RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 CSRNP2Q9H175 543 aa21.32■■□□□ 1
COPS7A-215ENST00000543155 FANCLQ9NW38 375 aa21.32■■□□□ 1
COPS7A-215ENST00000543155 AATFQ9NY61 560 aaKnown RBP eCLIP21.32■■□□□ 1
COPS7A-215ENST00000543155 RPS6KA4O75676 772 aa21.31■■□□□ 1
COPS7A-215ENST00000543155 BMP15O95972 392 aa21.31■■□□□ 1
COPS7A-215ENST00000543155 NCBP1Q09161 790 aaKnown RBP21.31■■□□□ 1
COPS7A-215ENST00000543155 VSTM4Q8IW00 320 aa21.31■■□□□ 1
COPS7A-215ENST00000543155 ATP8A2Q9NTI2 1148 aa21.31■■□□□ 1
COPS7A-215ENST00000543155 V9GY48 417 aaPredicted RBP21.31■■□□□ 1
COPS7A-215ENST00000543155 MORC3Q14149 939 aa21.31■■□□□ 1
COPS7A-215ENST00000543155 DCP1AQ9NPI6 582 aaPredicted RBP21.31■■□□□ 1
COPS7A-215ENST00000543155 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
COPS7A-215ENST00000543155 CNTNAP5Q8WYK1 1306 aa21.3■■□□□ 1
COPS7A-215ENST00000543155 KIF18AQ8NI77 898 aa21.3■■□□□ 1
COPS7A-215ENST00000543155 CCDC34Q96HJ3 373 aa21.3■■□□□ 1
COPS7A-215ENST00000543155 PPP1R13BQ96KQ4 1090 aa21.3■■□□□ 1
COPS7A-215ENST00000543155 TFCP2L1Q9NZI6 479 aa21.3■■□□□ 1
COPS7A-215ENST00000543155 SRP68Q9UHB9 627 aaKnown RBP21.3■■□□□ 1
COPS7A-215ENST00000543155 FAM205CA6NFA0 338 aa21.29■■□□□ 1
COPS7A-215ENST00000543155 CTCFLQ8NI51 663 aaPredicted RBP21.29■■□□□ 1
COPS7A-215ENST00000543155 NHSQ6T4R5 1651 aa21.29■■□□□ 1
COPS7A-215ENST00000543155 ZBTB22O15209 634 aa21.29■■□□□ 1
COPS7A-215ENST00000543155 ZPR1O75312 459 aa21.29■■□□□ 1
COPS7A-215ENST00000543155 SBK1Q52WX2 424 aa21.29■■□□□ 1
COPS7A-215ENST00000543155 SMIM5Q71RC9 77 aa21.29■■□□□ 1
COPS7A-215ENST00000543155 ARID3AQ99856 593 aa21.29■■□□□ 1
COPS7A-215ENST00000543155 SBF2Q86WG5 1849 aa21.29■■□□□ 1
COPS7A-215ENST00000543155 hCG_1642624A0A1W2PR95 340 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 CCP110O43303 1012 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 VPS72Q15906 364 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 EARS2Q5JPH6 523 aaKnown RBP21.28■■□□□ 1
COPS7A-215ENST00000543155 PDILTQ8N807 584 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 ENOX1Q8TC92 643 aaKnown RBP21.28■■□□□ 1
COPS7A-215ENST00000543155 FERMT2Q96AC1 680 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 TNRC6CQ9HCJ0 1690 aaKnown RBP21.28■■□□□ 1
COPS7A-215ENST00000543155 TUBB4AP04350 444 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 TOP1P11387 765 aaKnown RBP21.28■■□□□ 1
COPS7A-215ENST00000543155 PRDX5P30044 214 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 TPTE2Q6XPS3 522 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 USP49Q70CQ1 688 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 GRAMD1CQ8IYS0 662 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 SPATA20Q8TB22 786 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 TNFRSF25Q93038 417 aa21.28■■□□□ 1
COPS7A-215ENST00000543155 GNPATO15228 680 aa21.27■■□□□ 1
COPS7A-215ENST00000543155 PPP4R3BQ5MIZ7 849 aa21.26■□□□□ 0.99
COPS7A-215ENST00000543155 SPTY2D1Q68D10 685 aaPredicted RBP21.26■□□□□ 0.99
COPS7A-215ENST00000543155 TMEM232C9JQI7 657 aa21.26■□□□□ 0.99
COPS7A-215ENST00000543155 ZNF18P17022 549 aa21.26■□□□□ 0.99
COPS7A-215ENST00000543155 PLCD1P51178 756 aa21.26■□□□□ 0.99
COPS7A-215ENST00000543155 EVX2Q03828 476 aa21.26■□□□□ 0.99
COPS7A-215ENST00000543155 FMR1Q06787 632 aaKnown RBP eCLIP21.26■□□□□ 0.99
COPS7A-215ENST00000543155 NPY5RQ15761 445 aa21.26■□□□□ 0.99
COPS7A-215ENST00000543155 SRBD1Q8N5C6 995 aaKnown RBP21.26■□□□□ 0.99
COPS7A-215ENST00000543155 TMX1Q9H3N1 280 aa21.26■□□□□ 0.99
COPS7A-215ENST00000543155 NFE2L3Q9Y4A8 694 aa21.26■□□□□ 0.99
COPS7A-215ENST00000543155 IRS2Q9Y4H2 1338 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 NMT2O60551 498 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 ZNF827Q17R98 1081 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 CT47A1Q5JQC4 288 aaPredicted RBP21.25■□□□□ 0.99
COPS7A-215ENST00000543155 FAM47AQ5JRC9 791 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 TTC38Q5R3I4 469 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 DHX58Q96C10 678 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 INTS13Q9NVM9 706 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 TAF1LQ8IZX4 1826 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 SLFN14P0C7P3 912 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 CYP2D6P10635 497 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 ERCC5P28715 1186 aaPredicted RBP21.25■□□□□ 0.99
COPS7A-215ENST00000543155 PTF1AQ7RTS3 328 aa21.25■□□□□ 0.99
COPS7A-215ENST00000543155 DZIP1Q86YF9 867 aaKnown RBP21.25■□□□□ 0.99
COPS7A-215ENST00000543155 IGSF3O75054 1194 aa21.24■□□□□ 0.99
COPS7A-215ENST00000543155 SCG2P13521 617 aa21.24■□□□□ 0.99
COPS7A-215ENST00000543155 NT5C2P49902 561 aa21.24■□□□□ 0.99
COPS7A-215ENST00000543155 SYMPKQ92797 1274 aaKnown RBP21.24■□□□□ 0.99
COPS7A-215ENST00000543155 EPSTI1Q96J88 318 aa21.24■□□□□ 0.99
COPS7A-215ENST00000543155 RTCBQ9Y3I0 505 aaKnown RBP21.24■□□□□ 0.99
COPS7A-215ENST00000543155 A0A087X0B3 334 aa21.23■□□□□ 0.99
COPS7A-215ENST00000543155 TSPY2A6NKD2 308 aa21.23■□□□□ 0.99
COPS7A-215ENST00000543155 CDK11BP21127 795 aaKnown RBP21.23■□□□□ 0.99
COPS7A-215ENST00000543155 TM4SF1P30408 202 aa21.23■□□□□ 0.99
COPS7A-215ENST00000543155 SH3RF1Q7Z6J0 888 aa21.23■□□□□ 0.99
COPS7A-215ENST00000543155 FCHSD1Q86WN1 690 aa21.23■□□□□ 0.99
COPS7A-215ENST00000543155 TRAPPC10P48553 1259 aa21.23■□□□□ 0.99
COPS7A-215ENST00000543155 ATP2C1P98194 919 aaPredicted RBP21.23■□□□□ 0.99
COPS7A-215ENST00000543155 TBX2Q13207 712 aaPredicted RBP21.23■□□□□ 0.99
COPS7A-215ENST00000543155 PFKFB3Q16875 520 aaPredicted RBP21.23■□□□□ 0.99
COPS7A-215ENST00000543155 CCDC24Q8N4L8 307 aa21.23■□□□□ 0.99
COPS7A-215ENST00000543155 CGNQ9P2M7 1197 aaKnown RBP21.23■□□□□ 0.99
COPS7A-215ENST00000543155 LY75O60449 1722 aa21.22■□□□□ 0.99
COPS7A-215ENST00000543155 NAV1Q8NEY1 1877 aa21.22■□□□□ 0.99
COPS7A-215ENST00000543155 WNT7AO00755 349 aa21.22■□□□□ 0.99
COPS7A-215ENST00000543155 KIF5BP33176 963 aa21.22■□□□□ 0.99
COPS7A-215ENST00000543155 ZNF174Q15697 407 aa21.22■□□□□ 0.99
COPS7A-215ENST00000543155 TXNRD3Q86VQ6 643 aa21.22■□□□□ 0.99
COPS7A-215ENST00000543155 TRMT44Q8IYL2 757 aaKnown RBP21.22■□□□□ 0.99
COPS7A-215ENST00000543155 PAGE5Q96GU1 130 aa21.22■□□□□ 0.99
COPS7A-215ENST00000543155 ERO1AQ96HE7 468 aa21.22■□□□□ 0.99
COPS7A-215ENST00000543155 MCM9Q9NXL9 1143 aa21.22■□□□□ 0.99
COPS7A-215ENST00000543155 CCNL1Q9UK58 526 aaPredicted RBP21.22■□□□□ 0.99
COPS7A-215ENST00000543155 NLRP5P59047 1200 aa21.22■□□□□ 0.99
COPS7A-215ENST00000543155 PIP4K2BP78356 416 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 291.6 ms