RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 GADL1Q6ZQY3 521 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 CHD1LQ86WJ1 897 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 SMC5Q8IY18 1101 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 TDHQ8IZJ6 230 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 ANKLE1Q8NAG6 615 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 WDR66Q8TBY9 1149 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 SMCR8Q8TEV9 937 aaPredicted RBP9.02□□□□□ -0.97
PVT1-206ENST00000517838 COA7Q96BR5 231 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 NBPF3Q9H094 633 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 GJD2Q9UKL4 321 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 TRIM75PA6NK02 468 aa9.01□□□□□ -0.97
PVT1-206ENST00000517838 CTNND1O60716 968 aaKnown RBP9.01□□□□□ -0.97
PVT1-206ENST00000517838 IFIT1P09914 478 aaKnown RBP9.01□□□□□ -0.97
PVT1-206ENST00000517838 PRDX5P30044 214 aa9.01□□□□□ -0.97
PVT1-206ENST00000517838 PUM3Q15397 648 aaKnown RBP9.01□□□□□ -0.97
PVT1-206ENST00000517838 PROX2Q3B8N5 592 aa9.01□□□□□ -0.97
PVT1-206ENST00000517838 TREML2Q5T2D2 321 aa9.01□□□□□ -0.97
PVT1-206ENST00000517838 CCDC84Q86UT8 332 aaPredicted RBP9.01□□□□□ -0.97
PVT1-206ENST00000517838 C11orf49Q9H6J7 331 aa9.01□□□□□ -0.97
PVT1-206ENST00000517838 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.01□□□□□ -0.97
PVT1-206ENST00000517838 RPTORQ8N122 1335 aa9.01□□□□□ -0.97
PVT1-206ENST00000517838 HMGCRP04035 888 aa9□□□□□ -0.97
PVT1-206ENST00000517838 MFAP1P55081 439 aaKnown RBP9□□□□□ -0.97
PVT1-206ENST00000517838 BECN1Q14457 450 aa9□□□□□ -0.97
PVT1-206ENST00000517838 PHF6Q8IWS0 365 aaKnown RBP eCLIP9□□□□□ -0.97
PVT1-206ENST00000517838 LPIN2Q92539 896 aa9□□□□□ -0.97
PVT1-206ENST00000517838 IDI2Q9BXS1 227 aa9□□□□□ -0.97
PVT1-206ENST00000517838 UBE2OQ9C0C9 1292 aaKnown RBP9□□□□□ -0.97
PVT1-206ENST00000517838 CDHR5Q9HBB8 845 aa9□□□□□ -0.97
PVT1-206ENST00000517838 HMX1Q9NP08 348 aaPredicted RBP9□□□□□ -0.97
PVT1-206ENST00000517838 OGDHLQ9ULD0 1010 aa9□□□□□ -0.97
PVT1-206ENST00000517838 AGTPBP1Q9UPW5 1226 aa9□□□□□ -0.97
PVT1-206ENST00000517838 DDTLA6NHG4 134 aaPredicted RBP8.99□□□□□ -0.97
PVT1-206ENST00000517838 APBB1O00213 710 aa8.99□□□□□ -0.97
PVT1-206ENST00000517838 ENTPD3O75355 529 aa8.99□□□□□ -0.97
PVT1-206ENST00000517838 LDHBP07195 334 aaKnown RBP8.99□□□□□ -0.97
PVT1-206ENST00000517838 GNAI3P08754 354 aa8.99□□□□□ -0.97
PVT1-206ENST00000517838 FAM110CQ1W6H9 321 aa8.99□□□□□ -0.97
PVT1-206ENST00000517838 GUCD1Q96NT3 240 aa8.99□□□□□ -0.97
PVT1-206ENST00000517838 MEIS3Q99687 375 aa8.99□□□□□ -0.97
PVT1-206ENST00000517838 LRRFIP2Q9Y608 721 aaKnown RBP8.99□□□□□ -0.97
PVT1-206ENST00000517838 PFASO15067 1338 aa8.99□□□□□ -0.97
PVT1-206ENST00000517838 A0A1B0GUL6 1792 aa8.99□□□□□ -0.97
PVT1-206ENST00000517838 EYA2O00167 538 aa8.98□□□□□ -0.97
PVT1-206ENST00000517838 GNAI2P04899 355 aa8.98□□□□□ -0.97
PVT1-206ENST00000517838 COL6A1P12109 1028 aa8.98□□□□□ -0.97
PVT1-206ENST00000517838 SLC5A1P13866 664 aa8.98□□□□□ -0.97
PVT1-206ENST00000517838 RFX5P48382 616 aaPredicted RBP8.98□□□□□ -0.97
PVT1-206ENST00000517838 MAP3K21Q5TCX8 1036 aa8.98□□□□□ -0.97
PVT1-206ENST00000517838 ATG9AQ7Z3C6 839 aa8.98□□□□□ -0.97
PVT1-206ENST00000517838 ZSCAN29Q8IWY8 852 aaPredicted RBP8.98□□□□□ -0.97
PVT1-206ENST00000517838 RPAP2Q8IXW5 612 aaPredicted RBP8.98□□□□□ -0.97
PVT1-206ENST00000517838 TRIB2Q92519 343 aa8.98□□□□□ -0.97
PVT1-206ENST00000517838 RNF166Q96A37 237 aaPredicted RBP8.98□□□□□ -0.97
PVT1-206ENST00000517838 DDX4Q9NQI0 724 aaKnown RBP8.98□□□□□ -0.97
PVT1-206ENST00000517838 NPDC1Q9NQX5 325 aaPredicted RBP8.98□□□□□ -0.97
PVT1-206ENST00000517838 RABGEF1Q9UJ41 708 aa8.98□□□□□ -0.97
PVT1-206ENST00000517838 TRIM6-TRIM34B2RNG4 842 aa8.97□□□□□ -0.97
PVT1-206ENST00000517838 PEX10O60683 326 aa8.97□□□□□ -0.97
PVT1-206ENST00000517838 UBTFL1P0CB47 393 aaPredicted RBP8.97□□□□□ -0.97
PVT1-206ENST00000517838 GCLCP48506 637 aaPredicted RBP8.97□□□□□ -0.97
PVT1-206ENST00000517838 SPP2Q13103 211 aa8.97□□□□□ -0.97
PVT1-206ENST00000517838 FAM109BQ6ICB4 259 aaPredicted RBP8.97□□□□□ -0.97
PVT1-206ENST00000517838 CEP85Q6P2H3 762 aa8.97□□□□□ -0.97
PVT1-206ENST00000517838 PROCA1Q8NCQ7 364 aaPredicted RBP8.97□□□□□ -0.97
PVT1-206ENST00000517838 USP44Q9H0E7 712 aa8.97□□□□□ -0.97
PVT1-206ENST00000517838 ASCC2Q9H1I8 757 aaPredicted RBP8.97□□□□□ -0.97
PVT1-206ENST00000517838 PNMA3Q9UL41 463 aa8.97□□□□□ -0.97
PVT1-206ENST00000517838 GAKO14976 1311 aa8.97□□□□□ -0.97
PVT1-206ENST00000517838 SALL1Q9NSC2 1324 aa8.97□□□□□ -0.97
PVT1-206ENST00000517838 CACNA1FO60840 1977 aa8.97□□□□□ -0.97
PVT1-206ENST00000517838 RFX7Q2KHR2 1363 aa8.97□□□□□ -0.97
PVT1-206ENST00000517838 LAMA2P24043 3122 aaKnown RBP8.96□□□□□ -0.97
PVT1-206ENST00000517838 FAM196BA6NMK8 535 aa8.96□□□□□ -0.98
PVT1-206ENST00000517838 EIF5BO60841 1220 aaKnown RBP8.96□□□□□ -0.98
PVT1-206ENST00000517838 CYP2B6P20813 491 aa8.96□□□□□ -0.98
PVT1-206ENST00000517838 PHKA1P46020 1223 aa8.96□□□□□ -0.98
PVT1-206ENST00000517838 MDM2Q00987 491 aaPredicted RBP8.96□□□□□ -0.98
PVT1-206ENST00000517838 PICALMQ13492 652 aa8.96□□□□□ -0.98
PVT1-206ENST00000517838 RRP1BQ14684 758 aaKnown RBP8.96□□□□□ -0.98
PVT1-206ENST00000517838 LRRC26Q2I0M4 334 aa8.96□□□□□ -0.98
PVT1-206ENST00000517838 ZNF280CQ8ND82 737 aa8.96□□□□□ -0.98
PVT1-206ENST00000517838 FAM161BQ96MY7 647 aa8.96□□□□□ -0.98
PVT1-206ENST00000517838 EYSQ5T1H1 3165 aa8.95□□□□□ -0.98
PVT1-206ENST00000517838 XRCC5P13010 732 aaKnown RBP8.95□□□□□ -0.98
PVT1-206ENST00000517838 SLC4A3P48751 1232 aa8.95□□□□□ -0.98
PVT1-206ENST00000517838 HMGCS2P54868 508 aa8.95□□□□□ -0.98
PVT1-206ENST00000517838 CACNB2Q08289 660 aaPredicted RBP8.95□□□□□ -0.98
PVT1-206ENST00000517838 SH3D19Q5HYK7 790 aa8.95□□□□□ -0.98
PVT1-206ENST00000517838 CASC1Q6TDU7 716 aa8.95□□□□□ -0.98
PVT1-206ENST00000517838 SIRT2Q8IXJ6 389 aa8.95□□□□□ -0.98
PVT1-206ENST00000517838 USP6NLQ92738 828 aa8.95□□□□□ -0.98
PVT1-206ENST00000517838 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.95□□□□□ -0.984e-7■■■■□ 24.3
PVT1-206ENST00000517838 GNL3LQ9NVN8 582 aaKnown RBP8.95□□□□□ -0.98
PVT1-206ENST00000517838 MORF4L1Q9UBU8 362 aa8.95□□□□□ -0.98
PVT1-206ENST00000517838 DENND2AQ9ULE3 1009 aa8.95□□□□□ -0.98
PVT1-206ENST00000517838 GPR75-ASB3A0A0A6YYF3 556 aa8.94□□□□□ -0.98
PVT1-206ENST00000517838 CDC45O75419 566 aa8.94□□□□□ -0.98
PVT1-206ENST00000517838 ADORA1P30542 326 aa8.94□□□□□ -0.98
PVT1-206ENST00000517838 BTDP43251 543 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms