RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 ZNF804BA4D1E1 1349 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 PTPRZ1P23471 2315 aaPredicted RBP8.87□□□□□ -0.99
LDHA-223ENST00000545215 GOLGA8CPA6NN73 597 aa8.86□□□□□ -0.99
LDHA-223ENST00000545215 PDHXO00330 501 aa8.86□□□□□ -0.99
LDHA-223ENST00000545215 RBM25P49756 843 aaKnown RBP8.86□□□□□ -0.99
LDHA-223ENST00000545215 PTK7Q13308 1070 aa8.86□□□□□ -0.99
LDHA-223ENST00000545215 VGLL4Q14135 290 aa8.86□□□□□ -0.99
LDHA-223ENST00000545215 ST3GAL2Q16842 350 aa8.86□□□□□ -0.99
LDHA-223ENST00000545215 SLFNL1Q499Z3 407 aa8.86□□□□□ -0.99
LDHA-223ENST00000545215 GJD3Q8N144 294 aa8.86□□□□□ -0.99
LDHA-223ENST00000545215 NUDT12Q9BQG2 462 aa8.86□□□□□ -0.99
LDHA-223ENST00000545215 ATP5J2-PTCD1G3V325 749 aa8.85□□□□□ -0.99
LDHA-223ENST00000545215 TNPO2O14787 897 aaKnown RBP8.85□□□□□ -0.99
LDHA-223ENST00000545215 LZTS3O60299 673 aaPredicted RBP8.85□□□□□ -0.99
LDHA-223ENST00000545215 TRIM32Q13049 653 aa8.85□□□□□ -0.99
LDHA-223ENST00000545215 NCOA4Q13772 614 aa8.85□□□□□ -0.99
LDHA-223ENST00000545215 DACT2Q5SW24 774 aa8.85□□□□□ -0.99
LDHA-223ENST00000545215 RNF135Q8IUD6 432 aa8.85□□□□□ -0.99
LDHA-223ENST00000545215 PLPP7Q8NBV4 271 aa8.85□□□□□ -0.99
LDHA-223ENST00000545215 MXD3Q9BW11 206 aa8.85□□□□□ -0.99
LDHA-223ENST00000545215 PBX4Q9BYU1 374 aa8.85□□□□□ -0.99
LDHA-223ENST00000545215 SENP6Q9GZR1 1112 aaPredicted RBP8.85□□□□□ -0.99
LDHA-223ENST00000545215 PCDHB9Q9Y5E1 797 aa8.85□□□□□ -0.99
LDHA-223ENST00000545215 MAP3K15Q6ZN16 1313 aa8.85□□□□□ -0.99
LDHA-223ENST00000545215 PROB1E7EW31 1015 aa8.84□□□□□ -0.99
LDHA-223ENST00000545215 KCNQ3O43525 872 aa8.84□□□□□ -0.99
LDHA-223ENST00000545215 EPHB4P54760 987 aa8.84□□□□□ -0.99
LDHA-223ENST00000545215 MICALL1Q8N3F8 863 aa8.84□□□□□ -0.99
LDHA-223ENST00000545215 ZKSCAN4Q969J2 545 aaPredicted RBP8.84□□□□□ -0.99
LDHA-223ENST00000545215 SPSB2Q99619 263 aa8.84□□□□□ -0.99
LDHA-223ENST00000545215 UTP14AQ9BVJ6 771 aaKnown RBP8.84□□□□□ -0.99
LDHA-223ENST00000545215 FAM86C1Q9NVL1 165 aa8.84□□□□□ -0.99
LDHA-223ENST00000545215 KCNH4Q9UQ05 1017 aa8.84□□□□□ -0.99
LDHA-223ENST00000545215 MYO3BQ8WXR4 1341 aa8.84□□□□□ -0.99
LDHA-223ENST00000545215 ZNF292O60281 2723 aa8.84□□□□□ -0.99
LDHA-223ENST00000545215 FASNP49327 2511 aaKnown RBP8.84□□□□□ -0.99
LDHA-223ENST00000545215 DCXO43602 365 aa8.83□□□□□ -1
LDHA-223ENST00000545215 SNRPA1P09661 255 aaKnown RBP8.83□□□□□ -1
LDHA-223ENST00000545215 TPRP12270 2363 aaKnown RBP8.83□□□□□ -1
LDHA-223ENST00000545215 HCLS1P14317 486 aaPredicted RBP8.83□□□□□ -1
LDHA-223ENST00000545215 RASA1P20936 1047 aa8.83□□□□□ -1
LDHA-223ENST00000545215 RTP1P59025 263 aa8.83□□□□□ -1
LDHA-223ENST00000545215 TEFQ10587 303 aa8.83□□□□□ -1
LDHA-223ENST00000545215 PARP10Q53GL7 1025 aa8.83□□□□□ -1
LDHA-223ENST00000545215 ASCL5Q7RTU5 278 aa8.83□□□□□ -1
LDHA-223ENST00000545215 ERO1BQ86YB8 467 aa8.83□□□□□ -1
LDHA-223ENST00000545215 FAM178BQ8IXR5 827 aa8.83□□□□□ -1
LDHA-223ENST00000545215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.83□□□□□ -15e-17■□□□□ 9.6
LDHA-223ENST00000545215 WNT2BQ93097 391 aa8.83□□□□□ -1
LDHA-223ENST00000545215 PRDM9Q9NQV7 894 aa8.83□□□□□ -1
LDHA-223ENST00000545215 CSADQ9Y600 493 aa8.83□□□□□ -1
LDHA-223ENST00000545215 GPR179Q6PRD1 2367 aa8.83□□□□□ -1
LDHA-223ENST00000545215 MTHFSDQ2M296 383 aaKnown RBP8.82□□□□□ -1
LDHA-223ENST00000545215 MAP7D1Q3KQU3 841 aa8.82□□□□□ -1
LDHA-223ENST00000545215 MAP3K21Q5TCX8 1036 aa8.82□□□□□ -1
LDHA-223ENST00000545215 DGLUCYQ7Z3D6 616 aa8.82□□□□□ -1
LDHA-223ENST00000545215 ADAM32Q8TC27 787 aa8.82□□□□□ -1
LDHA-223ENST00000545215 CELF1Q92879 486 aaKnown RBP8.82□□□□□ -1
LDHA-223ENST00000545215 CLP1Q92989 425 aaKnown RBP8.82□□□□□ -1
LDHA-223ENST00000545215 COA7Q96BR5 231 aa8.82□□□□□ -1
LDHA-223ENST00000545215 CARD14Q9BXL6 1004 aa8.82□□□□□ -1
LDHA-223ENST00000545215 MYO9BQ13459 2157 aa8.82□□□□□ -1
LDHA-223ENST00000545215 CHD7Q9P2D1 2997 aa8.82□□□□□ -1
LDHA-223ENST00000545215 CEMIPQ8WUJ3 1361 aa8.82□□□□□ -1
LDHA-223ENST00000545215 TRIM43BA6NCK2 446 aa8.81□□□□□ -1
LDHA-223ENST00000545215 UFL1O94874 794 aa8.81□□□□□ -1
LDHA-223ENST00000545215 HSPA5P11021 654 aaKnown RBP8.81□□□□□ -1
LDHA-223ENST00000545215 POU3F3P20264 500 aaPredicted RBP8.81□□□□□ -1
LDHA-223ENST00000545215 PPIL2Q13356 520 aa8.81□□□□□ -1
LDHA-223ENST00000545215 TRAF7Q6Q0C0 670 aa8.81□□□□□ -1
LDHA-223ENST00000545215 SH3BP5LQ7L8J4 393 aa8.81□□□□□ -1
LDHA-223ENST00000545215 ANKMY2Q8IV38 441 aa8.81□□□□□ -1
LDHA-223ENST00000545215 IL17REQ8NFR9 667 aa8.81□□□□□ -1
LDHA-223ENST00000545215 FAM200AQ8TCP9 573 aa8.81□□□□□ -1
LDHA-223ENST00000545215 TRIM43Q96BQ3 446 aaPredicted RBP8.81□□□□□ -1
LDHA-223ENST00000545215 PARK7Q99497 189 aaKnown RBP8.81□□□□□ -1
LDHA-223ENST00000545215 ARHGAP9Q9BRR9 750 aa8.81□□□□□ -1
LDHA-223ENST00000545215 IRF2BPLQ9H1B7 796 aa8.81□□□□□ -1
LDHA-223ENST00000545215 PRDM5Q9NQX1 630 aaPredicted RBP8.81□□□□□ -1
LDHA-223ENST00000545215 ACACBO00763 2458 aa8.81□□□□□ -1
LDHA-223ENST00000545215 COL4A1P02462 1669 aa8.81□□□□□ -1
LDHA-223ENST00000545215 PLXNA1Q9UIW2 1896 aa8.81□□□□□ -1
LDHA-223ENST00000545215 RASA3Q14644 834 aa8.8□□□□□ -1
LDHA-223ENST00000545215 DLGAP5Q15398 846 aa8.8□□□□□ -1
LDHA-223ENST00000545215 STRIP1Q5VSL9 837 aa8.8□□□□□ -1
LDHA-223ENST00000545215 CCDC129Q6ZRS4 1044 aa8.8□□□□□ -1
LDHA-223ENST00000545215 TTLL7Q6ZT98 887 aa8.8□□□□□ -1
LDHA-223ENST00000545215 NGEFQ8N5V2 710 aa8.8□□□□□ -1
LDHA-223ENST00000545215 GGA1Q9UJY5 639 aa8.8□□□□□ -1
LDHA-223ENST00000545215 ATP11BQ9Y2G3 1177 aa8.8□□□□□ -1
LDHA-223ENST00000545215 SNCAIPQ9Y6H5 919 aa8.8□□□□□ -1
LDHA-223ENST00000545215 NCOR2Q9Y618 2525 aa8.8□□□□□ -1
LDHA-223ENST00000545215 SIPA1L3O60292 1781 aaPredicted RBP8.8□□□□□ -1
LDHA-223ENST00000545215 PRR23AA6NEV1 266 aa8.8□□□□□ -1
LDHA-223ENST00000545215 GRXCR1A8MXD5 290 aa8.8□□□□□ -1
LDHA-223ENST00000545215 CYP2C8P10632 490 aa8.8□□□□□ -1
LDHA-223ENST00000545215 ARID4AP29374 1257 aaPredicted RBP8.8□□□□□ -1
LDHA-223ENST00000545215 MOGSQ13724 837 aa8.8□□□□□ -1
LDHA-223ENST00000545215 EML3Q32P44 896 aa8.8□□□□□ -1
LDHA-223ENST00000545215 KIF6Q6ZMV9 814 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms