RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 DTHD1Q6ZMT9 781 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 CSGALNACT2Q8N6G5 542 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 ZCRB1Q8TBF4 217 aaKnown RBP7.96□□□□□ -1.13
USP3-210ENST00000559192 SYMPKQ92797 1274 aaKnown RBP7.96□□□□□ -1.13
USP3-210ENST00000559192 OSBP2Q969R2 916 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 COPRSQ9NQ92 184 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 ADAM21Q9UKJ8 722 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 NRXN1Q9ULB1 1477 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 KIF28PB7ZC32 967 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 KIF3CO14782 793 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 PTPN12Q05209 780 aaKnown RBP7.96□□□□□ -1.13
USP3-210ENST00000559192 TYW1BQ6NUM6 668 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 TTLL7Q6ZT98 887 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 EEF2KMTQ96G04 330 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 NAP1L3Q99457 506 aaPredicted RBP7.96□□□□□ -1.13
USP3-210ENST00000559192 JAG2Q9Y219 1238 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 CAPN7Q9Y6W3 813 aa7.96□□□□□ -1.13
USP3-210ENST00000559192 BICDL2A1A5D9 508 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 GCOM1H8Y6P7 765 aaPredicted RBP7.96□□□□□ -1.14
USP3-210ENST00000559192 MYZAPP0CAP1 466 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 CYP2C19P33261 490 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 PDE4DQ08499 809 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 C2orf54Q08AI8 447 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 WDR24Q96S15 920 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 PUS7LQ9H0K6 701 aaKnown RBP7.96□□□□□ -1.14
USP3-210ENST00000559192 STX8Q9UNK0 236 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 ADGRB1O14514 1584 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 NEBLO76041 1014 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 CPS1P31327 1500 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 GUCY2FP51841 1108 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 SPATA1Q5VX52 437 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 STOX1Q6ZVD7 989 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 NRKQ7Z2Y5 1582 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 EXOC4Q96A65 974 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.96□□□□□ -1.14
USP3-210ENST00000559192 SAMM50Q9Y512 469 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 NEXMIFQ5QGS0 1516 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 PRR29P0C7W0 189 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 VPS36Q86VN1 386 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 CAPS2Q9BXY5 557 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.96□□□□□ -1.14
USP3-210ENST00000559192 SERPINA10Q9UK55 444 aa7.96□□□□□ -1.14
USP3-210ENST00000559192 KIF4AO95239 1232 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 GNAT2P19087 354 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 MAP2K2P36507 400 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 NAPAP54920 295 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 CASP8Q14790 479 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 NYAP1Q6ZVC0 841 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 POTEDQ86YR6 584 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 USP32Q8NFA0 1604 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 TMEM2Q9UHN6 1383 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 FOXN1O15353 648 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 ZPR1O75312 459 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 TSPY3P0CV98 308 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 TSPY8P0CW00 308 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 B4GALNT4Q76KP1 1039 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 KLHL7Q8IXQ5 586 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 LRRN4CLQ8ND94 238 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 ORAI2Q96SN7 254 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 VWDEQ8N2E2 1590 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 E7EVH7 732 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 AP1ARQ63HQ0 302 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 KCTD16Q68DU8 428 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 CPLX4Q7Z7G2 160 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 GSPT2Q8IYD1 628 aaKnown RBP7.95□□□□□ -1.14
USP3-210ENST00000559192 BCAS4Q8TDM0 211 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 BPIFA3Q9BQP9 254 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 TCHPQ9BT92 498 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 RAB34Q9BZG1 259 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 ZBTB12Q9Y330 459 aaPredicted RBP7.95□□□□□ -1.14
USP3-210ENST00000559192 DEPDC5O75140 1603 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 INO80Q9ULG1 1556 aaPredicted RBP7.95□□□□□ -1.14
USP3-210ENST00000559192 CCDC151A5D8V7 595 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 CASP1P29466 404 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 MRPS25P82663 173 aaKnown RBP7.95□□□□□ -1.14
USP3-210ENST00000559192 CCDC51Q96ER9 411 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 CRNKL1Q9BZJ0 848 aaKnown RBP7.95□□□□□ -1.14
USP3-210ENST00000559192 MED4Q9NPJ6 270 aa7.95□□□□□ -1.14
USP3-210ENST00000559192 ARHGAP31Q2M1Z3 1444 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 ZNF76P36508 570 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 NR5A1Q13285 461 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 MTF1Q14872 753 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 PTPROQ16827 1216 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 SMARCC2Q8TAQ2 1214 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 FAM207AQ9NSI2 230 aaPredicted RBP7.94□□□□□ -1.14
USP3-210ENST00000559192 MRFAP1Q9Y605 127 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 MED23Q9ULK4 1368 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 KIF20BQ96Q89 1820 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 A0A0G2JLW4 131 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 TRIM66O15016 1216 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 BUB1O43683 1085 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 CALM1P0DP23 149 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 CALM2P0DP24 149 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 CALM3P0DP25 149 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 E2F4Q16254 413 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 LETM2Q2VYF4 491 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 NBPF14Q5TI25 921 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 RESP18Q5W5W9 173 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 APOA5Q6Q788 366 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 PCDHB6Q9Y5E3 794 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms