RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 CCAR1Q8IX12 1150 aaKnown RBP30.55■■■□□ 2.48
VEGFA-220ENST00000519767 ECHDC1Q9NTX5 307 aa30.55■■■□□ 2.48
VEGFA-220ENST00000519767 SWAP70Q9UH65 585 aa30.55■■■□□ 2.48
VEGFA-220ENST00000519767 SMARCA5O60264 1052 aaPredicted RBP30.54■■■□□ 2.48
VEGFA-220ENST00000519767 MBD4O95243 580 aa30.54■■■□□ 2.48
VEGFA-220ENST00000519767 TXNRD2Q9NNW7 524 aa30.54■■■□□ 2.48
VEGFA-220ENST00000519767 CATSPERGQ6ZRH7 1159 aa30.53■■■□□ 2.48
VEGFA-220ENST00000519767 AMOTL1Q8IY63 956 aa30.53■■■□□ 2.48
VEGFA-220ENST00000519767 ACER1Q8TDN7 264 aa30.53■■■□□ 2.48
VEGFA-220ENST00000519767 DDRGK1Q96HY6 314 aa30.53■■■□□ 2.48
VEGFA-220ENST00000519767 GPATCH3Q96I76 525 aa30.53■■■□□ 2.48
VEGFA-220ENST00000519767 RABGAP1Q9Y3P9 1069 aa30.53■■■□□ 2.48
VEGFA-220ENST00000519767 CEP290O15078 2479 aa30.52■■■□□ 2.48
VEGFA-220ENST00000519767 HMGCRP04035 888 aa30.52■■■□□ 2.48
VEGFA-220ENST00000519767 GUCY1A2P33402 732 aa30.52■■■□□ 2.48
VEGFA-220ENST00000519767 ERVK-9P63128 1117 aa30.52■■■□□ 2.48
VEGFA-220ENST00000519767 ERVK-24P63145 666 aa30.52■■■□□ 2.48
VEGFA-220ENST00000519767 ZYXQ15942 572 aaKnown RBP30.52■■■□□ 2.48
VEGFA-220ENST00000519767 UBE2Q1Q7Z7E8 422 aa30.52■■■□□ 2.48
VEGFA-220ENST00000519767 NUDT12Q9BQG2 462 aa30.52■■■□□ 2.48
VEGFA-220ENST00000519767 PAK6Q9NQU5 681 aaPredicted RBP30.52■■■□□ 2.48
VEGFA-220ENST00000519767 MPHOSPH10O00566 681 aaKnown RBP30.51■■■□□ 2.47
VEGFA-220ENST00000519767 TFRCP02786 760 aaKnown RBP30.51■■■□□ 2.47
VEGFA-220ENST00000519767 SEPT2Q15019 361 aa30.51■■■□□ 2.47
VEGFA-220ENST00000519767 Q3C1V9 767 aa30.51■■■□□ 2.47
VEGFA-220ENST00000519767 SOCS4Q8WXH5 440 aa30.51■■■□□ 2.47
VEGFA-220ENST00000519767 PRKAB2O43741 272 aa30.5■■■□□ 2.47
VEGFA-220ENST00000519767 XRCC5P13010 732 aaKnown RBP30.5■■■□□ 2.47
VEGFA-220ENST00000519767 CCNA1P78396 465 aa30.5■■■□□ 2.47
VEGFA-220ENST00000519767 TRMT44Q8IYL2 757 aaKnown RBP30.5■■■□□ 2.47
VEGFA-220ENST00000519767 DEFB118Q96PH6 123 aa30.5■■■□□ 2.47
VEGFA-220ENST00000519767 HTATIP2Q9BUP3 242 aa30.5■■■□□ 2.47
VEGFA-220ENST00000519767 DOCK3Q8IZD9 2030 aa30.49■■■□□ 2.47
VEGFA-220ENST00000519767 VCAM1P19320 739 aa30.49■■■□□ 2.47
VEGFA-220ENST00000519767 TMEM179Q6ZVK1 233 aa30.49■■■□□ 2.47
VEGFA-220ENST00000519767 DPF3Q92784 378 aa30.49■■■□□ 2.47
VEGFA-220ENST00000519767 PAGR1Q9BTK6 254 aa30.49■■■□□ 2.47
VEGFA-220ENST00000519767 CYP2D6P10635 497 aa30.48■■■□□ 2.47
VEGFA-220ENST00000519767 SLFNL1Q499Z3 407 aa30.48■■■□□ 2.47
VEGFA-220ENST00000519767 C12orf60Q5U649 245 aa30.48■■■□□ 2.47
VEGFA-220ENST00000519767 LBX2Q6XYB7 198 aa30.48■■■□□ 2.47
VEGFA-220ENST00000519767 CCDC17Q96LX7 622 aa30.48■■■□□ 2.47
VEGFA-220ENST00000519767 PEX10O60683 326 aa30.47■■■□□ 2.47
VEGFA-220ENST00000519767 GLRX3O76003 335 aaKnown RBP30.47■■■□□ 2.47
VEGFA-220ENST00000519767 FARP2O94887 1054 aaPredicted RBP30.47■■■□□ 2.47
VEGFA-220ENST00000519767 PLEKHH3Q7Z736 793 aa30.47■■■□□ 2.47
VEGFA-220ENST00000519767 CRISPLD2Q9H0B8 497 aa30.47■■■□□ 2.47
VEGFA-220ENST00000519767 HMX1Q9NP08 348 aaPredicted RBP30.47■■■□□ 2.47
VEGFA-220ENST00000519767 SLC4A4Q9Y6R1 1079 aa30.47■■■□□ 2.47
VEGFA-220ENST00000519767 RPTORQ8N122 1335 aa30.47■■■□□ 2.47
VEGFA-220ENST00000519767 USP17L12C9JPN9 530 aa30.46■■■□□ 2.47
VEGFA-220ENST00000519767 USP17L21D6R901 530 aa30.46■■■□□ 2.47
VEGFA-220ENST00000519767 CYP2B6P20813 491 aa30.46■■■□□ 2.47
VEGFA-220ENST00000519767 POTEEQ6S8J3 1075 aa30.46■■■□□ 2.47
VEGFA-220ENST00000519767 DYNLL2Q96FJ2 89 aa30.46■■■□□ 2.47
VEGFA-220ENST00000519767 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.46■■■□□ 2.473e-7■■■■□ 25.4
VEGFA-220ENST00000519767 HOXC10Q9NYD6 342 aa30.46■■■□□ 2.47
VEGFA-220ENST00000519767 EVX2Q03828 476 aa30.45■■■□□ 2.47
VEGFA-220ENST00000519767 GPR142Q7Z601 462 aa30.45■■■□□ 2.47
VEGFA-220ENST00000519767 PUS7LQ9H0K6 701 aaKnown RBP30.45■■■□□ 2.47
VEGFA-220ENST00000519767 PORCNQ9H237 461 aa30.45■■■□□ 2.47
VEGFA-220ENST00000519767 RPAP3Q9H6T3 665 aaPredicted RBP30.45■■■□□ 2.47
VEGFA-220ENST00000519767 CWC22Q9HCG8 908 aaKnown RBP30.45■■■□□ 2.47
VEGFA-220ENST00000519767 HABP4Q5JVS0 413 aaKnown RBP30.44■■■□□ 2.46
VEGFA-220ENST00000519767 KBTBD3Q8NAB2 608 aa30.44■■■□□ 2.46
VEGFA-220ENST00000519767 SLC44A5Q8NCS7 719 aa30.44■■■□□ 2.46
VEGFA-220ENST00000519767 USP6NLQ92738 828 aa30.44■■■□□ 2.46
VEGFA-220ENST00000519767 SH2D4AQ9H788 454 aa30.44■■■□□ 2.46
VEGFA-220ENST00000519767 A0A1W2PRG0 241 aa30.43■■■□□ 2.46
VEGFA-220ENST00000519767 H0YGN5 161 aa30.43■■■□□ 2.46
VEGFA-220ENST00000519767 RGS2P41220 211 aa30.43■■■□□ 2.46
VEGFA-220ENST00000519767 CDK8P49336 464 aa30.43■■■□□ 2.46
VEGFA-220ENST00000519767 COG2Q14746 738 aa30.43■■■□□ 2.46
VEGFA-220ENST00000519767 MORN1Q5T089 497 aa30.43■■■□□ 2.46
VEGFA-220ENST00000519767 DDX60LQ5H9U9 1706 aaKnown RBP30.42■■■□□ 2.46
VEGFA-220ENST00000519767 CNMDO75829 334 aa30.42■■■□□ 2.46
VEGFA-220ENST00000519767 CHGBP05060 677 aa30.42■■■□□ 2.46
VEGFA-220ENST00000519767 C16orf86Q6ZW13 317 aa30.42■■■□□ 2.46
VEGFA-220ENST00000519767 TRIB2Q92519 343 aa30.42■■■□□ 2.46
VEGFA-220ENST00000519767 LPAR1Q92633 364 aa30.42■■■□□ 2.46
VEGFA-220ENST00000519767 STRBPQ96SI9 672 aaKnown RBP30.42■■■□□ 2.46
VEGFA-220ENST00000519767 ARHGEF10LQ9HCE6 1279 aa30.42■■■□□ 2.46
VEGFA-220ENST00000519767 NR2E3Q9Y5X4 410 aa30.42■■■□□ 2.46
VEGFA-220ENST00000519767 ZFYP08048 801 aaPredicted RBP30.41■■■□□ 2.46
VEGFA-220ENST00000519767 LRRFIP1Q32MZ4 808 aaKnown RBP30.41■■■□□ 2.46
VEGFA-220ENST00000519767 CTR9Q6PD62 1173 aa30.41■■■□□ 2.46
VEGFA-220ENST00000519767 ANKLE1Q8NAG6 615 aa30.41■■■□□ 2.46
VEGFA-220ENST00000519767 PCDHB15Q9Y5E8 787 aa30.41■■■□□ 2.46
VEGFA-220ENST00000519767 NAV1Q8NEY1 1877 aa30.4■■■□□ 2.46
VEGFA-220ENST00000519767 SPDYE16A6NNV3 312 aaPredicted RBP30.4■■■□□ 2.46
VEGFA-220ENST00000519767 AKR1B1P15121 316 aa30.4■■■□□ 2.46
VEGFA-220ENST00000519767 MAP3K21Q5TCX8 1036 aa30.4■■■□□ 2.46
VEGFA-220ENST00000519767 GIMAP6Q6P9H5 292 aa30.4■■■□□ 2.46
VEGFA-220ENST00000519767 TMX2Q9Y320 296 aa30.4■■■□□ 2.46
VEGFA-220ENST00000519767 RNF113AO15541 343 aaKnown RBP30.39■■■□□ 2.46
VEGFA-220ENST00000519767 ZKSCAN1P17029 563 aaPredicted RBP30.39■■■□□ 2.46
VEGFA-220ENST00000519767 TRIM32Q13049 653 aa30.39■■■□□ 2.46
VEGFA-220ENST00000519767 SIAH1Q8IUQ4 282 aa30.39■■■□□ 2.46
VEGFA-220ENST00000519767 ARPP21Q9UBL0 812 aaPredicted RBP30.39■■■□□ 2.46
VEGFA-220ENST00000519767 CYP2D7A0A087X1C5 515 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms