RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 ARPP21Q9UBL0 812 aaPredicted RBP13.93□□□□□ -0.18
SH3RF1-205ENST00000511421 PATL2C9JE40 543 aaKnown RBP13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 MPHOSPH10O00566 681 aaKnown RBP13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 FMNL1O95466 1100 aaPredicted RBP13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 AKR1B1P15121 316 aa13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 GNAT2P19087 354 aa13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 GCLCP48506 637 aaPredicted RBP13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 SOX10P56693 466 aa13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 FAM110CQ1W6H9 321 aa13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 PLEKHM2Q8IWE5 1019 aa13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 ANKRD13CQ8N6S4 541 aa13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 ARMC5Q96C12 935 aa13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 P2RX7Q99572 595 aaKnown RBP13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 SRRDQ9UH36 339 aa13.92□□□□□ -0.18
SH3RF1-205ENST00000511421 A0A1W2PRG0 241 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 USP14P54578 494 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 PRMT2P55345 433 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 FCGRTP55899 365 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 TMEM179Q6ZVK1 233 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 SIAH1Q8IUQ4 282 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 CCDC17Q96LX7 622 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 FEZ1Q99689 392 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 OSBPL3Q9H4L5 887 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 HOXD10P28358 340 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 IRX3P78415 501 aaPredicted RBP13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 ZYXQ15942 572 aaKnown RBP13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 IFNL3Q8IZI9 196 aa13.91□□□□□ -0.18
SH3RF1-205ENST00000511421 MINDY4BA8MYZ0 360 aa13.9□□□□□ -0.18
SH3RF1-205ENST00000511421 FOXP2O15409 715 aa13.9□□□□□ -0.18
SH3RF1-205ENST00000511421 HERVK_113P62684 666 aa13.9□□□□□ -0.18
SH3RF1-205ENST00000511421 POTEEQ6S8J3 1075 aa13.9□□□□□ -0.18
SH3RF1-205ENST00000511421 CCDC129Q6ZRS4 1044 aa13.9□□□□□ -0.18
SH3RF1-205ENST00000511421 TICAM2Q86XR7 235 aa13.9□□□□□ -0.18
SH3RF1-205ENST00000511421 CLEC10AQ8IUN9 316 aa13.9□□□□□ -0.18
SH3RF1-205ENST00000511421 MORF4L1Q9UBU8 362 aa13.9□□□□□ -0.18
SH3RF1-205ENST00000511421 ROBO3Q96MS0 1386 aa13.9□□□□□ -0.18
SH3RF1-205ENST00000511421 APPP05067 770 aa13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 VCAM1P19320 739 aa13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 TDO2P48775 406 aa13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 PRKCZQ05513 592 aa13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 CATSPERGQ6ZRH7 1159 aa13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 ZNF333Q96JL9 665 aa13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 TXNRD2Q9NNW7 524 aa13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 RBPJLQ9UBG7 517 aa13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 GABRQQ9UN88 632 aa13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 MYPNQ86TC9 1320 aa13.89□□□□□ -0.19
SH3RF1-205ENST00000511421 USP17L15C9J2P7 530 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 USP17L13C9JLJ4 530 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 USP17L11C9JVI0 530 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 USP17L18D6R9N7 530 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 USP17L22D6RA61 530 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 USP17L17D6RBQ6 530 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 USP17L19D6RCP7 530 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 USP17L20D6RJB6 530 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 PEX10O60683 326 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 RASA1P20936 1047 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 ICA1Q05084 483 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 USP17L24Q0WX57 530 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 KIAA1755Q5JYT7 1200 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 NACAP1Q9BZK3 213 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 HELLSQ9NRZ9 838 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 KIAA0100Q14667 2235 aaKnown RBP13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 CENPFP49454 3210 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 TNPO2O14787 897 aaKnown RBP13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 STK11IPQ8N1F8 1099 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 SH3TC2Q8TF17 1288 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 FAM227BQ96M60 508 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
SH3RF1-205ENST00000511421 A0A0D9SFI3 127 aa13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 TRIM6-TRIM34B2RNG4 842 aa13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 PDE4AP27815 886 aa13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 FLT3LGP49771 235 aa13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 VPS53Q5VIR6 699 aa13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 NBPF11Q86T75 865 aa13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 RAET1EQ8TD07 263 aa13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 GTF3C2Q8WUA4 911 aaPredicted RBP13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 RPAP3Q9H6T3 665 aaPredicted RBP13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 KANSL2Q9H9L4 492 aa13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 ARHGEF10LQ9HCE6 1279 aa13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 DOCK3Q8IZD9 2030 aa13.87□□□□□ -0.19
SH3RF1-205ENST00000511421 MGAMO43451 1857 aa13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 POTEFA5A3E0 1075 aa13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 EEF2P13639 858 aaKnown RBP13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 MLLT1Q03111 559 aaPredicted RBP13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 NMIQ13287 307 aaPredicted RBP13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 Q3C1V9 767 aa13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 MCMDC2Q4G0Z9 681 aa13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 LBX2Q6XYB7 198 aa13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 GPRC5AQ8NFJ5 357 aa13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 RILPL2Q969X0 211 aa13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 NAPBQ9H115 298 aa13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
SH3RF1-205ENST00000511421 MYH8P13535 1937 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 CNMDO75829 334 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 GRK4P32298 578 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 ERVK-9P63128 1117 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 ERVK-24P63145 666 aa13.85□□□□□ -0.19
SH3RF1-205ENST00000511421 PPARAQ07869 468 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms