RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 UNC93B1Q9H1C4 597 aa11.27□□□□□ -0.61
YBX3-218ENST00000546298 CWC22Q9HCG8 908 aaKnown RBP11.27□□□□□ -0.61
YBX3-218ENST00000546298 RBPJLQ9UBG7 517 aa11.27□□□□□ -0.61
YBX3-218ENST00000546298 GJD2Q9UKL4 321 aa11.27□□□□□ -0.61
YBX3-218ENST00000546298 RABGAP1Q9Y3P9 1069 aa11.27□□□□□ -0.61
YBX3-218ENST00000546298 PDE4DIPQ5VU43 2346 aa11.27□□□□□ -0.61
YBX3-218ENST00000546298 PRKAB2O43741 272 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 GLRX3O76003 335 aaKnown RBP11.26□□□□□ -0.61
YBX3-218ENST00000546298 SLC34A2O95436 690 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 HMGCRP04035 888 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 ERVK-24P63145 666 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 SEPT2Q15019 361 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 CATSPERGQ6ZRH7 1159 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 ACER1Q8TDN7 264 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 PAGR1Q9BTK6 254 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 SH2D4AQ9H788 454 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 TXNRD2Q9NNW7 524 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 ZBTB47Q9UFB7 747 aaPredicted RBP11.26□□□□□ -0.61
YBX3-218ENST00000546298 SLC4A4Q9Y6R1 1079 aa11.26□□□□□ -0.61
YBX3-218ENST00000546298 DOCK1Q14185 1865 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 USP17L12C9JPN9 530 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 USP17L21D6R901 530 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 ERC2O15083 957 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 TFRCP02786 760 aaKnown RBP11.25□□□□□ -0.61
YBX3-218ENST00000546298 ZFYP08048 801 aaPredicted RBP11.25□□□□□ -0.61
YBX3-218ENST00000546298 CYP2D6P10635 497 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 XRCC5P13010 732 aaKnown RBP11.25□□□□□ -0.61
YBX3-218ENST00000546298 VCAM1P19320 739 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 GUCY1A2P33402 732 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 C12orf60Q5U649 245 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 KBTBD3Q8NAB2 608 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 SHISA4Q96DD7 197 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 DEFB118Q96PH6 123 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 ARHGEF10LQ9HCE6 1279 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 HOXC10Q9NYD6 342 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 MAST2Q6P0Q8 1798 aa11.25□□□□□ -0.61
YBX3-218ENST00000546298 RNF113AO15541 343 aaKnown RBP11.24□□□□□ -0.61
YBX3-218ENST00000546298 FARP2O94887 1054 aaPredicted RBP11.24□□□□□ -0.61
YBX3-218ENST00000546298 CYP2B6P20813 491 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 RGS2P41220 211 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 CDK8P49336 464 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 RRP1P56182 461 aaKnown RBP11.24□□□□□ -0.61
YBX3-218ENST00000546298 COG2Q14746 738 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 Q3C1V9 767 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 GIMAP6Q6P9H5 292 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 LBX2Q6XYB7 198 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 PLEKHH3Q7Z736 793 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 APPBP2Q92624 585 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 LPAR1Q92633 364 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 DPF3Q92784 378 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 DYNLL2Q96FJ2 89 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.24□□□□□ -0.61
YBX3-218ENST00000546298 PUS7LQ9H0K6 701 aaKnown RBP11.24□□□□□ -0.61
YBX3-218ENST00000546298 RPAP3Q9H6T3 665 aaPredicted RBP11.24□□□□□ -0.61
YBX3-218ENST00000546298 HMX1Q9NP08 348 aaPredicted RBP11.24□□□□□ -0.61
YBX3-218ENST00000546298 PAK6Q9NQU5 681 aaPredicted RBP11.24□□□□□ -0.61
YBX3-218ENST00000546298 ARPP21Q9UBL0 812 aaPredicted RBP11.24□□□□□ -0.61
YBX3-218ENST00000546298 TTC41PQ6P2S7 1318 aa11.24□□□□□ -0.61
YBX3-218ENST00000546298 GNAT2P19087 354 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 ICA1Q05084 483 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 CTR9Q6PD62 1173 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 C16orf86Q6ZW13 317 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 GPR142Q7Z601 462 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 SLC44A5Q8NCS7 719 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 STRBPQ96SI9 672 aaKnown RBP11.23□□□□□ -0.61
YBX3-218ENST00000546298 KANSL2Q9H9L4 492 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 PCDHB15Q9Y5E8 787 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 NR2E3Q9Y5X4 410 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 IVNS1ABPQ9Y6Y0 642 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 RPTORQ8N122 1335 aa11.23□□□□□ -0.61
YBX3-218ENST00000546298 A0A1W2PRG0 241 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 SLC15A5A6NIM6 579 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
YBX3-218ENST00000546298 PEX10O60683 326 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 AKR1B1P15121 316 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 ZKSCAN1P17029 563 aaPredicted RBP11.22□□□□□ -0.61
YBX3-218ENST00000546298 MAP2K5Q13163 448 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 SBK1Q52WX2 424 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 MORN1Q5T089 497 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 WDR78Q5VTH9 848 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 UBE2Q1Q7Z7E8 422 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 MB21D1Q8N884 522 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 ANKLE1Q8NAG6 615 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 TRIB2Q92519 343 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 APBA2Q99767 749 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 TANGO6Q9C0B7 1094 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 CRISPLD2Q9H0B8 497 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 PORCNQ9H237 461 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 ZNF287Q9HBT7 754 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 TMX2Q9Y320 296 aa11.22□□□□□ -0.61
YBX3-218ENST00000546298 CYP2D7A0A087X1C5 515 aa11.21□□□□□ -0.61
YBX3-218ENST00000546298 CHGBP05060 677 aa11.21□□□□□ -0.61
YBX3-218ENST00000546298 EVX2Q03828 476 aa11.21□□□□□ -0.61
YBX3-218ENST00000546298 AAMPQ13685 434 aa11.21□□□□□ -0.61
YBX3-218ENST00000546298 MFSD14CQ5VZR4 134 aa11.21□□□□□ -0.61
YBX3-218ENST00000546298 USP6NLQ92738 828 aa11.21□□□□□ -0.61
YBX3-218ENST00000546298 OSBP2Q969R2 916 aa11.21□□□□□ -0.61
YBX3-218ENST00000546298 NACAP1Q9BZK3 213 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms