RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 ZPR1O75312 459 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 PRDM1O75626 825 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 PFKFB1P16118 471 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 NBPF11Q86T75 865 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 DHX40Q8IX18 779 aaKnown RBP10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 NUP133Q8WUM0 1156 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 SDF4Q9BRK5 362 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 BAZ2AQ9UIF9 1905 aaKnown RBP10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 NID2Q14112 1375 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 KIF2AO00139 706 aaPredicted RBP10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 MAGEA9P43362 315 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 SEC23AQ15436 765 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 RTN1Q16799 776 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 ZNF654Q8IZM8 581 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 NSUN4Q96CB9 384 aaKnown RBP10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 NYXQ9GZU5 481 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 ANAPC4Q9UJX5 808 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 STK36Q9NRP7 1315 aa10.31□□□□□ -0.76
AL049839.2-201ENST00000553947 BTBD18B2RXH4 712 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 ZNF202O95125 648 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 PRDX5P30044 214 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 MECOMQ03112 1051 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 SHC4Q6S5L8 630 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 LRRN4CLQ8ND94 238 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 FAM212AQ96EL1 285 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 CLIC6Q96NY7 704 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 RNF41Q9H4P4 317 aaPredicted RBP10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 RTCBQ9Y3I0 505 aaKnown RBP10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 TNKSO95271 1327 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 COL24A1Q17RW2 1714 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 NEMFO60524 1076 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 CMA1P23946 247 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 ACTN2P35609 894 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 SKIDA1Q1XH10 827 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 NYAP1Q6ZVC0 841 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 CRACR2BQ8N4Y2 399 aaPredicted RBP10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 FANCBQ8NB91 859 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 SHISA4Q96DD7 197 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 ERICH2A1L162 156 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 RGL2O15211 777 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 IVLP07476 585 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 HIBADHP31937 336 aaKnown RBP10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 TOB1P50616 345 aaPredicted RBP10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 TRIM29Q14134 588 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 DPCR1Q3MIW9 517 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 TPTE2Q6XPS3 522 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 CCAR2Q8N163 923 aaKnown RBP10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 ENAHQ8N8S7 591 aaPredicted RBP10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 ANKRD20A12PQ8NF67 263 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 UBAC1Q9BSL1 405 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 ANO10Q9NW15 660 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 AATFQ9NY61 560 aaKnown RBP eCLIP10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 KIAA1468Q9P260 1216 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 ADAM21Q9UKJ8 722 aa10.3□□□□□ -0.76
AL049839.2-201ENST00000553947 TNRC6CQ9HCJ0 1690 aaKnown RBP10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 USP17L12C9JPN9 530 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 USP17L21D6R901 530 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 BIN1O00499 593 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 CAVIN2O95810 425 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 MMP1P03956 469 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 MAP2K2P36507 400 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 PPM1EQ8WY54 764 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 SUFUQ9UMX1 484 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 MYH2Q9UKX2 1941 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 NHSQ6T4R5 1651 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 THSD7AQ9UPZ6 1657 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 DUOX1Q9NRD9 1551 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 BECN2A8MW95 431 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 EIF3CLB5ME19 914 aaKnown RBP10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 NR5A1Q13285 461 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 DNAJC21Q5F1R6 531 aaKnown RBP10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 DIS3L2Q8IYB7 885 aaKnown RBP10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 AOPEPQ8N6M6 819 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 OXER1Q8TDS5 423 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 ESR2Q92731 530 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 EIF3CQ99613 913 aaKnown RBP10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 BRIP1Q9BX63 1249 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 IRS2Q9Y4H2 1338 aa10.29□□□□□ -0.76
AL049839.2-201ENST00000553947 hCG_1642624A0A1W2PR95 340 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 PPP6R2O75170 966 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 NOSTRINQ8IVI9 506 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 HPSEQ9Y251 543 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 MYH13Q9UKX3 1938 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 CYP2D6P10635 497 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 GRIN1Q05586 938 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 SPECC1Q5M775 1068 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 ISM2Q6H9L7 571 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 TMTC2Q8N394 836 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 ZSCAN10Q96SZ4 725 aaPredicted RBP10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 MTA3Q9BTC8 594 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 DONSONQ9NYP3 566 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 EP400Q96L91 3159 aa10.28□□□□□ -0.76
AL049839.2-201ENST00000553947 NMT2O60551 498 aa10.27□□□□□ -0.76
AL049839.2-201ENST00000553947 URI1O94763 535 aaPredicted RBP10.27□□□□□ -0.76
AL049839.2-201ENST00000553947 ZRANB2O95218 330 aaKnown RBP eCLIP10.27□□□□□ -0.76
AL049839.2-201ENST00000553947 SLC3A2P08195 630 aaKnown RBP10.27□□□□□ -0.76
AL049839.2-201ENST00000553947 MNAT1P51948 309 aa10.27□□□□□ -0.76
AL049839.2-201ENST00000553947 SLC4A8Q2Y0W8 1093 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms