RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 IRX3P78415 501 aaPredicted RBP16.53■□□□□ 0.24
TMEM258-203ENST00000535297 SEPT2Q15019 361 aa16.53■□□□□ 0.24
TMEM258-203ENST00000535297 FAM110CQ1W6H9 321 aa16.53■□□□□ 0.24
TMEM258-203ENST00000535297 TMEM179Q6ZVK1 233 aa16.53■□□□□ 0.24
TMEM258-203ENST00000535297 OSBPL3Q9H4L5 887 aa16.53■□□□□ 0.24
TMEM258-203ENST00000535297 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
TMEM258-203ENST00000535297 CTGFP29279 349 aa16.52■□□□□ 0.24
TMEM258-203ENST00000535297 TDO2P48775 406 aa16.52■□□□□ 0.24
TMEM258-203ENST00000535297 FCGRTP55899 365 aa16.52■□□□□ 0.24
TMEM258-203ENST00000535297 PLEKHM2Q8IWE5 1019 aa16.52■□□□□ 0.24
TMEM258-203ENST00000535297 TRIM47Q96LD4 638 aa16.52■□□□□ 0.24
TMEM258-203ENST00000535297 SEC62Q99442 399 aaKnown RBP16.52■□□□□ 0.24
TMEM258-203ENST00000535297 EMILIN3Q9NT22 766 aa16.52■□□□□ 0.24
TMEM258-203ENST00000535297 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
TMEM258-203ENST00000535297 PATL2C9JE40 543 aaKnown RBP16.51■□□□□ 0.23
TMEM258-203ENST00000535297 SMIM22K7EJ46 135 aa16.51■□□□□ 0.23
TMEM258-203ENST00000535297 FMNL1O95466 1100 aaPredicted RBP16.51■□□□□ 0.23
TMEM258-203ENST00000535297 AKR1B1P15121 316 aa16.51■□□□□ 0.23
TMEM258-203ENST00000535297 HOXD10P28358 340 aa16.51■□□□□ 0.23
TMEM258-203ENST00000535297 ANKRD13CQ8N6S4 541 aa16.51■□□□□ 0.23
TMEM258-203ENST00000535297 ACER1Q8TDN7 264 aa16.51■□□□□ 0.23
TMEM258-203ENST00000535297 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
TMEM258-203ENST00000535297 PTCH2Q9Y6C5 1203 aa16.51■□□□□ 0.23
TMEM258-203ENST00000535297 APPP05067 770 aa16.5■□□□□ 0.23
TMEM258-203ENST00000535297 ZYXQ15942 572 aaKnown RBP16.5■□□□□ 0.23
TMEM258-203ENST00000535297 IFNL3Q8IZI9 196 aa16.5■□□□□ 0.23
TMEM258-203ENST00000535297 GTF3C2Q8WUA4 911 aaPredicted RBP16.5■□□□□ 0.23
TMEM258-203ENST00000535297 ARMC5Q96C12 935 aa16.5■□□□□ 0.23
TMEM258-203ENST00000535297 HELLSQ9NRZ9 838 aa16.5■□□□□ 0.23
TMEM258-203ENST00000535297 SRRDQ9UH36 339 aa16.5■□□□□ 0.23
TMEM258-203ENST00000535297 HTTP42858 3142 aa16.5■□□□□ 0.23
TMEM258-203ENST00000535297 MYPNQ86TC9 1320 aa16.49■□□□□ 0.23
TMEM258-203ENST00000535297 RBBP6Q7Z6E9 1792 aaKnown RBP16.49■□□□□ 0.23
TMEM258-203ENST00000535297 MINDY4BA8MYZ0 360 aa16.49■□□□□ 0.23
TMEM258-203ENST00000535297 TRIM6-TRIM34B2RNG4 842 aa16.49■□□□□ 0.23
TMEM258-203ENST00000535297 VCAM1P19320 739 aa16.49■□□□□ 0.23
TMEM258-203ENST00000535297 RGS19P49795 217 aa16.49■□□□□ 0.23
TMEM258-203ENST00000535297 HERVK_113P62684 666 aa16.49■□□□□ 0.23
TMEM258-203ENST00000535297 ICA1Q05084 483 aa16.49■□□□□ 0.23
TMEM258-203ENST00000535297 SH2D4AQ9H788 454 aa16.49■□□□□ 0.23
TMEM258-203ENST00000535297 ARHGEF10LQ9HCE6 1279 aa16.49■□□□□ 0.23
TMEM258-203ENST00000535297 MORF4L1Q9UBU8 362 aa16.49■□□□□ 0.23
TMEM258-203ENST00000535297 USP17L15C9J2P7 530 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 USP17L13C9JLJ4 530 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 USP17L11C9JVI0 530 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 USP17L18D6R9N7 530 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 USP17L22D6RA61 530 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 USP17L17D6RBQ6 530 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 USP17L19D6RCP7 530 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 USP17L20D6RJB6 530 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 ECM2O94769 699 aaPredicted RBP16.48■□□□□ 0.23
TMEM258-203ENST00000535297 SOX10P56693 466 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 USP17L24Q0WX57 530 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 SLC9C1Q4G0N8 1177 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 CCDC129Q6ZRS4 1044 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 P2RX7Q99572 595 aaKnown RBP16.48■□□□□ 0.23
TMEM258-203ENST00000535297 NAPBQ9H115 298 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 ZNF287Q9HBT7 754 aa16.48■□□□□ 0.23
TMEM258-203ENST00000535297 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
TMEM258-203ENST00000535297 TNPO2O14787 897 aaKnown RBP16.47■□□□□ 0.23
TMEM258-203ENST00000535297 RASA1P20936 1047 aa16.47■□□□□ 0.23
TMEM258-203ENST00000535297 CATSPERGQ6ZRH7 1159 aa16.47■□□□□ 0.23
TMEM258-203ENST00000535297 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
TMEM258-203ENST00000535297 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
TMEM258-203ENST00000535297 KANSL2Q9H9L4 492 aa16.47■□□□□ 0.23
TMEM258-203ENST00000535297 MKNK2Q9HBH9 465 aa16.47■□□□□ 0.23
TMEM258-203ENST00000535297 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
TMEM258-203ENST00000535297 A0A0D9SFI3 127 aa16.46■□□□□ 0.23
TMEM258-203ENST00000535297 SLC3A2P08195 630 aaKnown RBP16.46■□□□□ 0.23
TMEM258-203ENST00000535297 PRKCZQ05513 592 aa16.46■□□□□ 0.23
TMEM258-203ENST00000535297 MCMDC2Q4G0Z9 681 aa16.46■□□□□ 0.23
TMEM258-203ENST00000535297 CLEC10AQ8IUN9 316 aa16.46■□□□□ 0.23
TMEM258-203ENST00000535297 RAET1EQ8TD07 263 aa16.46■□□□□ 0.23
TMEM258-203ENST00000535297 LPAR1Q92633 364 aa16.46■□□□□ 0.23
TMEM258-203ENST00000535297 ZNF333Q96JL9 665 aa16.46■□□□□ 0.23
TMEM258-203ENST00000535297 FAM227BQ96M60 508 aa16.46■□□□□ 0.23
TMEM258-203ENST00000535297 FOXP2O15409 715 aa16.45■□□□□ 0.22
TMEM258-203ENST00000535297 PPARAQ07869 468 aa16.45■□□□□ 0.22
TMEM258-203ENST00000535297 NMIQ13287 307 aaPredicted RBP16.45■□□□□ 0.22
TMEM258-203ENST00000535297 LBX2Q6XYB7 198 aa16.45■□□□□ 0.22
TMEM258-203ENST00000535297 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
TMEM258-203ENST00000535297 GPRC5AQ8NFJ5 357 aa16.45■□□□□ 0.22
TMEM258-203ENST00000535297 COA7Q96BR5 231 aa16.45■□□□□ 0.22
TMEM258-203ENST00000535297 RPAP3Q9H6T3 665 aaPredicted RBP16.45■□□□□ 0.22
TMEM258-203ENST00000535297 VCPKMTQ9H867 229 aa16.45■□□□□ 0.22
TMEM258-203ENST00000535297 DOCK3Q8IZD9 2030 aa16.45■□□□□ 0.22
TMEM258-203ENST00000535297 A0A0G2JMZ2 1700 aa16.45■□□□□ 0.22
TMEM258-203ENST00000535297 PLIN4Q96Q06 1357 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 KIAA0100Q14667 2235 aaKnown RBP16.44■□□□□ 0.22
TMEM258-203ENST00000535297 EEF2P13639 858 aaKnown RBP16.44■□□□□ 0.22
TMEM258-203ENST00000535297 PDE4AP27815 886 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 ERVK-9P63128 1117 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 ERVK-24P63145 666 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 PDE4BQ07343 736 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 IRF5Q13568 498 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 ALX1Q15699 326 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 VPS53Q5VIR6 699 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
TMEM258-203ENST00000535297 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.44■□□□□ 0.22
TMEM258-203ENST00000535297 TXNRD2Q9NNW7 524 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms