RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 GTF3C2Q8WUA4 911 aaPredicted RBP21.49■■□□□ 1.03
LTBR-206ENST00000536876 VCANP13611 3396 aa21.49■■□□□ 1.03
LTBR-206ENST00000536876 IGHA2P01877 340 aa21.48■■□□□ 1.03
LTBR-206ENST00000536876 MDM2Q00987 491 aaPredicted RBP21.48■■□□□ 1.03
LTBR-206ENST00000536876 MAP2K5Q13163 448 aa21.48■■□□□ 1.03
LTBR-206ENST00000536876 ZYXQ15942 572 aaKnown RBP21.48■■□□□ 1.03
LTBR-206ENST00000536876 NDUFB9Q9Y6M9 179 aa21.48■■□□□ 1.03
LTBR-206ENST00000536876 ACER1Q8TDN7 264 aa21.47■■□□□ 1.03
LTBR-206ENST00000536876 BTBD7Q9P203 1132 aa21.47■■□□□ 1.03
LTBR-206ENST00000536876 RABGAP1Q9Y3P9 1069 aa21.47■■□□□ 1.03
LTBR-206ENST00000536876 SPTBN5Q9NRC6 3674 aaKnown RBP21.47■■□□□ 1.03
LTBR-206ENST00000536876 HLA-DOAP06340 250 aa21.46■■□□□ 1.03
LTBR-206ENST00000536876 VCAM1P19320 739 aa21.46■■□□□ 1.03
LTBR-206ENST00000536876 CYP7A1P22680 504 aa21.46■■□□□ 1.03
LTBR-206ENST00000536876 CCDC158Q5M9N0 1113 aa21.46■■□□□ 1.03
LTBR-206ENST00000536876 MIGA1Q8NAN2 632 aa21.46■■□□□ 1.03
LTBR-206ENST00000536876 TRPV1Q8NER1 839 aa21.46■■□□□ 1.03
LTBR-206ENST00000536876 TRIM34Q9BYJ4 488 aa21.46■■□□□ 1.03
LTBR-206ENST00000536876 C1orf115Q9H7X2 142 aa21.46■■□□□ 1.03
LTBR-206ENST00000536876 GUCY1A2P33402 732 aa21.45■■□□□ 1.02
LTBR-206ENST00000536876 EVX2Q03828 476 aa21.45■■□□□ 1.02
LTBR-206ENST00000536876 LBX2Q6XYB7 198 aa21.45■■□□□ 1.02
LTBR-206ENST00000536876 CATSPERGQ6ZRH7 1159 aa21.45■■□□□ 1.02
LTBR-206ENST00000536876 NPLOC4Q8TAT6 608 aa21.45■■□□□ 1.02
LTBR-206ENST00000536876 FRAT1Q92837 279 aaPredicted RBP21.45■■□□□ 1.02
LTBR-206ENST00000536876 GUCD1Q96NT3 240 aa21.45■■□□□ 1.02
LTBR-206ENST00000536876 EHD4Q9H223 541 aa21.45■■□□□ 1.02
LTBR-206ENST00000536876 COL11A1P12107 1806 aaPredicted RBP21.45■■□□□ 1.02
LTBR-206ENST00000536876 PRUNE2Q8WUY3 3088 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 SPDYE16A6NNV3 312 aaPredicted RBP21.44■■□□□ 1.02
LTBR-206ENST00000536876 USP17L15C9J2P7 530 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 USP17L13C9JLJ4 530 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 USP17L11C9JVI0 530 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 USP17L18D6R9N7 530 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 USP17L22D6RA61 530 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 USP17L17D6RBQ6 530 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 USP17L19D6RCP7 530 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 USP17L20D6RJB6 530 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 IGSF3O75054 1194 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 HOXC6P09630 235 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 PTPREP23469 700 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 SHMT1P34896 483 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 USP17L24Q0WX57 530 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 GRB14Q14449 540 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 EAF2Q96CJ1 260 aaPredicted RBP21.44■■□□□ 1.02
LTBR-206ENST00000536876 KIAA1683Q9H0B3 1180 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 ANTXR1Q9H6X2 564 aa21.44■■□□□ 1.02
LTBR-206ENST00000536876 SLC15A5A6NIM6 579 aa21.43■■□□□ 1.02
LTBR-206ENST00000536876 IPO8O15397 1037 aaKnown RBP21.43■■□□□ 1.02
LTBR-206ENST00000536876 ATP8B2P98198 1209 aa21.43■■□□□ 1.02
LTBR-206ENST00000536876 EDC3Q96F86 508 aaKnown RBP21.43■■□□□ 1.02
LTBR-206ENST00000536876 FEZ1Q99689 392 aa21.43■■□□□ 1.02
LTBR-206ENST00000536876 CCDC8Q9H0W5 538 aaPredicted RBP21.43■■□□□ 1.02
LTBR-206ENST00000536876 DDX20Q9UHI6 824 aaKnown RBP21.43■■□□□ 1.02
LTBR-206ENST00000536876 SERPINB13Q9UIV8 391 aa21.43■■□□□ 1.02
LTBR-206ENST00000536876 NOP58Q9Y2X3 529 aaKnown RBP21.43■■□□□ 1.02
LTBR-206ENST00000536876 ZNFX1Q9P2E3 1918 aaKnown RBP21.43■■□□□ 1.02
LTBR-206ENST00000536876 SURF6O75683 361 aaKnown RBP21.42■■□□□ 1.02
LTBR-206ENST00000536876 CCAR1Q8IX12 1150 aaKnown RBP21.42■■□□□ 1.02
LTBR-206ENST00000536876 MAGEB6Q8N7X4 407 aa21.42■■□□□ 1.02
LTBR-206ENST00000536876 BAZ2AQ9UIF9 1905 aaKnown RBP21.42■■□□□ 1.02
LTBR-206ENST00000536876 POTEB2H3BUK9 544 aa21.41■■□□□ 1.02
LTBR-206ENST00000536876 IDH1O75874 414 aaKnown RBP21.41■■□□□ 1.02
LTBR-206ENST00000536876 CYBAP13498 195 aa21.41■■□□□ 1.02
LTBR-206ENST00000536876 CYP2C19P33261 490 aa21.41■■□□□ 1.02
LTBR-206ENST00000536876 PLCD1P51178 756 aa21.41■■□□□ 1.02
LTBR-206ENST00000536876 OS9Q13438 667 aaPredicted RBP21.41■■□□□ 1.02
LTBR-206ENST00000536876 RAB3GAP1Q15042 981 aa21.41■■□□□ 1.02
LTBR-206ENST00000536876 RIOK1Q9BRS2 568 aaKnown RBP21.41■■□□□ 1.02
LTBR-206ENST00000536876 SENP6Q9GZR1 1112 aaPredicted RBP21.41■■□□□ 1.02
LTBR-206ENST00000536876 PLXNA1Q9UIW2 1896 aa21.41■■□□□ 1.02
LTBR-206ENST00000536876 USP5P45974 858 aa21.4■■□□□ 1.02
LTBR-206ENST00000536876 CCNA1P78396 465 aa21.4■■□□□ 1.02
LTBR-206ENST00000536876 GABPAQ06546 454 aa21.4■■□□□ 1.02
LTBR-206ENST00000536876 ABCB5Q2M3G0 1257 aa21.4■■□□□ 1.02
LTBR-206ENST00000536876 MFSD14CQ5VZR4 134 aa21.4■■□□□ 1.02
LTBR-206ENST00000536876 LPAR1Q92633 364 aa21.4■■□□□ 1.02
LTBR-206ENST00000536876 RPAP3Q9H6T3 665 aaPredicted RBP21.4■■□□□ 1.02
LTBR-206ENST00000536876 ATN1P54259 1190 aaPredicted RBP21.39■■□□□ 1.01
LTBR-206ENST00000536876 USP14P54578 494 aa21.39■■□□□ 1.01
LTBR-206ENST00000536876 CERKLQ49MI3 558 aaPredicted RBP21.39■■□□□ 1.01
LTBR-206ENST00000536876 WDR78Q5VTH9 848 aa21.39■■□□□ 1.01
LTBR-206ENST00000536876 FAM109BQ6ICB4 259 aaPredicted RBP21.39■■□□□ 1.01
LTBR-206ENST00000536876 SMCHD1A6NHR9 2005 aa21.38■■□□□ 1.01
LTBR-206ENST00000536876 A0A1W2PRG0 241 aa21.38■■□□□ 1.01
LTBR-206ENST00000536876 DNM1LO00429 736 aa21.38■■□□□ 1.01
LTBR-206ENST00000536876 RLBP1P12271 317 aa21.38■■□□□ 1.01
LTBR-206ENST00000536876 RTP1P59025 263 aa21.38■■□□□ 1.01
LTBR-206ENST00000536876 KIAA1755Q5JYT7 1200 aa21.38■■□□□ 1.01
LTBR-206ENST00000536876 COL25A1Q9BXS0 654 aaPredicted RBP21.38■■□□□ 1.01
LTBR-206ENST00000536876 CWC22Q9HCG8 908 aaKnown RBP21.38■■□□□ 1.01
LTBR-206ENST00000536876 MYH7P12883 1935 aa21.37■■□□□ 1.01
LTBR-206ENST00000536876 GLRX3O76003 335 aaKnown RBP21.37■■□□□ 1.01
LTBR-206ENST00000536876 SEPT2Q15019 361 aa21.37■■□□□ 1.01
LTBR-206ENST00000536876 ZKSCAN2Q63HK3 967 aa21.37■■□□□ 1.01
LTBR-206ENST00000536876 MOV10L1Q9BXT6 1211 aaKnown RBP21.37■■□□□ 1.01
LTBR-206ENST00000536876 CERS3Q8IU89 383 aa21.36■■□□□ 1.01
LTBR-206ENST00000536876 MSCO60682 206 aa21.35■■□□□ 1.01
LTBR-206ENST00000536876 ADORA2AP29274 412 aa21.35■■□□□ 1.01
LTBR-206ENST00000536876 CNGA1P29973 690 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms