RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 RAXQ9Y2V3 346 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 CCDC85CA6NKD9 419 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 KLF4O43474 513 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 DNAJA2O60884 412 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 CLEC3AO75596 197 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 GDF11O95390 407 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 NCAPHQ15003 741 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 GNPTABQ3T906 1256 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 LETMD1Q6P1Q0 360 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 UBE3DQ7Z6J8 389 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 TMEM151AQ8N4L1 468 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 BAHD1Q8TBE0 780 aaPredicted RBP5.87□□□□□ -1.47
SKP1-212ENST00000523966 SLC9A7Q96T83 725 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 FAM83CQ9BQN1 747 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 CEP131Q9UPN4 1083 aa5.87□□□□□ -1.47
SKP1-212ENST00000523966 K7ELQ4 463 aaPredicted RBP5.86□□□□□ -1.47
SKP1-212ENST00000523966 POLR2BP30876 1174 aaKnown RBP5.86□□□□□ -1.47
SKP1-212ENST00000523966 RNF4P78317 190 aa5.86□□□□□ -1.47
SKP1-212ENST00000523966 SLC7A5Q01650 507 aa5.86□□□□□ -1.47
SKP1-212ENST00000523966 IFRD2Q12894 506 aaPredicted RBP5.86□□□□□ -1.47
SKP1-212ENST00000523966 CDK5R2Q13319 367 aa5.86□□□□□ -1.47
SKP1-212ENST00000523966 BMS1Q14692 1282 aaKnown RBP5.86□□□□□ -1.47
SKP1-212ENST00000523966 VHLLQ6RSH7 139 aa5.86□□□□□ -1.47
SKP1-212ENST00000523966 NOP9Q86U38 636 aaKnown RBP5.86□□□□□ -1.47
SKP1-212ENST00000523966 TOP6BLQ8N6T0 577 aa5.86□□□□□ -1.47
SKP1-212ENST00000523966 MKL1Q969V6 931 aa5.86□□□□□ -1.47
SKP1-212ENST00000523966 TBC1D32Q96NH3 1257 aa5.86□□□□□ -1.47
SKP1-212ENST00000523966 TNKS2Q9H2K2 1166 aa5.86□□□□□ -1.47
SKP1-212ENST00000523966 NAT2P11245 290 aa5.85□□□□□ -1.47
SKP1-212ENST00000523966 CYP27A1Q02318 531 aa5.85□□□□□ -1.47
SKP1-212ENST00000523966 DDR2Q16832 855 aa5.85□□□□□ -1.47
SKP1-212ENST00000523966 CYP27C1Q4G0S4 372 aa5.85□□□□□ -1.47
SKP1-212ENST00000523966 DUSP27Q5VZP5 1158 aa5.85□□□□□ -1.47
SKP1-212ENST00000523966 ARHGAP27Q6ZUM4 889 aa5.85□□□□□ -1.47
SKP1-212ENST00000523966 CDH24Q86UP0 819 aa5.85□□□□□ -1.47
SKP1-212ENST00000523966 FAM178BQ8IXR5 827 aa5.85□□□□□ -1.47
SKP1-212ENST00000523966 SLC6A18Q96N87 628 aa5.85□□□□□ -1.47
SKP1-212ENST00000523966 MKRN2Q9H000 416 aaKnown RBP5.85□□□□□ -1.47
SKP1-212ENST00000523966 GTF2IRD1Q9UHL9 959 aa5.85□□□□□ -1.47
SKP1-212ENST00000523966 HMX2A2RU54 273 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 DYNC1LI2O43237 492 aaPredicted RBP5.84□□□□□ -1.47
SKP1-212ENST00000523966 ACRP10323 421 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 PMS1P54277 932 aaKnown RBP5.84□□□□□ -1.47
SKP1-212ENST00000523966 ZYXQ15942 572 aaKnown RBP5.84□□□□□ -1.47
SKP1-212ENST00000523966 KIAA1211LQ6NV74 962 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 C6orf15Q6UXA7 325 aaPredicted RBP5.84□□□□□ -1.47
SKP1-212ENST00000523966 LRP10Q7Z4F1 713 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 CCDC144CPQ8IYA2 1237 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 FBXL6Q8N531 539 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 SMARCC1Q92922 1105 aaPredicted RBP5.84□□□□□ -1.47
SKP1-212ENST00000523966 DEPDC7Q96QD5 511 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 SSBP4Q9BWG4 385 aaPredicted RBP5.84□□□□□ -1.47
SKP1-212ENST00000523966 CCDC113Q9H0I3 377 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 C7orf69Q9H7B7 122 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 CWC22Q9HCG8 908 aaKnown RBP5.84□□□□□ -1.47
SKP1-212ENST00000523966 ATG3Q9NT62 314 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 SUCOQ9UBS9 1254 aaKnown RBP5.84□□□□□ -1.47
SKP1-212ENST00000523966 ZNF214Q9UL59 606 aaPredicted RBP5.84□□□□□ -1.47
SKP1-212ENST00000523966 CDK11AQ9UQ88 783 aaPredicted RBP5.84□□□□□ -1.47
SKP1-212ENST00000523966 MAPK8IP1Q9UQF2 711 aa5.84□□□□□ -1.47
SKP1-212ENST00000523966 GSC2O15499 205 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 SLITRK5O94991 958 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 TP53P04637 393 aaPredicted RBP5.83□□□□□ -1.48
SKP1-212ENST00000523966 FAM87AP0C7U9 286 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 TCEAL1Q15170 157 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 PLA2G4EQ3MJ16 856 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 OGFOD3Q6PK18 319 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 PRR23CQ6ZRP0 262 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 EEPD1Q7L9B9 569 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 CELF2-AS1Q8N7Q2 184 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 COX4I2Q96KJ9 171 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 ASCC2Q9H1I8 757 aaPredicted RBP5.83□□□□□ -1.48
SKP1-212ENST00000523966 PRDM5Q9NQX1 630 aaPredicted RBP5.83□□□□□ -1.48
SKP1-212ENST00000523966 C1GALT1Q9NS00 363 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 KCNH3Q9ULD8 1083 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 PCDHB10Q9UN67 800 aa5.83□□□□□ -1.48
SKP1-212ENST00000523966 TMA7Q9Y2S6 64 aaKnown RBP5.83□□□□□ -1.48
SKP1-212ENST00000523966 LTBP3Q9NS15 1303 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 AGRPO00253 132 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 PDPK1O15530 556 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 UBOX5O94941 541 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 GJB6O95452 261 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 SERINC3Q13530 473 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 SFRP5Q5T4F7 317 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 RNF43Q68DV7 783 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 HEATR6Q6AI08 1181 aaKnown RBP5.82□□□□□ -1.48
SKP1-212ENST00000523966 SEZ6L2Q6UXD5 910 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 ADAT2Q7Z6V5 191 aaKnown RBP5.82□□□□□ -1.48
SKP1-212ENST00000523966 ZAR1Q86SH2 424 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 TMEM192Q8IY95 271 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 RNF141Q8WVD5 230 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 MFSD14AQ96MC6 490 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 KREMEN1Q96MU8 473 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 APBA2Q99767 749 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 DUSP23Q9BVJ7 150 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 ASPNQ9BXN1 380 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 GBP3Q9H0R5 595 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 FAM86C1Q9NVL1 165 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 FBXL21Q9UKT6 434 aa5.82□□□□□ -1.48
SKP1-212ENST00000523966 GNAT3A8MTJ3 354 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms