RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 USP17L5A8MUK1 530 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 PDHXO00330 501 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 GPAA1O43292 621 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 GH2P01242 217 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 POLR3DP05423 398 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 CYP2C8P10632 490 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 TAF1CQ15572 869 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 IFFO2Q5TF58 517 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 ZSCAN25Q6NSZ9 544 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 CCDC129Q6ZRS4 1044 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 TTC6Q86TZ1 520 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 SKAP1Q86WV1 359 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 SIAH1Q8IUQ4 282 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 ZNF280CQ8ND82 737 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 FSD1Q9BTV5 496 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 OSBPL3Q9H4L5 887 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 ATP8A2Q9NTI2 1148 aa10.67□□□□□ -0.7
CCDC90B-208ENST00000527025 FKTNO75072 461 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 HLA-DOAP06340 250 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 VPS53Q5VIR6 699 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 OTUD7BQ6GQQ9 843 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 POTEEQ6S8J3 1075 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 C17orf99Q6UX52 265 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 CLEC10AQ8IUN9 316 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 ACER1Q8TDN7 264 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 EVI5LQ96CN4 794 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 FAM227BQ96M60 508 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 WDR18Q9BV38 432 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 ARHGAP39Q9C0H5 1083 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 TACC3Q9Y6A5 838 aa10.66□□□□□ -0.7
CCDC90B-208ENST00000527025 MYH8P13535 1937 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 A0A0D9SFI3 127 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 A0A1W2PRG0 241 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 TLR2O60603 784 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 PEX10O60683 326 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 ZFYP08048 801 aaPredicted RBP10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 ASNSP08243 561 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 HMGCS2P54868 508 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 MTMR2Q13614 643 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 SEPT2Q15019 361 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 CERKLQ49MI3 558 aaPredicted RBP10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 SH3D19Q5HYK7 790 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 GADL1Q6ZQY3 521 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 CD99L2Q8TCZ2 262 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 ABHD8Q96I13 439 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 ZFYVE28Q9HCC9 887 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 EMILIN3Q9NT22 766 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 CPA4Q9UI42 421 aa10.65□□□□□ -0.7
CCDC90B-208ENST00000527025 PATL2C9JE40 543 aaKnown RBP10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 AKR1B1P15121 316 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 CDK8P49336 464 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 PSEN1P49768 467 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 BACE1P56817 501 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 SP3Q02447 781 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 ABCB5Q2M3G0 1257 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 SBK1Q52WX2 424 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 KIAA1755Q5JYT7 1200 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 CTU1Q7Z7A3 348 aaKnown RBP10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 IFNL3Q8IZI9 196 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 STK11IPQ8N1F8 1099 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 MARVELD3Q96A59 401 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 TMEM121BQ9BXQ6 578 aaPredicted RBP10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 ZCCHC17Q9NP64 241 aaKnown RBP10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 INCENPQ9NQS7 918 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 BRCA2P51587 3418 aa10.64□□□□□ -0.71
CCDC90B-208ENST00000527025 GREB1LQ9C091 1923 aaPredicted RBP10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 MINDY4BA8MYZ0 360 aa10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 BCRP11274 1271 aa10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 GSPT1P15170 499 aaKnown RBP10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 NMIQ13287 307 aaPredicted RBP10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 RAB3GAP1Q15042 981 aa10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 C16orf86Q6ZW13 317 aa10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 CENPQQ7L2Z9 268 aaPredicted RBP10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 FASTKD5Q7L8L6 764 aaKnown RBP10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 OTOP1Q7RTM1 612 aa10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 ZNF589Q86UQ0 364 aaPredicted RBP10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 NKX2-3Q8TAU0 364 aa10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 TRIM34Q9BYJ4 488 aa10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 IL25Q9H293 177 aa10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 PPP4R2Q9NY27 417 aa10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 AGTPBP1Q9UPW5 1226 aa10.63□□□□□ -0.71
CCDC90B-208ENST00000527025 MGAMO43451 1857 aa10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 TRIM6-TRIM34B2RNG4 842 aa10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 SDSP20132 328 aa10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 GIMAP6Q6P9H5 292 aa10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 PROCA1Q8NCQ7 364 aaPredicted RBP10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 RILPL2Q969X0 211 aa10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 CCDC136Q96JN2 1154 aa10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 GINM1Q9NU53 330 aa10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 SLC45A1Q9Y2W3 748 aa10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 RLFQ13129 1914 aa10.62□□□□□ -0.71
CCDC90B-208ENST00000527025 MPHOSPH10O00566 681 aaKnown RBP10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 SNPHO15079 494 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 PRDM1O75626 825 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 APPP05067 770 aa10.61□□□□□ -0.71
CCDC90B-208ENST00000527025 RASA1P20936 1047 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms