RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 C22orf23Q9BZE7 217 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 GPRC5DQ9NZD1 345 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 SLC4A4Q9Y6R1 1079 aa9.54□□□□□ -0.88
COPS3-215ENST00000578317 H7C1D1 291 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 PRKAB2O43741 272 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 SBK1Q52WX2 424 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 MORN1Q5T089 497 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 RNF20Q5VTR2 975 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 SH3RF3Q8TEJ3 882 aaPredicted RBP9.53□□□□□ -0.88
COPS3-215ENST00000578317 MYOZ2Q9NPC6 264 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 DCP1AQ9NPI6 582 aaPredicted RBP9.53□□□□□ -0.88
COPS3-215ENST00000578317 USP40Q9NVE5 1235 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 RBM8AQ9Y5S9 174 aaKnown RBP9.53□□□□□ -0.88
COPS3-215ENST00000578317 CHD4Q14839 1912 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 CFAP99D6REC4 459 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 WNT10BO00744 389 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 GPR37L1O60883 481 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 WDHD1O75717 1129 aaPredicted RBP9.53□□□□□ -0.88
COPS3-215ENST00000578317 DDNO94850 711 aaPredicted RBP9.53□□□□□ -0.88
COPS3-215ENST00000578317 APPP05067 770 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 MCCP23508 829 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 RBM5P52756 815 aaKnown RBP eCLIP9.53□□□□□ -0.88
COPS3-215ENST00000578317 TEX11Q8IYF3 940 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 LRRN4Q8WUT4 740 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 EPB41L4AQ9HCS5 686 aaPredicted RBP9.53□□□□□ -0.88
COPS3-215ENST00000578317 ANAPC4Q9UJX5 808 aa9.53□□□□□ -0.88
COPS3-215ENST00000578317 SBF1O95248 1867 aa9.52□□□□□ -0.88
COPS3-215ENST00000578317 SCN9AQ15858 1988 aa9.52□□□□□ -0.89
COPS3-215ENST00000578317 ZKSCAN1P17029 563 aaPredicted RBP9.52□□□□□ -0.89
COPS3-215ENST00000578317 IMMTQ16891 758 aaKnown RBP9.52□□□□□ -0.89
COPS3-215ENST00000578317 CREB3L3Q68CJ9 461 aa9.52□□□□□ -0.89
COPS3-215ENST00000578317 ADAMTS19Q8TE59 1207 aa9.52□□□□□ -0.89
COPS3-215ENST00000578317 TGFBRAP1Q8WUH2 860 aa9.52□□□□□ -0.89
COPS3-215ENST00000578317 SDR42E1Q8WUS8 393 aa9.52□□□□□ -0.89
COPS3-215ENST00000578317 PBXIP1Q96AQ6 731 aa9.52□□□□□ -0.89
COPS3-215ENST00000578317 NAPBQ9H115 298 aa9.52□□□□□ -0.89
COPS3-215ENST00000578317 DOCK2Q92608 1830 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 ZNF213O14771 459 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 SLC27A2O14975 620 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 MYO1BO43795 1136 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 ENTPD3O75355 529 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 CYP21A2P08686 494 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 PCP11498 1178 aaKnown RBP9.51□□□□□ -0.89
COPS3-215ENST00000578317 USP5P45974 858 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 NT5C2P49902 561 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 CTR9Q6PD62 1173 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 FAM83AQ86UY5 434 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 TDRD3Q9H7E2 651 aaKnown RBP9.51□□□□□ -0.89
COPS3-215ENST00000578317 ADARB2Q9NS39 739 aaKnown RBP9.51□□□□□ -0.89
COPS3-215ENST00000578317 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 PCDHAC2Q9Y5I4 1007 aa9.51□□□□□ -0.89
COPS3-215ENST00000578317 CCDC88AQ3V6T2 1871 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 USP17L21D6R901 530 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 FGRP09769 529 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 LMOD1P29536 600 aaPredicted RBP9.5□□□□□ -0.89
COPS3-215ENST00000578317 EPS15P42566 896 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 TDO2P48775 406 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 KRT32Q14532 448 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 NBPF9Q3BBW0 867 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 C12orf60Q5U649 245 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 SPNS2Q8IVW8 549 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 KIF2CQ99661 725 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 TM6SF1Q9BZW5 370 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 DHX36Q9H2U1 1008 aaKnown RBP9.5□□□□□ -0.89
COPS3-215ENST00000578317 ARPP21Q9UBL0 812 aaPredicted RBP9.5□□□□□ -0.89
COPS3-215ENST00000578317 ZNF70Q9UC06 446 aaPredicted RBP9.5□□□□□ -0.89
COPS3-215ENST00000578317 SLC27A5Q9Y2P5 690 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 SNX14Q9Y5W7 946 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 FLT1P17948 1338 aa9.5□□□□□ -0.89
COPS3-215ENST00000578317 SHTN1A0MZ66 631 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 VAC14Q08AM6 782 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 NFIAQ12857 509 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 USP50Q70EL3 339 aaPredicted RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 TTC6Q86TZ1 520 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 FAM151AQ8WW52 585 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 PRR14Q9BWN1 585 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 OSBPL5Q9H0X9 879 aaPredicted RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 MCM9Q9NXL9 1143 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 TMOD2Q9NZR1 351 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 PGAP2Q9UHJ9 254 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 PALD1Q9ULE6 856 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 TIAM2Q8IVF5 1701 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 DICER1Q9UPY3 1922 aaKnown RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 IQCA1LA6NCM1 817 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 EGFRP00533 1210 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 HMGB1P09429 215 aaKnown RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 HIRAP54198 1017 aaPredicted RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 KIF4BQ2VIQ3 1234 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 TBC1D10BQ4KMP7 808 aaPredicted RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 METTL16Q86W50 562 aaKnown RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 FOXP4Q8IVH2 680 aaPredicted RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 MAPKAPK5Q8IW41 473 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 AMOTL1Q8IY63 956 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 SYMPKQ92797 1274 aaKnown RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 RNF41Q9H4P4 317 aaPredicted RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 DDX4Q9NQI0 724 aaKnown RBP9.49□□□□□ -0.89
COPS3-215ENST00000578317 HACL1Q9UJ83 578 aa9.49□□□□□ -0.89
COPS3-215ENST00000578317 ATRNL1Q5VV63 1379 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms