RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 RASGRP2Q7LDG7 609 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 SAMD7Q7Z3H4 446 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 NBPF11Q86T75 865 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 TTC6Q86TZ1 520 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 IQCA1Q86XH1 822 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 CLEC10AQ8IUN9 316 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 AMOTL1Q8IY63 956 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 OGFOD1Q8N543 542 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 FOXD4L4Q8WXT5 416 aaPredicted RBP8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 DPF2Q92785 391 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 DDX11Q96FC9 970 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 CEP95Q96GE4 821 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 MKNK2Q9HBH9 465 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 SCAF8Q9UPN6 1271 aaKnown RBP8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 SLC12A7Q9Y666 1083 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 GJA3Q9Y6H8 435 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 BAZ2BQ9UIF8 2168 aaKnown RBP8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 DOCK1Q14185 1865 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 ERICH2A1L162 156 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 STX6O43752 255 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 DDAH1O94760 285 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 HLA-DOAP06340 250 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 TSPY3P0CV98 308 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 TSPY8P0CW00 308 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 SLC35G1Q2M3R5 365 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 TBC1D10BQ4KMP7 808 aaPredicted RBP8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 IFIT1BQ5T764 474 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 FKBP1CQ5VVH2 108 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 TATDN1Q6P1N9 297 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 DGKHQ86XP1 1220 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 ZNF444Q8N0Y2 327 aaPredicted RBP8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 GPC2Q8N158 579 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 CMTR1Q8N1G2 835 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 TRPM4Q8TD43 1214 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 FAM151AQ8WW52 585 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 PHKBQ93100 1093 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 SHISA4Q96DD7 197 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 AIFM3Q96NN9 605 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 TMEM47Q9BQJ4 181 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 TMEM39BQ9GZU3 492 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 DHX36Q9H2U1 1008 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 GPRC5DQ9NZD1 345 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 SWAP70Q9UH65 585 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 CNOT7Q9UIV1 285 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 OTOFQ9HC10 1997 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 PHIPQ8WWQ0 1821 aa8.07□□□□□ -1.12
TOPBP1-203ENST00000503464 STK36Q9NRP7 1315 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 SSC5DA1L4H1 1573 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 PLEKHA8P1O95397 391 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 BAG4O95429 457 aaKnown RBP8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 F13A1P00488 732 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 PRR29P0C7W0 189 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 ZSCAN22P10073 491 aaPredicted RBP8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 IFNAR1P17181 557 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 GUCY1A2P33402 732 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 MCM4P33991 863 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 FOSBP53539 338 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 HIRAP54198 1017 aaPredicted RBP8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 RTN1Q16799 776 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 KIF4BQ2VIQ3 1234 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 RBM26Q5T8P6 1007 aaKnown RBP8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 C9orf131Q5VYM1 1079 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 LARP1BQ659C4 914 aaKnown RBP8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 FAM83AQ86UY5 434 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 TMTC2Q8N394 836 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 FANCBQ8NB91 859 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 NUP133Q8WUM0 1156 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 TEPSINQ96N21 525 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 VEZTQ9HBM0 779 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 ZNF287Q9HBT7 754 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 GJB4Q9NTQ9 266 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 RNF181Q9P0P0 153 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 PI4KBQ9UBF8 816 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 SCN4AP35499 1836 aa8.06□□□□□ -1.12
TOPBP1-203ENST00000503464 CNTNAP5Q8WYK1 1306 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 WDR33Q9C0J8 1336 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 VPS37CA5D8V6 355 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 DDNO94850 711 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 FMNL1O95466 1100 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 EPS15P42566 896 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 MMP14P50281 582 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 HMGN5P82970 282 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 MAP3K10Q02779 954 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 RESTQ13127 1097 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 GRM4Q14833 912 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 OTUD7BQ6GQQ9 843 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 TMTC3Q6ZXV5 915 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 CATIPQ7Z7H3 387 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 SIAH1Q8IUQ4 282 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 FOXP4Q8IVH2 680 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 ZSCAN29Q8IWY8 852 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 CRACR2BQ8N4Y2 399 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 PNMA1Q8ND90 353 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 CSRNP1Q96S65 589 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 MTMR4Q9NYA4 1195 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 TMOD2Q9NZR1 351 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 ORC3Q9UBD5 711 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 MAD2L2Q9UI95 211 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 HACL1Q9UJ83 578 aa8.05□□□□□ -1.12
TOPBP1-203ENST00000503464 WDR90Q96KV7 1748 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms