RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 SLC44A5Q8NCS7 719 aa24.96■■□□□ 1.59
LITAF-205ENST00000570904 GCC1Q96CN9 775 aa24.96■■□□□ 1.59
LITAF-205ENST00000570904 KIAA1683Q9H0B3 1180 aa24.96■■□□□ 1.59
LITAF-205ENST00000570904 MPHOSPH10O00566 681 aaKnown RBP24.95■■□□□ 1.58
LITAF-205ENST00000570904 SGPL1O95470 568 aa24.95■■□□□ 1.58
LITAF-205ENST00000570904 VCAM1P19320 739 aa24.95■■□□□ 1.58
LITAF-205ENST00000570904 USP14P54578 494 aa24.95■■□□□ 1.58
LITAF-205ENST00000570904 Q3C1V9 767 aa24.95■■□□□ 1.58
LITAF-205ENST00000570904 UBE2Q1Q7Z7E8 422 aa24.95■■□□□ 1.58
LITAF-205ENST00000570904 DYNLL2Q96FJ2 89 aa24.95■■□□□ 1.58
LITAF-205ENST00000570904 DEFB118Q96PH6 123 aa24.95■■□□□ 1.58
LITAF-205ENST00000570904 USP17L15C9J2P7 530 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 USP17L13C9JLJ4 530 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 USP17L11C9JVI0 530 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 USP17L18D6R9N7 530 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 USP17L22D6RA61 530 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 USP17L17D6RBQ6 530 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 USP17L19D6RCP7 530 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 USP17L20D6RJB6 530 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 HMGCRP04035 888 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 USP17L24Q0WX57 530 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 GTF3C2Q8WUA4 911 aaPredicted RBP24.94■■□□□ 1.58
LITAF-205ENST00000570904 PORCNQ9H237 461 aa24.94■■□□□ 1.58
LITAF-205ENST00000570904 PAK6Q9NQU5 681 aaPredicted RBP24.94■■□□□ 1.58
LITAF-205ENST00000570904 PLXNB2O15031 1838 aa24.93■■□□□ 1.58
LITAF-205ENST00000570904 FARP2O94887 1054 aaPredicted RBP24.93■■□□□ 1.58
LITAF-205ENST00000570904 CYP2B6P20813 491 aa24.93■■□□□ 1.58
LITAF-205ENST00000570904 TRIM32Q13049 653 aa24.93■■□□□ 1.58
LITAF-205ENST00000570904 UBE3CQ15386 1083 aa24.93■■□□□ 1.58
LITAF-205ENST00000570904 DCTPP1Q9H773 170 aa24.93■■□□□ 1.58
LITAF-205ENST00000570904 ATP8A2Q9NTI2 1148 aa24.93■■□□□ 1.58
LITAF-205ENST00000570904 CYP2D7A0A087X1C5 515 aa24.92■■□□□ 1.58
LITAF-205ENST00000570904 SMIM22K7EJ46 135 aa24.92■■□□□ 1.58
LITAF-205ENST00000570904 CNMDO75829 334 aa24.92■■□□□ 1.58
LITAF-205ENST00000570904 TSHZ3Q63HK5 1081 aa24.92■■□□□ 1.58
LITAF-205ENST00000570904 CATSPERGQ6ZRH7 1159 aa24.92■■□□□ 1.58
LITAF-205ENST00000570904 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.92■■□□□ 1.583e-7■■□□□ 13.1
LITAF-205ENST00000570904 ECHDC1Q9NTX5 307 aa24.92■■□□□ 1.58
LITAF-205ENST00000570904 CEP290O15078 2479 aa24.92■■□□□ 1.58
LITAF-205ENST00000570904 H0YGN5 161 aa24.91■■□□□ 1.58
LITAF-205ENST00000570904 TFRCP02786 760 aaKnown RBP24.91■■□□□ 1.58
LITAF-205ENST00000570904 MAPK4P31152 587 aa24.91■■□□□ 1.58
LITAF-205ENST00000570904 CCAR1Q8IX12 1150 aaKnown RBP24.91■■□□□ 1.58
LITAF-205ENST00000570904 TRIB2Q92519 343 aa24.91■■□□□ 1.58
LITAF-205ENST00000570904 DPF3Q92784 378 aa24.91■■□□□ 1.58
LITAF-205ENST00000570904 NUDT12Q9BQG2 462 aa24.91■■□□□ 1.58
LITAF-205ENST00000570904 PUS7LQ9H0K6 701 aaKnown RBP24.91■■□□□ 1.58
LITAF-205ENST00000570904 RPAP3Q9H6T3 665 aaPredicted RBP24.91■■□□□ 1.58
LITAF-205ENST00000570904 SWAP70Q9UH65 585 aa24.91■■□□□ 1.58
LITAF-205ENST00000570904 MYH7P12883 1935 aa24.9■■□□□ 1.58
LITAF-205ENST00000570904 A0A1W2PRG0 241 aa24.9■■□□□ 1.58
LITAF-205ENST00000570904 HABP4Q5JVS0 413 aaKnown RBP24.9■■□□□ 1.58
LITAF-205ENST00000570904 ZSCAN25Q6NSZ9 544 aa24.9■■□□□ 1.58
LITAF-205ENST00000570904 GPR142Q7Z601 462 aa24.9■■□□□ 1.58
LITAF-205ENST00000570904 SOCS4Q8WXH5 440 aa24.9■■□□□ 1.58
LITAF-205ENST00000570904 RABGAP1Q9Y3P9 1069 aa24.9■■□□□ 1.58
LITAF-205ENST00000570904 SLC4A4Q9Y6R1 1079 aa24.9■■□□□ 1.58
LITAF-205ENST00000570904 BAZ2AQ9UIF9 1905 aaKnown RBP24.9■■□□□ 1.58
LITAF-205ENST00000570904 AKR1B1P15121 316 aa24.89■■□□□ 1.58
LITAF-205ENST00000570904 CLEC10AQ8IUN9 316 aa24.89■■□□□ 1.58
LITAF-205ENST00000570904 USP17L12C9JPN9 530 aa24.88■■□□□ 1.57
LITAF-205ENST00000570904 USP17L21D6R901 530 aa24.88■■□□□ 1.57
LITAF-205ENST00000570904 C12orf60Q5U649 245 aa24.88■■□□□ 1.57
LITAF-205ENST00000570904 TMEM179Q6ZVK1 233 aa24.88■■□□□ 1.57
LITAF-205ENST00000570904 PLEKHH3Q7Z736 793 aa24.88■■□□□ 1.57
LITAF-205ENST00000570904 GPATCH3Q96I76 525 aa24.88■■□□□ 1.57
LITAF-205ENST00000570904 HTATIP2Q9BUP3 242 aa24.88■■□□□ 1.57
LITAF-205ENST00000570904 CWC22Q9HCG8 908 aaKnown RBP24.88■■□□□ 1.57
LITAF-205ENST00000570904 SPDYE16A6NNV3 312 aaPredicted RBP24.87■■□□□ 1.57
LITAF-205ENST00000570904 MORN1Q5T089 497 aa24.87■■□□□ 1.57
LITAF-205ENST00000570904 AMOTL1Q8IY63 956 aa24.87■■□□□ 1.57
LITAF-205ENST00000570904 USP6NLQ92738 828 aa24.87■■□□□ 1.57
LITAF-205ENST00000570904 DDRGK1Q96HY6 314 aa24.87■■□□□ 1.57
LITAF-205ENST00000570904 CRISPLD2Q9H0B8 497 aa24.87■■□□□ 1.57
LITAF-205ENST00000570904 BTBD7Q9P203 1132 aa24.87■■□□□ 1.57
LITAF-205ENST00000570904 PCDHB15Q9Y5E8 787 aa24.87■■□□□ 1.57
LITAF-205ENST00000570904 RPTORQ8N122 1335 aa24.86■■□□□ 1.57
LITAF-205ENST00000570904 CDK8P49336 464 aa24.86■■□□□ 1.57
LITAF-205ENST00000570904 LBX2Q6XYB7 198 aa24.86■■□□□ 1.57
LITAF-205ENST00000570904 KBTBD3Q8NAB2 608 aa24.86■■□□□ 1.57
LITAF-205ENST00000570904 HMX1Q9NP08 348 aaPredicted RBP24.86■■□□□ 1.57
LITAF-205ENST00000570904 XRCC5P13010 732 aaKnown RBP24.85■■□□□ 1.57
LITAF-205ENST00000570904 PRKAR2AP13861 404 aaKnown RBP24.85■■□□□ 1.57
LITAF-205ENST00000570904 ZKSCAN1P17029 563 aaPredicted RBP24.85■■□□□ 1.57
LITAF-205ENST00000570904 RGS2P41220 211 aa24.85■■□□□ 1.57
LITAF-205ENST00000570904 CCNA1P78396 465 aa24.85■■□□□ 1.57
LITAF-205ENST00000570904 ICA1Q05084 483 aa24.85■■□□□ 1.57
LITAF-205ENST00000570904 CCL14Q16627 93 aa24.85■■□□□ 1.57
LITAF-205ENST00000570904 KIAA1755Q5JYT7 1200 aa24.85■■□□□ 1.57
LITAF-205ENST00000570904 WDR78Q5VTH9 848 aa24.85■■□□□ 1.57
LITAF-205ENST00000570904 C16orf86Q6ZW13 317 aa24.85■■□□□ 1.57
LITAF-205ENST00000570904 COLQQ9Y215 455 aaPredicted RBP24.85■■□□□ 1.57
LITAF-205ENST00000570904 MYH8P13535 1937 aa24.84■■□□□ 1.57
LITAF-205ENST00000570904 RRP1P56182 461 aaKnown RBP24.84■■□□□ 1.57
LITAF-205ENST00000570904 CTR9Q6PD62 1173 aa24.84■■□□□ 1.57
LITAF-205ENST00000570904 SIAH1Q8IUQ4 282 aa24.84■■□□□ 1.57
LITAF-205ENST00000570904 DIS3LQ8TF46 1054 aaKnown RBP24.84■■□□□ 1.57
LITAF-205ENST00000570904 APBA2Q99767 749 aa24.84■■□□□ 1.57
LITAF-205ENST00000570904 TANGO6Q9C0B7 1094 aa24.84■■□□□ 1.57
LITAF-205ENST00000570904 MAP3K21Q5TCX8 1036 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms