RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 DDX60LQ5H9U9 1706 aaKnown RBP18.32■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L15C9J2P7 530 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L13C9JLJ4 530 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L11C9JVI0 530 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L18D6R9N7 530 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L22D6RA61 530 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L17D6RBQ6 530 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L19D6RCP7 530 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L20D6RJB6 530 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 MPHOSPH10O00566 681 aaKnown RBP18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L24Q0WX57 530 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 SLC44A5Q8NCS7 719 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 DYNLL2Q96FJ2 89 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 DEFB118Q96PH6 123 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 DCTPP1Q9H773 170 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 NAV1Q8NEY1 1877 aa18.31■□□□□ 0.52
EXOSC4-203ENST00000527954 TFRCP02786 760 aaKnown RBP18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 VCAM1P19320 739 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 CYP2B6P20813 491 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 ERVK-9P63128 1117 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 ERVK-24P63145 666 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 TRIM32Q13049 653 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 UBE3CQ15386 1083 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 CATSPERGQ6ZRH7 1159 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 UBE2Q1Q7Z7E8 422 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 CCAR1Q8IX12 1150 aaKnown RBP18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 GTF3C2Q8WUA4 911 aaPredicted RBP18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 DPF3Q92784 378 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 PORCNQ9H237 461 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 ATP8A2Q9NTI2 1148 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 ECHDC1Q9NTX5 307 aa18.3■□□□□ 0.52
EXOSC4-203ENST00000527954 FARP2O94887 1054 aaPredicted RBP18.29■□□□□ 0.52
EXOSC4-203ENST00000527954 HMGCRP04035 888 aa18.29■□□□□ 0.52
EXOSC4-203ENST00000527954 MAPK4P31152 587 aa18.29■□□□□ 0.52
EXOSC4-203ENST00000527954 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.522e-7■■■■□ 23.4
EXOSC4-203ENST00000527954 PAK6Q9NQU5 681 aaPredicted RBP18.29■□□□□ 0.52
EXOSC4-203ENST00000527954 CYP2D7A0A087X1C5 515 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 A0A1W2PRG0 241 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 H0YGN5 161 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 SMIM22K7EJ46 135 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 CNMDO75829 334 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 HABP4Q5JVS0 413 aaKnown RBP18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 ZSCAN25Q6NSZ9 544 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 GPR142Q7Z601 462 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 TRIB2Q92519 343 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 RPAP3Q9H6T3 665 aaPredicted RBP18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 SWAP70Q9UH65 585 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 RABGAP1Q9Y3P9 1069 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 SLC4A4Q9Y6R1 1079 aa18.28■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L12C9JPN9 530 aa18.27■□□□□ 0.52
EXOSC4-203ENST00000527954 USP17L21D6R901 530 aa18.27■□□□□ 0.52
EXOSC4-203ENST00000527954 C12orf60Q5U649 245 aa18.27■□□□□ 0.52
EXOSC4-203ENST00000527954 TSHZ3Q63HK5 1081 aa18.27■□□□□ 0.52
EXOSC4-203ENST00000527954 PLEKHH3Q7Z736 793 aa18.27■□□□□ 0.52
EXOSC4-203ENST00000527954 HTATIP2Q9BUP3 242 aa18.27■□□□□ 0.52
EXOSC4-203ENST00000527954 AKR1B1P15121 316 aa18.26■□□□□ 0.51
EXOSC4-203ENST00000527954 TMEM179Q6ZVK1 233 aa18.26■□□□□ 0.51
EXOSC4-203ENST00000527954 SOCS4Q8WXH5 440 aa18.26■□□□□ 0.51
EXOSC4-203ENST00000527954 DDRGK1Q96HY6 314 aa18.26■□□□□ 0.51
EXOSC4-203ENST00000527954 CRISPLD2Q9H0B8 497 aa18.26■□□□□ 0.51
EXOSC4-203ENST00000527954 CWC22Q9HCG8 908 aaKnown RBP18.26■□□□□ 0.51
EXOSC4-203ENST00000527954 HMX1Q9NP08 348 aaPredicted RBP18.26■□□□□ 0.51
EXOSC4-203ENST00000527954 BTBD7Q9P203 1132 aa18.26■□□□□ 0.51
EXOSC4-203ENST00000527954 PCDHB15Q9Y5E8 787 aa18.26■□□□□ 0.51
EXOSC4-203ENST00000527954 DOCK3Q8IZD9 2030 aa18.26■□□□□ 0.51
EXOSC4-203ENST00000527954 RPTORQ8N122 1335 aa18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 SPDYE16A6NNV3 312 aaPredicted RBP18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 XRCC5P13010 732 aaKnown RBP18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 CDK8P49336 464 aa18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 MORN1Q5T089 497 aa18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 CLEC10AQ8IUN9 316 aa18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 AMOTL1Q8IY63 956 aa18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 USP6NLQ92738 828 aa18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 GPATCH3Q96I76 525 aa18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 COLQQ9Y215 455 aaPredicted RBP18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 PLXNB2O15031 1838 aa18.25■□□□□ 0.51
EXOSC4-203ENST00000527954 CAPN2P17655 700 aa18.24■□□□□ 0.51
EXOSC4-203ENST00000527954 RGS2P41220 211 aa18.24■□□□□ 0.51
EXOSC4-203ENST00000527954 CCNA1P78396 465 aa18.24■□□□□ 0.51
EXOSC4-203ENST00000527954 CCL14Q16627 93 aa18.24■□□□□ 0.51
EXOSC4-203ENST00000527954 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
EXOSC4-203ENST00000527954 WDR78Q5VTH9 848 aa18.24■□□□□ 0.51
EXOSC4-203ENST00000527954 CTR9Q6PD62 1173 aa18.24■□□□□ 0.51
EXOSC4-203ENST00000527954 LBX2Q6XYB7 198 aa18.24■□□□□ 0.51
EXOSC4-203ENST00000527954 SIAH1Q8IUQ4 282 aa18.24■□□□□ 0.51
EXOSC4-203ENST00000527954 KBTBD3Q8NAB2 608 aa18.24■□□□□ 0.51
EXOSC4-203ENST00000527954 PRKAR2AP13861 404 aaKnown RBP18.23■□□□□ 0.51
EXOSC4-203ENST00000527954 ZKSCAN1P17029 563 aaPredicted RBP18.23■□□□□ 0.51
EXOSC4-203ENST00000527954 ICA1Q05084 483 aa18.23■□□□□ 0.51
EXOSC4-203ENST00000527954 COG2Q14746 738 aa18.23■□□□□ 0.51
EXOSC4-203ENST00000527954 C16orf86Q6ZW13 317 aa18.23■□□□□ 0.51
EXOSC4-203ENST00000527954 PAWRQ96IZ0 340 aaKnown RBP18.23■□□□□ 0.51
EXOSC4-203ENST00000527954 CCDC17Q96LX7 622 aa18.23■□□□□ 0.51
EXOSC4-203ENST00000527954 STRBPQ96SI9 672 aaKnown RBP18.23■□□□□ 0.51
EXOSC4-203ENST00000527954 TANGO6Q9C0B7 1094 aa18.23■□□□□ 0.51
EXOSC4-203ENST00000527954 ARHGEF10LQ9HCE6 1279 aa18.23■□□□□ 0.51
EXOSC4-203ENST00000527954 GLRX3O76003 335 aaKnown RBP18.22■□□□□ 0.51
EXOSC4-203ENST00000527954 RRP1P56182 461 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms