RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 TMTC2Q8N394 836 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 PIH1D3Q9NQM4 214 aaKnown RBP14.6□□□□□ -0.07
MSH6-210ENST00000540021 NEDD4P46934 1319 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 GOLGA6CA6NDK9 693 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 GOLGA6L10A6NI86 522 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 H7C1W4 665 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 PSMA7O14818 248 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 GOLGA6DP0CG33 693 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 LIG3P49916 1009 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 FANCBQ8NB91 859 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 JAKMIP2Q96AA8 810 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 GOLGA6AQ9NYA3 693 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 FEZ2Q9UHY8 353 aaPredicted RBP14.6□□□□□ -0.07
MSH6-210ENST00000540021 ADGRG1Q9Y653 693 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 ERBB3P21860 1342 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 CYP27B1O15528 508 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 RNF40O75150 1001 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 VSNL1P62760 191 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 TBC1D8BQ0IIM8 1120 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.6□□□□□ -0.07
MSH6-210ENST00000540021 SAR1BQ9Y6B6 198 aa14.6□□□□□ -0.07
MSH6-210ENST00000540021 ADAMTS13Q76LX8 1427 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 KCNJ18B7U540 433 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 ZPR1O75312 459 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 MMP1P03956 469 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 KCNJ12Q14500 433 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 RAD9BQ6WBX8 426 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 MAATS1Q7Z4T9 603 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 NAA15Q9BXJ9 866 aaKnown RBP14.59□□□□□ -0.07
MSH6-210ENST00000540021 HDAC6Q9UBN7 1215 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 UBN2Q6ZU65 1347 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 ASIC1P78348 528 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 MORC3Q14149 939 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 AMOTL1Q8IY63 956 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 TUBE1Q9UJT0 475 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 ADGRL3Q9HAR2 1447 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 FAM205CA6NFA0 338 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 CLSTN1O94985 981 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 ADD2P35612 726 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 KRT83P78385 493 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 PTGDRQ13258 359 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 TCIRG1Q13488 830 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 RABL6Q3YEC7 729 aaPredicted RBP14.59□□□□□ -0.07
MSH6-210ENST00000540021 FOXP4Q8IVH2 680 aaPredicted RBP14.59□□□□□ -0.07
MSH6-210ENST00000540021 GPR108Q9NPR9 543 aa14.59□□□□□ -0.07
MSH6-210ENST00000540021 EPN1Q9Y6I3 576 aaPredicted RBP14.59□□□□□ -0.07
MSH6-210ENST00000540021 GOLGA6BA6NDN3 693 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 SPATA5Q8NB90 893 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 ATRIPQ8WXE1 791 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 RMND1Q9NWS8 449 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 FAM170AA1A519 330 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 NBPF26B4DH59 902 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 NBPF14Q5TI25 921 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 NBPF10Q6P3W6 841 aaKnown RBP14.58□□□□□ -0.08
MSH6-210ENST00000540021 NBPF15Q8N660 670 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 ANKRD13CQ8N6S4 541 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 STX8Q9UNK0 236 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 A0A0U1RQJ8 604 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 H3BQF6 201 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 CCT5P48643 541 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 E2F4Q16254 413 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 WHAMMP3Q1A5X7 153 aa14.58□□□□□ -0.08
MSH6-210ENST00000540021 PTPRUQ92729 1446 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 UTYO14607 1347 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 HSF2BPO75031 334 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 MFAP3LO75121 409 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 CCDC93Q567U6 631 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 EHBP1Q8NDI1 1231 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 RIN2Q8WYP3 895 aaPredicted RBP14.57□□□□□ -0.08
MSH6-210ENST00000540021 FUT8Q9BYC5 575 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 TFR2Q9UP52 801 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 TNKSO95271 1327 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 USP5P45974 858 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 CDR1P51861 262 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 COPB1P53618 953 aaKnown RBP14.57□□□□□ -0.08
MSH6-210ENST00000540021 SF3A3Q12874 501 aaKnown RBP eCLIP14.57□□□□□ -0.08
MSH6-210ENST00000540021 HEATR3Q7Z4Q2 680 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 MAGEB6P1A0A0J9YX57 407 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 FMNL1O95466 1100 aaPredicted RBP14.57□□□□□ -0.08
MSH6-210ENST00000540021 PTPREP23469 700 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 ERCC5P28715 1186 aaPredicted RBP14.57□□□□□ -0.08
MSH6-210ENST00000540021 KCNJ6P48051 423 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 CYP27A1Q02318 531 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 CSGALNACT2Q8N6G5 542 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 TRIML1Q8N9V2 468 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 OR8K1Q8NGG5 319 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 MKNK2Q9HBH9 465 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 EXOC1Q9NV70 894 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 TRIM10Q9UDY6 481 aa14.57□□□□□ -0.08
MSH6-210ENST00000540021 ANKARQ7Z5J8 1434 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 TACC1O75410 805 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 ATP1A2P50993 1020 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 FAM71BQ8TC56 605 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 ALS2CR12Q96Q35 445 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 PNKPQ96T60 521 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 TCP11L1Q9NUJ3 509 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 FXR1P51114 621 aaKnown RBP eCLIP14.56□□□□□ -0.082e-6■■■□□ 14.9
MSH6-210ENST00000540021 NDUFAB1O14561 156 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 BMP15O95972 392 aa14.56□□□□□ -0.08
MSH6-210ENST00000540021 BCAMP50895 628 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms