RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 DCTN1Q14203 1278 aa3.41□□□□□ -1.86
EFR3A-202ENST00000519656 TWISTNBQ3B726 338 aaPredicted RBP3.41□□□□□ -1.86
EFR3A-202ENST00000519656 OLFM4Q6UX06 510 aa3.41□□□□□ -1.86
EFR3A-202ENST00000519656 CLUAP1Q96AJ1 413 aa3.41□□□□□ -1.86
EFR3A-202ENST00000519656 IFT57Q9NWB7 429 aa3.41□□□□□ -1.86
EFR3A-202ENST00000519656 USP2O75604 605 aaPredicted RBP3.4□□□□□ -1.86
EFR3A-202ENST00000519656 ANXA1P04083 346 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 ADCYAP1R1P41586 468 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 NOP2P46087 812 aaKnown RBP3.4□□□□□ -1.86
EFR3A-202ENST00000519656 RGS3P49796 1198 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 HMGCS2P54868 508 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 CPLX2Q6PUV4 134 aaKnown RBP3.4□□□□□ -1.86
EFR3A-202ENST00000519656 C17orf99Q6UX52 265 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 FTSJ3Q8IY81 847 aaKnown RBP3.4□□□□□ -1.86
EFR3A-202ENST00000519656 SEPT8Q92599 483 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 FERMT2Q96AC1 680 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 PBXIP1Q96AQ6 731 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 PRMT6Q96LA8 375 aaPredicted RBP3.4□□□□□ -1.86
EFR3A-202ENST00000519656 TESK2Q96S53 571 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 MMP19Q99542 508 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 GDF15Q99988 308 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 MRPS17Q9Y2R5 130 aaKnown RBP3.4□□□□□ -1.86
EFR3A-202ENST00000519656 MUC6Q6W4X9 2439 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 NRXN3Q9Y4C0 1643 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 TESPA1A2RU30 521 aaPredicted RBP3.4□□□□□ -1.86
EFR3A-202ENST00000519656 ENO4A6NNW6 628 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 ATP2A2P16615 1042 aaKnown RBP3.4□□□□□ -1.86
EFR3A-202ENST00000519656 VPS53Q5VIR6 699 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 RAB11FIP4Q86YS3 637 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 HACE1Q8IYU2 909 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 MOCOSQ96EN8 888 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 SCLT1Q96NL6 688 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 ASB2Q96Q27 587 aa3.4□□□□□ -1.86
EFR3A-202ENST00000519656 TMEM8BA6NDV4 472 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 GRM8O00222 908 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 TMPOP42166 694 aaKnown RBP3.4□□□□□ -1.87
EFR3A-202ENST00000519656 HERVK_113P62684 666 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 IKBKEQ14164 716 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 ABCB5Q2M3G0 1257 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 CERKLQ49MI3 558 aaPredicted RBP3.4□□□□□ -1.87
EFR3A-202ENST00000519656 CCDC178Q5BJE1 867 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 MSL3Q8N5Y2 521 aaKnown RBP3.4□□□□□ -1.87
EFR3A-202ENST00000519656 LRCH3Q96II8 777 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 YME1L1Q96TA2 773 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 IQSEC3Q9UPP2 1182 aaPredicted RBP3.4□□□□□ -1.87
EFR3A-202ENST00000519656 PPLO60437 1756 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 SALL1Q9NSC2 1324 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 NDUFV1P49821 464 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 LMNB2Q03252 620 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 PDE4BQ07343 736 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 NCBP1Q09161 790 aaKnown RBP3.4□□□□□ -1.87
EFR3A-202ENST00000519656 IER5LQ5T953 404 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 SKAP1Q86WV1 359 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 PLCD3Q8N3E9 789 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.4□□□□□ -1.871e-9■■■■■ 31.9
EFR3A-202ENST00000519656 CCDC43Q96MW1 224 aaKnown RBP3.4□□□□□ -1.87
EFR3A-202ENST00000519656 ZIC5Q96T25 663 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 PPP1R12CQ9BZL4 782 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 SEC31BQ9NQW1 1179 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 PCDHA11Q9Y5I1 949 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 ELP1O95163 1332 aa3.4□□□□□ -1.87
EFR3A-202ENST00000519656 C4AP0C0L4 1744 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 TNFAIP2Q03169 654 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 FAM43AQ8N2R8 423 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 ZDHHC15Q96MV8 337 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 TOX2Q96NM4 488 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 ARHGAP39Q9C0H5 1083 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 PRDM12Q9H4Q4 367 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 RREB1Q92766 1687 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 TNS1Q9HBL0 1735 aaKnown RBP3.39□□□□□ -1.87
EFR3A-202ENST00000519656 FAM155AB1AL88 458 aaPredicted RBP3.39□□□□□ -1.87
EFR3A-202ENST00000519656 IDH1O75874 414 aaKnown RBP3.39□□□□□ -1.87
EFR3A-202ENST00000519656 CASTP20810 708 aaKnown RBP3.39□□□□□ -1.87
EFR3A-202ENST00000519656 KRT17Q04695 432 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 SHDQ96IW2 340 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 HIPK3Q9H422 1215 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 TCP11L1Q9NUJ3 509 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 LMCD1Q9NZU5 365 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 PHTF1Q9UMS5 762 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 COL18A1P39060 1754 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 COL24A1Q17RW2 1714 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 ZNF521Q96K83 1311 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 FAM186AA6NE01 2351 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 ADGRB1O14514 1584 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 IFIT2P09913 472 aaKnown RBP3.39□□□□□ -1.87
EFR3A-202ENST00000519656 TMEM132AQ24JP5 1023 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 CCDC96Q2M329 555 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 TKFCQ3LXA3 575 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 ZFPM1Q8IX07 1006 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 CCDC26Q8TAB7 109 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 PHOSPHO2Q8TCD6 241 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 TMEM39BQ9GZU3 492 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 ABHD16BQ9H3Z7 469 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 CXXC1Q9P0U4 656 aaPredicted RBP3.39□□□□□ -1.87
EFR3A-202ENST00000519656 PRKAG3Q9UGI9 489 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 SWAP70Q9UH65 585 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 ALS2Q96Q42 1657 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 C4BP0C0L5 1744 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 NRAPQ86VF7 1730 aa3.39□□□□□ -1.87
EFR3A-202ENST00000519656 INPP5BP32019 993 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms