 aa27.44■■□□□ 1.98
CDKN2A-212ENST00000578845 CYP2B6P20813 491 aa27.44■■□□□ 1.98
CDKN2A-212ENST00000578845 CDK8P49336 464 aa27.44■■□□□ 1.98
CDKN2A-212ENST00000578845 RRP1P56182 461 aaKnown RBP27.44■■□□□ 1.98
CDKN2A-212ENST00000578845 TRIM32Q13049 653 aa27.44■■□□□ 1.98
CDKN2A-212ENST00000578845 CCAR1Q8IX12 1150 aaKnown RBP27.44■■□□□ 1.98
CDKN2A-212ENST00000578845 MYH8P13535 1937 aa27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 H0YGN5 161 aa27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 SMIM22K7EJ46 135 aa27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 TFRCP02786 760 aaKnown RBP27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 RGS2P41220 211 aa27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 CTR9Q6PD62 1173 aa27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 SIAH1Q8IUQ4 282 aa27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 STRBPQ96SI9 672 aaKnown RBP27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 HMX1Q9NP08 348 aaPredicted RBP27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 BTBD7Q9P203 1132 aa27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 ARPP21Q9UBL0 812 aaPredicted RBP27.43■■□□□ 1.98
CDKN2A-212ENST00000578845 TSHZ3Q63HK5 1081 aa27.42■■□□□ 1.98
CDKN2A-212ENST00000578845 GIMAP6Q6P9H5 292 aa27.42■■□□□ 1.98
CDKN2A-212ENST00000578845 ANKLE1Q8NAG6 615 aa27.42■■□□□ 1.98
CDKN2A-212ENST00000578845 LPAR1Q92633 364 aa27.42■■□□□ 1.98
CDKN2A-212ENST00000578845 APBA2Q99767 749 aa27.42■■□□□ 1.98
CDKN2A-212ENST00000578845 TMX2Q9Y320 296 aa27.42■■□□□ 1.98
CDKN2A-212ENST00000578845 TTC41PQ6P2S7 1318 aa27.41■■□□□ 1.98
CDKN2A-212ENST00000578845 A0A0G2JMZ2 1700 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms