RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 PDE4BQ07343 736 aa6.46□□□□□ -1.38
LRRC28-218ENST00000560236 RALGPS1Q5JS13 557 aa6.46□□□□□ -1.38
LRRC28-218ENST00000560236 CREG2Q8IUH2 290 aa6.46□□□□□ -1.38
LRRC28-218ENST00000560236 MYLIPQ8WY64 445 aa6.46□□□□□ -1.38
LRRC28-218ENST00000560236 EPB41L4BQ9H329 900 aa6.46□□□□□ -1.38
LRRC28-218ENST00000560236 TMEM59LQ9UK28 342 aa6.46□□□□□ -1.38
LRRC28-218ENST00000560236 AK5Q9Y6K8 562 aa6.46□□□□□ -1.38
LRRC28-218ENST00000560236 KRT1P04264 644 aa6.45□□□□□ -1.38
LRRC28-218ENST00000560236 TMEM253P0C7T8 217 aa6.45□□□□□ -1.38
LRRC28-218ENST00000560236 ZSCAN22P10073 491 aaPredicted RBP6.45□□□□□ -1.38
LRRC28-218ENST00000560236 TSNAXIP1Q2TAA8 658 aa6.45□□□□□ -1.38
LRRC28-218ENST00000560236 LCNL1Q6ZST4 164 aa6.45□□□□□ -1.38
LRRC28-218ENST00000560236 WASH4PA8MWX3 477 aa6.44□□□□□ -1.38
LRRC28-218ENST00000560236 ERVFC1P60507 584 aa6.44□□□□□ -1.38
LRRC28-218ENST00000560236 SIAH1Q8IUQ4 282 aa6.44□□□□□ -1.38
LRRC28-218ENST00000560236 MCATQ8IVS2 390 aaKnown RBP6.44□□□□□ -1.38
LRRC28-218ENST00000560236 DNAJB8Q8NHS0 232 aa6.44□□□□□ -1.38
LRRC28-218ENST00000560236 DUSP9Q99956 384 aaKnown RBP6.44□□□□□ -1.38
LRRC28-218ENST00000560236 ADAMTS10Q9H324 1103 aa6.44□□□□□ -1.38
LRRC28-218ENST00000560236 TRIT1Q9H3H1 467 aaKnown RBP6.44□□□□□ -1.38
LRRC28-218ENST00000560236 KCNK12Q9HB15 430 aa6.44□□□□□ -1.38
LRRC28-218ENST00000560236 CEP131Q9UPN4 1083 aa6.44□□□□□ -1.38
LRRC28-218ENST00000560236 NPIPB6E9PJ23 425 aa6.43□□□□□ -1.38
LRRC28-218ENST00000560236 TFE3P19532 575 aaPredicted RBP6.43□□□□□ -1.38
LRRC28-218ENST00000560236 TPP2P29144 1249 aaPredicted RBP6.43□□□□□ -1.38
LRRC28-218ENST00000560236 RPL6Q02878 288 aaKnown RBP6.43□□□□□ -1.38
LRRC28-218ENST00000560236 JARID2Q92833 1246 aaPredicted RBP6.43□□□□□ -1.38
LRRC28-218ENST00000560236 Q96M66 194 aa6.43□□□□□ -1.38
LRRC28-218ENST00000560236 DUSP15Q9H1R2 295 aaPredicted RBP6.43□□□□□ -1.38
LRRC28-218ENST00000560236 GPATCH2Q9NW75 528 aa6.43□□□□□ -1.38
LRRC28-218ENST00000560236 ADAM30Q9UKF2 790 aa6.43□□□□□ -1.38
LRRC28-218ENST00000560236 HPXP02790 462 aa6.42□□□□□ -1.38
LRRC28-218ENST00000560236 RLBP1P12271 317 aa6.42□□□□□ -1.38
LRRC28-218ENST00000560236 GAB4Q2WGN9 574 aa6.42□□□□□ -1.38
LRRC28-218ENST00000560236 DIEXFQ68CQ4 756 aaKnown RBP6.42□□□□□ -1.38
LRRC28-218ENST00000560236 ATG14Q6ZNE5 492 aa6.42□□□□□ -1.38
LRRC28-218ENST00000560236 ACSF2Q96CM8 615 aaPredicted RBP6.42□□□□□ -1.38
LRRC28-218ENST00000560236 RNF19AQ9NV58 838 aa6.42□□□□□ -1.38
LRRC28-218ENST00000560236 DUSP13Q9UII6 198 aa6.42□□□□□ -1.38
LRRC28-218ENST00000560236 TCAF2A6NFQ2 919 aa6.41□□□□□ -1.38
LRRC28-218ENST00000560236 TRHRP34981 398 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-218ENST00000560236 KCNA10Q16322 511 aa6.41□□□□□ -1.38
LRRC28-218ENST00000560236 MEI1Q5TIA1 1274 aa6.41□□□□□ -1.38
LRRC28-218ENST00000560236 CD320Q9NPF0 282 aa6.41□□□□□ -1.38
LRRC28-218ENST00000560236 KCNH3Q9ULD8 1083 aa6.41□□□□□ -1.38
LRRC28-218ENST00000560236 ETV2O00321 342 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-218ENST00000560236 MED14OSP0DP75 135 aa6.4□□□□□ -1.38
LRRC28-218ENST00000560236 EGR3Q06889 387 aa6.4□□□□□ -1.38
LRRC28-218ENST00000560236 EAPPQ56P03 285 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-218ENST00000560236 DTWD2Q8NBA8 298 aa6.4□□□□□ -1.38
LRRC28-218ENST00000560236 PPP1R13LQ8WUF5 828 aa6.4□□□□□ -1.38
LRRC28-218ENST00000560236 CYB5D2Q8WUJ1 264 aa6.4□□□□□ -1.38
LRRC28-218ENST00000560236 KCNN1Q92952 543 aa6.4□□□□□ -1.38
LRRC28-218ENST00000560236 SLC26A8Q96RN1 970 aa6.4□□□□□ -1.38
LRRC28-218ENST00000560236 GPR62Q9BZJ7 368 aa6.4□□□□□ -1.38
LRRC28-218ENST00000560236 TLR6Q9Y2C9 796 aa6.4□□□□□ -1.38
LRRC28-218ENST00000560236 CORINQ9Y5Q5 1042 aa6.4□□□□□ -1.38
LRRC28-218ENST00000560236 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 SRFP11831 508 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 PLCG1P19174 1290 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 GLDCP23378 1020 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 LTKP29376 864 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 YARSP54577 528 aaKnown RBP6.39□□□□□ -1.39
LRRC28-218ENST00000560236 CIAPIN1Q6FI81 312 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 LILRA6Q6PI73 481 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 TSPYL5Q86VY4 417 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-218ENST00000560236 AMIGO3Q86WK7 504 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 OXR1Q8N573 874 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 FAM13CQ8NE31 585 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 PDZD8Q8NEN9 1154 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 SYTL4Q96C24 671 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-218ENST00000560236 NOC4LQ9BVI4 516 aaKnown RBP6.39□□□□□ -1.39
LRRC28-218ENST00000560236 RNF32Q9H0A6 362 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 C19orf44Q9H6X5 657 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 SMG5Q9UPR3 1016 aaKnown RBP6.39□□□□□ -1.39
LRRC28-218ENST00000560236 CECR2Q9BXF3 1484 aa6.39□□□□□ -1.39
LRRC28-218ENST00000560236 ANKRD33BA6NCL7 494 aa6.38□□□□□ -1.39
LRRC28-218ENST00000560236 UPK3BL1B0FP48 263 aa6.38□□□□□ -1.39
LRRC28-218ENST00000560236 PATL2C9JE40 543 aaKnown RBP6.38□□□□□ -1.39
LRRC28-218ENST00000560236 UPK3BL2E5RIL1 263 aa6.38□□□□□ -1.39
LRRC28-218ENST00000560236 BPNT1O95861 308 aa6.38□□□□□ -1.39
LRRC28-218ENST00000560236 ZGLP1P0C6A0 271 aa6.38□□□□□ -1.39
LRRC28-218ENST00000560236 TAF1CQ15572 869 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-218ENST00000560236 CCDC84Q86UT8 332 aaPredicted RBP6.38□□□□□ -1.39
LRRC28-218ENST00000560236 CC2D2AQ9P2K1 1620 aa6.38□□□□□ -1.39
LRRC28-218ENST00000560236 BICRAQ9NZM4 1560 aa6.37□□□□□ -1.39
LRRC28-218ENST00000560236 TNNI2P48788 182 aa6.37□□□□□ -1.39
LRRC28-218ENST00000560236 ST13P50502 369 aaKnown RBP6.37□□□□□ -1.39
LRRC28-218ENST00000560236 PSMD2Q13200 908 aa6.37□□□□□ -1.39
LRRC28-218ENST00000560236 BNC2Q6ZN30 1099 aaPredicted RBP6.37□□□□□ -1.39
LRRC28-218ENST00000560236 LILRA2Q8N149 483 aa6.37□□□□□ -1.39
LRRC28-218ENST00000560236 PHC3Q8NDX5 983 aa6.37□□□□□ -1.39
LRRC28-218ENST00000560236 RNF141Q8WVD5 230 aa6.37□□□□□ -1.39
LRRC28-218ENST00000560236 DHX38Q92620 1227 aaKnown RBP6.37□□□□□ -1.39
LRRC28-218ENST00000560236 SP110Q9HB58 689 aa6.37□□□□□ -1.39
LRRC28-218ENST00000560236 PARP2Q9UGN5 583 aa6.37□□□□□ -1.39
LRRC28-218ENST00000560236 PCDHA11Q9Y5I1 949 aa6.37□□□□□ -1.39
LRRC28-218ENST00000560236 FITM1A5D6W6 292 aa6.36□□□□□ -1.39
LRRC28-218ENST00000560236 NUAK1O60285 661 aa6.36□□□□□ -1.39
LRRC28-218ENST00000560236 LRRN2O75325 713 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms