RNA–Protein interactions for RNA: ENST00000507079.5

NFKB1-206, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-206ENST00000507079 AKR1B1P15121 316 aa23.32■■□□□ 1.32
NFKB1-206ENST00000507079 PABPC4Q13310 644 aaKnown RBP eCLIP23.32■■□□□ 1.32
NFKB1-206ENST00000507079 CD99L2Q8TCZ2 262 aa23.32■■□□□ 1.32
NFKB1-206ENST00000507079 DIAPH3Q9NSV4 1193 aa23.32■■□□□ 1.32
NFKB1-206ENST00000507079 CPA4Q9UI42 421 aa23.32■■□□□ 1.32
NFKB1-206ENST00000507079 FOXP2O15409 715 aa23.31■■□□□ 1.32
NFKB1-206ENST00000507079 GSPT1P15170 499 aaKnown RBP23.31■■□□□ 1.32
NFKB1-206ENST00000507079 USP17L2Q6R6M4 530 aa23.31■■□□□ 1.32
NFKB1-206ENST00000507079 C17orf99Q6UX52 265 aa23.31■■□□□ 1.32
NFKB1-206ENST00000507079 STK11IPQ8N1F8 1099 aa23.31■■□□□ 1.32
NFKB1-206ENST00000507079 CCDC171Q6TFL3 1326 aa23.31■■□□□ 1.32
NFKB1-206ENST00000507079 USP14P54578 494 aa23.3■■□□□ 1.32
NFKB1-206ENST00000507079 VPS53Q5VIR6 699 aa23.3■■□□□ 1.32
NFKB1-206ENST00000507079 ZNF589Q86UQ0 364 aaPredicted RBP23.3■■□□□ 1.32
NFKB1-206ENST00000507079 ACER1Q8TDN7 264 aa23.3■■□□□ 1.32
NFKB1-206ENST00000507079 SMCR8Q8TEV9 937 aaPredicted RBP23.3■■□□□ 1.32
NFKB1-206ENST00000507079 KIAA1683Q9H0B3 1180 aa23.3■■□□□ 1.32
NFKB1-206ENST00000507079 MKNK2Q9HBH9 465 aa23.3■■□□□ 1.32
NFKB1-206ENST00000507079 MYH4Q9Y623 1939 aa23.29■■□□□ 1.32
NFKB1-206ENST00000507079 LAMA4Q16363 1823 aa23.29■■□□□ 1.32
NFKB1-206ENST00000507079 OSBPP22059 807 aa23.29■■□□□ 1.32
NFKB1-206ENST00000507079 MFAP1P55081 439 aaKnown RBP23.29■■□□□ 1.32
NFKB1-206ENST00000507079 PPARAQ07869 468 aa23.29■■□□□ 1.32
NFKB1-206ENST00000507079 ZYXQ15942 572 aaKnown RBP23.29■■□□□ 1.32
NFKB1-206ENST00000507079 ZNF287Q9HBT7 754 aa23.29■■□□□ 1.32
NFKB1-206ENST00000507079 SLC3A2P08195 630 aaKnown RBP23.28■■□□□ 1.32
NFKB1-206ENST00000507079 RASA1P20936 1047 aa23.28■■□□□ 1.32
NFKB1-206ENST00000507079 ICA1Q05084 483 aa23.28■■□□□ 1.32
NFKB1-206ENST00000507079 KIF22Q14807 665 aa23.28■■□□□ 1.32
NFKB1-206ENST00000507079 PKN2Q16513 984 aaKnown RBP23.28■■□□□ 1.32
NFKB1-206ENST00000507079 IFFO2Q5TF58 517 aa23.28■■□□□ 1.32
NFKB1-206ENST00000507079 CWC27Q6UX04 472 aaKnown RBP23.28■■□□□ 1.32
NFKB1-206ENST00000507079 ABHD8Q96I13 439 aa23.28■■□□□ 1.32
NFKB1-206ENST00000507079 C12orf42Q96LP6 360 aa23.28■■□□□ 1.32
NFKB1-206ENST00000507079 EMILIN3Q9NT22 766 aa23.28■■□□□ 1.32
NFKB1-206ENST00000507079 TRIM17Q9Y577 477 aa23.28■■□□□ 1.32
NFKB1-206ENST00000507079 BCRP11274 1271 aa23.27■■□□□ 1.32
NFKB1-206ENST00000507079 LACTBP83111 547 aaPredicted RBP23.27■■□□□ 1.32
NFKB1-206ENST00000507079 ARHGEF6Q15052 776 aa23.27■■□□□ 1.32
NFKB1-206ENST00000507079 OTOP1Q7RTM1 612 aa23.27■■□□□ 1.32
NFKB1-206ENST00000507079 CLEC10AQ8IUN9 316 aa23.27■■□□□ 1.32
NFKB1-206ENST00000507079 ASCC2Q9H1I8 757 aaPredicted RBP23.27■■□□□ 1.32
NFKB1-206ENST00000507079 ARHGEF10LQ9HCE6 1279 aa23.27■■□□□ 1.32
NFKB1-206ENST00000507079 HSPD1P10809 573 aaKnown RBP23.26■■□□□ 1.31
NFKB1-206ENST00000507079 HOXA7P31268 230 aaPredicted RBP23.26■■□□□ 1.31
NFKB1-206ENST00000507079 IRX3P78415 501 aaPredicted RBP23.26■■□□□ 1.31
NFKB1-206ENST00000507079 PDE4BQ07343 736 aa23.26■■□□□ 1.31
NFKB1-206ENST00000507079 ALX1Q15699 326 aa23.26■■□□□ 1.31
NFKB1-206ENST00000507079 EFCC1Q9HA90 598 aa23.26■■□□□ 1.31
NFKB1-206ENST00000507079 ZMYM6O95789 1325 aa23.26■■□□□ 1.31
NFKB1-206ENST00000507079 A0A1W2PRG0 241 aa23.25■■□□□ 1.31
NFKB1-206ENST00000507079 PRDM1O75626 825 aa23.25■■□□□ 1.31
NFKB1-206ENST00000507079 CAP1Q01518 475 aa23.25■■□□□ 1.31
NFKB1-206ENST00000507079 FBXO46Q6PJ61 603 aaPredicted RBP23.25■■□□□ 1.31
NFKB1-206ENST00000507079 SH2D4AQ9H788 454 aa23.25■■□□□ 1.31
NFKB1-206ENST00000507079 KANSL2Q9H9L4 492 aa23.25■■□□□ 1.31
NFKB1-206ENST00000507079 VCAM1P19320 739 aa23.24■■□□□ 1.31
NFKB1-206ENST00000507079 GCLCP48506 637 aaPredicted RBP23.24■■□□□ 1.31
NFKB1-206ENST00000507079 ZNF444Q8N0Y2 327 aaPredicted RBP23.24■■□□□ 1.31
NFKB1-206ENST00000507079 ARHGAP39Q9C0H5 1083 aa23.24■■□□□ 1.31
NFKB1-206ENST00000507079 PARP14Q460N5 1801 aa23.24■■□□□ 1.31
NFKB1-206ENST00000507079 FGAP02671 866 aa23.23■■□□□ 1.31
NFKB1-206ENST00000507079 ANKRD13CQ8N6S4 541 aa23.23■■□□□ 1.31
NFKB1-206ENST00000507079 TMX2Q9Y320 296 aa23.23■■□□□ 1.31
NFKB1-206ENST00000507079 ECM2O94769 699 aaPredicted RBP23.22■■□□□ 1.31
NFKB1-206ENST00000507079 EEF2P13639 858 aaKnown RBP23.22■■□□□ 1.31
NFKB1-206ENST00000507079 ATP2B2Q01814 1243 aa23.22■■□□□ 1.31
NFKB1-206ENST00000507079 CTDSPL2Q05D32 466 aa23.22■■□□□ 1.31
NFKB1-206ENST00000507079 FAM110CQ1W6H9 321 aa23.22■■□□□ 1.31
NFKB1-206ENST00000507079 SIAH1Q8IUQ4 282 aa23.22■■□□□ 1.31
NFKB1-206ENST00000507079 RUFY2Q8WXA3 655 aa23.22■■□□□ 1.31
NFKB1-206ENST00000507079 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.22■■□□□ 1.31
NFKB1-206ENST00000507079 ANAPC4Q9UJX5 808 aa23.22■■□□□ 1.31
NFKB1-206ENST00000507079 USP17L15C9J2P7 530 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 USP17L13C9JLJ4 530 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 USP17L11C9JVI0 530 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 USP17L18D6R9N7 530 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 USP17L22D6RA61 530 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 USP17L17D6RBQ6 530 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 USP17L19D6RCP7 530 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 USP17L20D6RJB6 530 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 CAPN15O75808 1086 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 PSMC4P43686 418 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 HERVK_113P62684 666 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 USP17L24Q0WX57 530 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 P2RX7Q99572 595 aaKnown RBP23.21■■□□□ 1.31
NFKB1-206ENST00000507079 PLIN4Q96Q06 1357 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 RLFQ13129 1914 aa23.21■■□□□ 1.31
NFKB1-206ENST00000507079 RAD50Q92878 1312 aa23.2■■□□□ 1.3
NFKB1-206ENST00000507079 GNRH1P01148 92 aa23.2■■□□□ 1.3
NFKB1-206ENST00000507079 TSPY3P0CV98 308 aa23.2■■□□□ 1.3
NFKB1-206ENST00000507079 TSPY8P0CW00 308 aa23.2■■□□□ 1.3
NFKB1-206ENST00000507079 CTGFP29279 349 aa23.2■■□□□ 1.3
NFKB1-206ENST00000507079 LPAR1Q92633 364 aa23.2■■□□□ 1.3
NFKB1-206ENST00000507079 RPAP3Q9H6T3 665 aaPredicted RBP23.2■■□□□ 1.3
NFKB1-206ENST00000507079 HPS5Q9UPZ3 1129 aa23.2■■□□□ 1.3
NFKB1-206ENST00000507079 PTPN22Q9Y2R2 807 aa23.2■■□□□ 1.3
NFKB1-206ENST00000507079 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.2■■□□□ 1.3
NFKB1-206ENST00000507079 FMNL1O95466 1100 aaPredicted RBP23.19■■□□□ 1.3
NFKB1-206ENST00000507079 FCGRTP55899 365 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms