RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 GPRC5AQ8NFJ5 357 aa21.05■□□□□ 0.96
MAP1LC3B-207ENST00000565788 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.05■□□□□ 0.96
MAP1LC3B-207ENST00000565788 KIAA1683Q9H0B3 1180 aa21.05■□□□□ 0.96
MAP1LC3B-207ENST00000565788 SGPL1O95470 568 aa21.04■□□□□ 0.96
MAP1LC3B-207ENST00000565788 USP14P54578 494 aa21.04■□□□□ 0.96
MAP1LC3B-207ENST00000565788 ERVK-9P63128 1117 aa21.04■□□□□ 0.96
MAP1LC3B-207ENST00000565788 ERVK-24P63145 666 aa21.04■□□□□ 0.96
MAP1LC3B-207ENST00000565788 SEPT2Q15019 361 aa21.04■□□□□ 0.96
MAP1LC3B-207ENST00000565788 Q3C1V9 767 aa21.04■□□□□ 0.96
MAP1LC3B-207ENST00000565788 POTEDQ86YR6 584 aa21.04■□□□□ 0.96
MAP1LC3B-207ENST00000565788 SLC44A5Q8NCS7 719 aa21.04■□□□□ 0.96
MAP1LC3B-207ENST00000565788 GCC1Q96CN9 775 aa21.04■□□□□ 0.96
MAP1LC3B-207ENST00000565788 PAGR1Q9BTK6 254 aa21.04■□□□□ 0.96
MAP1LC3B-207ENST00000565788 USP17L15C9J2P7 530 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 USP17L13C9JLJ4 530 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 USP17L11C9JVI0 530 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 USP17L18D6R9N7 530 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 USP17L22D6RA61 530 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 USP17L17D6RBQ6 530 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 USP17L19D6RCP7 530 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 USP17L20D6RJB6 530 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 VCAM1P19320 739 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 USP17L24Q0WX57 530 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 UBE3CQ15386 1083 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 GTF3C2Q8WUA4 911 aaPredicted RBP21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 PAK6Q9NQU5 681 aaPredicted RBP21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 ATP8A2Q9NTI2 1148 aa21.03■□□□□ 0.96
MAP1LC3B-207ENST00000565788 MPHOSPH10O00566 681 aaKnown RBP21.02■□□□□ 0.96
MAP1LC3B-207ENST00000565788 HMGCRP04035 888 aa21.02■□□□□ 0.96
MAP1LC3B-207ENST00000565788 TRIM32Q13049 653 aa21.02■□□□□ 0.96
MAP1LC3B-207ENST00000565788 CATSPERGQ6ZRH7 1159 aa21.02■□□□□ 0.96
MAP1LC3B-207ENST00000565788 DYNLL2Q96FJ2 89 aa21.02■□□□□ 0.96
MAP1LC3B-207ENST00000565788 DEFB118Q96PH6 123 aa21.02■□□□□ 0.96
MAP1LC3B-207ENST00000565788 PORCNQ9H237 461 aa21.02■□□□□ 0.96
MAP1LC3B-207ENST00000565788 DCTPP1Q9H773 170 aa21.02■□□□□ 0.96
MAP1LC3B-207ENST00000565788 SMIM22K7EJ46 135 aa21.01■□□□□ 0.95
MAP1LC3B-207ENST00000565788 CNMDO75829 334 aa21.01■□□□□ 0.95
MAP1LC3B-207ENST00000565788 FARP2O94887 1054 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3B-207ENST00000565788 CYP2B6P20813 491 aa21.01■□□□□ 0.95
MAP1LC3B-207ENST00000565788 TRIB2Q92519 343 aa21.01■□□□□ 0.95
MAP1LC3B-207ENST00000565788 NUDT12Q9BQG2 462 aa21.01■□□□□ 0.95
MAP1LC3B-207ENST00000565788 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.01■□□□□ 0.957e-17■■■■■ 27.9
MAP1LC3B-207ENST00000565788 ECHDC1Q9NTX5 307 aa21.01■□□□□ 0.95
MAP1LC3B-207ENST00000565788 SWAP70Q9UH65 585 aa21.01■□□□□ 0.95
MAP1LC3B-207ENST00000565788 CYP2D7A0A087X1C5 515 aa21■□□□□ 0.95
MAP1LC3B-207ENST00000565788 A0A1W2PRG0 241 aa21■□□□□ 0.95
MAP1LC3B-207ENST00000565788 MAPK4P31152 587 aa21■□□□□ 0.95
MAP1LC3B-207ENST00000565788 TSHZ3Q63HK5 1081 aa21■□□□□ 0.95
MAP1LC3B-207ENST00000565788 ZSCAN25Q6NSZ9 544 aa21■□□□□ 0.95
MAP1LC3B-207ENST00000565788 SOCS4Q8WXH5 440 aa21■□□□□ 0.95
MAP1LC3B-207ENST00000565788 PUS7LQ9H0K6 701 aaKnown RBP21■□□□□ 0.95
MAP1LC3B-207ENST00000565788 H0YGN5 161 aa20.99■□□□□ 0.95
MAP1LC3B-207ENST00000565788 TFRCP02786 760 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3B-207ENST00000565788 HABP4Q5JVS0 413 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3B-207ENST00000565788 GPR142Q7Z601 462 aa20.99■□□□□ 0.95
MAP1LC3B-207ENST00000565788 DPF3Q92784 378 aa20.99■□□□□ 0.95
MAP1LC3B-207ENST00000565788 RPAP3Q9H6T3 665 aaPredicted RBP20.99■□□□□ 0.95
MAP1LC3B-207ENST00000565788 RABGAP1Q9Y3P9 1069 aa20.99■□□□□ 0.95
MAP1LC3B-207ENST00000565788 SLC4A4Q9Y6R1 1079 aa20.99■□□□□ 0.95
MAP1LC3B-207ENST00000565788 AKR1B1P15121 316 aa20.98■□□□□ 0.95
MAP1LC3B-207ENST00000565788 C12orf60Q5U649 245 aa20.98■□□□□ 0.95
MAP1LC3B-207ENST00000565788 TMEM179Q6ZVK1 233 aa20.98■□□□□ 0.95
MAP1LC3B-207ENST00000565788 PLEKHH3Q7Z736 793 aa20.98■□□□□ 0.95
MAP1LC3B-207ENST00000565788 CLEC10AQ8IUN9 316 aa20.98■□□□□ 0.95
MAP1LC3B-207ENST00000565788 CCAR1Q8IX12 1150 aaKnown RBP20.98■□□□□ 0.95
MAP1LC3B-207ENST00000565788 HTATIP2Q9BUP3 242 aa20.98■□□□□ 0.95
MAP1LC3B-207ENST00000565788 CRISPLD2Q9H0B8 497 aa20.98■□□□□ 0.95
MAP1LC3B-207ENST00000565788 SPDYE16A6NNV3 312 aaPredicted RBP20.97■□□□□ 0.95
MAP1LC3B-207ENST00000565788 USP17L12C9JPN9 530 aa20.97■□□□□ 0.95
MAP1LC3B-207ENST00000565788 USP17L21D6R901 530 aa20.97■□□□□ 0.95
MAP1LC3B-207ENST00000565788 LBX2Q6XYB7 198 aa20.97■□□□□ 0.95
MAP1LC3B-207ENST00000565788 USP6NLQ92738 828 aa20.97■□□□□ 0.95
MAP1LC3B-207ENST00000565788 HMX1Q9NP08 348 aaPredicted RBP20.97■□□□□ 0.95
MAP1LC3B-207ENST00000565788 BTBD7Q9P203 1132 aa20.97■□□□□ 0.95
MAP1LC3B-207ENST00000565788 PCDHB15Q9Y5E8 787 aa20.97■□□□□ 0.95
MAP1LC3B-207ENST00000565788 RPTORQ8N122 1335 aa20.97■□□□□ 0.95
MAP1LC3B-207ENST00000565788 RLFQ13129 1914 aa20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 CEP290O15078 2479 aa20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 XRCC5P13010 732 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 CDK8P49336 464 aa20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 KIAA1755Q5JYT7 1200 aa20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 MORN1Q5T089 497 aa20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 C16orf86Q6ZW13 317 aa20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 AMOTL1Q8IY63 956 aa20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 KBTBD3Q8NAB2 608 aa20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 DDRGK1Q96HY6 314 aa20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 GPATCH3Q96I76 525 aa20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 CWC22Q9HCG8 908 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3B-207ENST00000565788 CAPN2P17655 700 aa20.95■□□□□ 0.94
MAP1LC3B-207ENST00000565788 RRP1P56182 461 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3B-207ENST00000565788 CCNA1P78396 465 aa20.95■□□□□ 0.94
MAP1LC3B-207ENST00000565788 CTR9Q6PD62 1173 aa20.95■□□□□ 0.94
MAP1LC3B-207ENST00000565788 SIAH1Q8IUQ4 282 aa20.95■□□□□ 0.94
MAP1LC3B-207ENST00000565788 COLQQ9Y215 455 aaPredicted RBP20.95■□□□□ 0.94
MAP1LC3B-207ENST00000565788 A0A0G2JMZ2 1700 aa20.95■□□□□ 0.94
MAP1LC3B-207ENST00000565788 ALPK3Q96L96 1907 aa20.94■□□□□ 0.94
MAP1LC3B-207ENST00000565788 PRKAR2AP13861 404 aaKnown RBP20.94■□□□□ 0.94
MAP1LC3B-207ENST00000565788 ZKSCAN1P17029 563 aaPredicted RBP20.94■□□□□ 0.94
MAP1LC3B-207ENST00000565788 RGS2P41220 211 aa20.94■□□□□ 0.94
MAP1LC3B-207ENST00000565788 ICA1Q05084 483 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms