RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 INPP5BP32019 993 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 TSGA10IPQ3SY00 556 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 SYMPKQ92797 1274 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 BPIFA3Q9BQP9 254 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 HNRNPH2P55795 449 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 CNNM4Q6P4Q7 775 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 RGS22Q8NE09 1264 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 ENOX1Q8TC92 643 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 KAT6BQ8WYB5 2073 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 MED4Q9NPJ6 270 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 UBE3CQ15386 1083 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 PI16Q6UXB8 463 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 HAUS4Q9H6D7 363 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 MROH5Q6ZUA9 1318 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 COBLO75128 1261 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 NF2P35240 595 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 PPFIA1Q13136 1202 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 EPN1Q9Y6I3 576 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 MAGEA1P43355 309 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 RNASE9P60153 205 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 CCDC114Q96M63 670 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 FOXP1Q9H334 677 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 FBXO3Q9UK99 471 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 TBCAO75347 108 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 HPDP32754 393 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 TNNI2P48788 182 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 GIGYF2Q6Y7W6 1299 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 JAG2Q9Y219 1238 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 TRAF5O00463 557 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 FMNL1O95466 1100 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 CTSWP56202 376 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 IFT20Q8IY31 132 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 SMYD4Q8IYR2 804 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 LMBR1Q8WVP7 490 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 NOX5Q96PH1 765 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 ADGRB2O60241 1585 aa16.81■□□□□ 0.28
ARHGEF40-207ENST00000556399 SH2B2O14492 632 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 CCZ1BP86790 482 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 CCZ1P86791 482 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 TICAM2Q86XR7 235 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 DENND2AQ9ULE3 1009 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 TNKSO95271 1327 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 TMEM232C9JQI7 657 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 ARMCX5Q6P1M9 558 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 CPLX4Q7Z7G2 160 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 CEP57Q86XR8 500 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 CTNNBL1Q8WYA6 563 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 GSDMAQ96QA5 445 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 IFIH1Q9BYX4 1025 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 NRKQ7Z2Y5 1582 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 ACTN2P35609 894 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 COPB1P53618 953 aaKnown RBP16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 RAPGEF1Q13905 1077 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 CCDC155Q8N6L0 562 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 GBP2P32456 591 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 CETN1Q12798 172 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 NBPF5PQ86XG9 351 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
ARHGEF40-207ENST00000556399 PCCAP05165 728 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 TYW1BQ6NUM6 668 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 A6NNZ2 444 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 CCNT1O60563 726 aaKnown RBP16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 TUBB8Q3ZCM7 444 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 ZBTB38Q8NAP3 1195 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 EXOC4Q96A65 974 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 FAM204AQ9H8W3 233 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 GTPBP6O43824 516 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 ERCC3P19447 782 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 PHKA1P46020 1223 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 NR5A1Q13285 461 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 ZRSR2Q15696 482 aaKnown RBP16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 CUL5Q93034 780 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 H7C1D1 291 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 PTGDRQ13258 359 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 MSL1Q68DK7 614 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 ACRBPQ8NEB7 543 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 ERMNQ8TAM6 284 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 UBLCP1Q8WVY7 318 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 FAM207AQ9NSI2 230 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 RRP15Q9Y3B9 282 aaKnown RBP16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 MYOM1P52179 1685 aa16.79■□□□□ 0.28
ARHGEF40-207ENST00000556399 ENC1O14682 589 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 MMP1P03956 469 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 TOGARAM2Q6ZUX3 1019 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 ACSBG1Q96GR2 724 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 NLRP3Q96P20 1036 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 CPS1P31327 1500 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 ADD2P35612 726 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 ZSCAN10Q96SZ4 725 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 ERVV-2B6SEH9 535 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 CCDC172P0C7W6 258 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 HMGB2P26583 209 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 RESP18Q5W5W9 173 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 C2CD5Q86YS7 1000 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 DDX17Q92841 729 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 SELENOSQ9BQE4 189 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 FUCA2Q9BTY2 467 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms