RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 PPP2R5BQ15173 497 aa16.09■□□□□ 0.17
SCARB1-209ENST00000545305 MYL10Q9BUA6 226 aa16.09■□□□□ 0.17
SCARB1-209ENST00000545305 DEFB129Q9H1M3 183 aa16.09■□□□□ 0.17
SCARB1-209ENST00000545305 CABP5Q9NP86 173 aa16.09■□□□□ 0.17
SCARB1-209ENST00000545305 IL17RBQ9NRM6 502 aa16.09■□□□□ 0.17
SCARB1-209ENST00000545305 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
SCARB1-209ENST00000545305 TOP1P11387 765 aaKnown RBP16.08■□□□□ 0.16
SCARB1-209ENST00000545305 RXRAP19793 462 aa16.08■□□□□ 0.16
SCARB1-209ENST00000545305 NUCB2P80303 420 aa16.08■□□□□ 0.16
SCARB1-209ENST00000545305 ABCB5Q2M3G0 1257 aa16.08■□□□□ 0.16
SCARB1-209ENST00000545305 RCSD1Q6JBY9 416 aa16.08■□□□□ 0.16
SCARB1-209ENST00000545305 TMEM179Q6ZVK1 233 aa16.08■□□□□ 0.16
SCARB1-209ENST00000545305 USP50Q70EL3 339 aaPredicted RBP16.08■□□□□ 0.16
SCARB1-209ENST00000545305 CCDC144CPQ8IYA2 1237 aa16.08■□□□□ 0.16
SCARB1-209ENST00000545305 FAM184AQ8NB25 1140 aa16.08■□□□□ 0.16
SCARB1-209ENST00000545305 PNMA1Q8ND90 353 aa16.08■□□□□ 0.16
SCARB1-209ENST00000545305 NSUN7Q8NE18 718 aaKnown RBP16.08■□□□□ 0.16
SCARB1-209ENST00000545305 CTCFLQ8NI51 663 aaPredicted RBP16.08■□□□□ 0.16
SCARB1-209ENST00000545305 CEP95Q96GE4 821 aa16.08■□□□□ 0.16
SCARB1-209ENST00000545305 RBM28Q9NW13 759 aaKnown RBP16.08■□□□□ 0.16
SCARB1-209ENST00000545305 GREB1LQ9C091 1923 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-209ENST00000545305 IGKV6D-41A0A0C4DH26 115 aa16.07■□□□□ 0.16
SCARB1-209ENST00000545305 TTLL1O95922 423 aa16.07■□□□□ 0.16
SCARB1-209ENST00000545305 PDCP20941 246 aa16.07■□□□□ 0.16
SCARB1-209ENST00000545305 EPHX2P34913 555 aa16.07■□□□□ 0.16
SCARB1-209ENST00000545305 HIRAP54198 1017 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-209ENST00000545305 DCAF15Q66K64 600 aa16.07■□□□□ 0.16
SCARB1-209ENST00000545305 DCPSQ96C86 337 aaKnown RBP16.07■□□□□ 0.16
SCARB1-209ENST00000545305 MTMR4Q9NYA4 1195 aa16.07■□□□□ 0.16
SCARB1-209ENST00000545305 SCN4AP35499 1836 aa16.07■□□□□ 0.16
SCARB1-209ENST00000545305 WDR90Q96KV7 1748 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 JAK2O60674 1132 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 GDF11O95390 407 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 SLURP2P0DP57 97 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
SCARB1-209ENST00000545305 KIF5BP33176 963 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 CDAN1Q8IWY9 1227 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 FANCBQ8NB91 859 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 SMARCC2Q8TAQ2 1214 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 TEPSINQ96N21 525 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 TMEM47Q9BQJ4 181 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCARB1-209ENST00000545305 KANSL2Q9H9L4 492 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 PGAP2Q9UHJ9 254 aa16.06■□□□□ 0.16
SCARB1-209ENST00000545305 SCAF8Q9UPN6 1271 aaKnown RBP16.06■□□□□ 0.16
SCARB1-209ENST00000545305 CTDNEP1O95476 244 aa16.05■□□□□ 0.16
SCARB1-209ENST00000545305 CDC27P30260 824 aa16.05■□□□□ 0.16
SCARB1-209ENST00000545305 NOVP48745 357 aa16.05■□□□□ 0.16
SCARB1-209ENST00000545305 ATP2B2Q01814 1243 aa16.05■□□□□ 0.16
SCARB1-209ENST00000545305 TROAPQ12815 778 aa16.05■□□□□ 0.16
SCARB1-209ENST00000545305 MIGA2Q7L4E1 593 aa16.05■□□□□ 0.16
SCARB1-209ENST00000545305 SULF1Q8IWU6 871 aa16.05■□□□□ 0.16
SCARB1-209ENST00000545305 DDX11Q96FC9 970 aa16.05■□□□□ 0.16
SCARB1-209ENST00000545305 MAP3K14Q99558 947 aa16.05■□□□□ 0.16
SCARB1-209ENST00000545305 WDR33Q9C0J8 1336 aaKnown RBP16.04■□□□□ 0.16
SCARB1-209ENST00000545305 GH2P01242 217 aa16.04■□□□□ 0.16
SCARB1-209ENST00000545305 ADD1P35611 737 aaKnown RBP16.04■□□□□ 0.16
SCARB1-209ENST00000545305 MAP3K10Q02779 954 aa16.04■□□□□ 0.16
SCARB1-209ENST00000545305 ICA1Q05084 483 aa16.04■□□□□ 0.16
SCARB1-209ENST00000545305 SEPT2Q15019 361 aa16.04■□□□□ 0.16
SCARB1-209ENST00000545305 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
SCARB1-209ENST00000545305 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
SCARB1-209ENST00000545305 ZNF341Q9BYN7 854 aa16.04■□□□□ 0.16
SCARB1-209ENST00000545305 NYAP2Q9P242 653 aa16.04■□□□□ 0.16
SCARB1-209ENST00000545305 CLIP2Q9UDT6 1046 aa16.04■□□□□ 0.16
SCARB1-209ENST00000545305 STK36Q9NRP7 1315 aa16.03■□□□□ 0.16
SCARB1-209ENST00000545305 IFNAR1P17181 557 aa16.03■□□□□ 0.16
SCARB1-209ENST00000545305 GNAQP50148 359 aa16.03■□□□□ 0.16
SCARB1-209ENST00000545305 SSRP1Q08945 709 aaKnown RBP16.03■□□□□ 0.16
SCARB1-209ENST00000545305 GRM4Q14833 912 aa16.03■□□□□ 0.16
SCARB1-209ENST00000545305 RAB3GAP1Q15042 981 aa16.03■□□□□ 0.16
SCARB1-209ENST00000545305 SUPT20HL1Q3ZLR7 823 aa16.03■□□□□ 0.16
SCARB1-209ENST00000545305 NBPF12Q5TAG4 269 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-209ENST00000545305 CLEC10AQ8IUN9 316 aa16.03■□□□□ 0.16
SCARB1-209ENST00000545305 ZC3H15Q8WU90 426 aaKnown RBP16.03■□□□□ 0.16
SCARB1-209ENST00000545305 TAF1DQ9H5J8 278 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-209ENST00000545305 FAM217BQ9NTX9 383 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-209ENST00000545305 ORC3Q9UBD5 711 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-209ENST00000545305 ZBTB21Q9ULJ3 1066 aa16.03■□□□□ 0.16
SCARB1-209ENST00000545305 MTMR7Q9Y216 660 aa16.03■□□□□ 0.16
SCARB1-209ENST00000545305 SRCAPQ6ZRS2 3230 aa16.02■□□□□ 0.16
SCARB1-209ENST00000545305 MYH4Q9Y623 1939 aa16.02■□□□□ 0.16
SCARB1-209ENST00000545305 STX6O43752 255 aa16.02■□□□□ 0.16
SCARB1-209ENST00000545305 SYT1P21579 422 aa16.02■□□□□ 0.16
SCARB1-209ENST00000545305 CAP2P40123 477 aa16.02■□□□□ 0.16
SCARB1-209ENST00000545305 AKAP17AQ02040 695 aaKnown RBP16.02■□□□□ 0.16
SCARB1-209ENST00000545305 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.16
SCARB1-209ENST00000545305 LARP1BQ659C4 914 aaKnown RBP16.02■□□□□ 0.16
SCARB1-209ENST00000545305 TMTC3Q6ZXV5 915 aa16.02■□□□□ 0.16
SCARB1-209ENST00000545305 LRRC47Q8N1G4 583 aaKnown RBP16.02■□□□□ 0.16
SCARB1-209ENST00000545305 WASF1Q92558 559 aa16.02■□□□□ 0.16
SCARB1-209ENST00000545305 SLC26A6Q9BXS9 759 aa16.02■□□□□ 0.16
SCARB1-209ENST00000545305 ARHGEF10LQ9HCE6 1279 aa16.02■□□□□ 0.16
SCARB1-209ENST00000545305 GINM1Q9NU53 330 aa16.02■□□□□ 0.16
SCARB1-209ENST00000545305 VPS37CA5D8V6 355 aaPredicted RBP16.01■□□□□ 0.15
SCARB1-209ENST00000545305 H3BQV1 296 aa16.01■□□□□ 0.15
SCARB1-209ENST00000545305 DTNBO60941 627 aa16.01■□□□□ 0.15
SCARB1-209ENST00000545305 FMNL1O95466 1100 aaPredicted RBP16.01■□□□□ 0.15
SCARB1-209ENST00000545305 ASNSP08243 561 aa16.01■□□□□ 0.15
SCARB1-209ENST00000545305 PARP1P09874 1014 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms