RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 ZYXQ15942 572 aaKnown RBP20.43■□□□□ 0.86
CDKN2A-209ENST00000498628 KIAA0100Q14667 2235 aaKnown RBP20.43■□□□□ 0.86
CDKN2A-209ENST00000498628 HTTP42858 3142 aa20.43■□□□□ 0.86
CDKN2A-209ENST00000498628 CCNA1P78396 465 aa20.42■□□□□ 0.86
CDKN2A-209ENST00000498628 TMEM179Q6ZVK1 233 aa20.42■□□□□ 0.86
CDKN2A-209ENST00000498628 NUDT12Q9BQG2 462 aa20.42■□□□□ 0.86
CDKN2A-209ENST00000498628 SLC4A4Q9Y6R1 1079 aa20.42■□□□□ 0.86
CDKN2A-209ENST00000498628 GLRX3O76003 335 aaKnown RBP20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 SGPL1O95470 568 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 ERVK-9P63128 1117 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 ERVK-24P63145 666 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 CATSPERGQ6ZRH7 1159 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 TRMT44Q8IYL2 757 aaKnown RBP20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 SOCS4Q8WXH5 440 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 CCDC17Q96LX7 622 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 PAGR1Q9BTK6 254 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 UNC93B1Q9H1C4 597 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 SH2D4AQ9H788 454 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 RBPJLQ9UBG7 517 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 RABGAP1Q9Y3P9 1069 aa20.41■□□□□ 0.86
CDKN2A-209ENST00000498628 ERC2O15083 957 aa20.4■□□□□ 0.86
CDKN2A-209ENST00000498628 PRKAB2O43741 272 aa20.4■□□□□ 0.86
CDKN2A-209ENST00000498628 ZFYP08048 801 aaPredicted RBP20.4■□□□□ 0.86
CDKN2A-209ENST00000498628 RRP1P56182 461 aaKnown RBP20.4■□□□□ 0.86
CDKN2A-209ENST00000498628 SEPT2Q15019 361 aa20.4■□□□□ 0.86
CDKN2A-209ENST00000498628 NAV1Q8NEY1 1877 aa20.4■□□□□ 0.86
CDKN2A-209ENST00000498628 ACER1Q8TDN7 264 aa20.4■□□□□ 0.86
CDKN2A-209ENST00000498628 U2AF1L4Q8WU68 220 aaKnown RBP20.4■□□□□ 0.86
CDKN2A-209ENST00000498628 HTATIP2Q9BUP3 242 aa20.4■□□□□ 0.86
CDKN2A-209ENST00000498628 GJD2Q9UKL4 321 aa20.4■□□□□ 0.86
CDKN2A-209ENST00000498628 TFRCP02786 760 aaKnown RBP20.39■□□□□ 0.85
CDKN2A-209ENST00000498628 HMGCRP04035 888 aa20.39■□□□□ 0.85
CDKN2A-209ENST00000498628 C12orf60Q5U649 245 aa20.39■□□□□ 0.85
CDKN2A-209ENST00000498628 KBTBD3Q8NAB2 608 aa20.39■□□□□ 0.85
CDKN2A-209ENST00000498628 ARHGEF10LQ9HCE6 1279 aa20.39■□□□□ 0.85
CDKN2A-209ENST00000498628 TXNRD2Q9NNW7 524 aa20.39■□□□□ 0.85
CDKN2A-209ENST00000498628 TTC41PQ6P2S7 1318 aa20.38■□□□□ 0.85
CDKN2A-209ENST00000498628 USP17L12C9JPN9 530 aa20.38■□□□□ 0.85
CDKN2A-209ENST00000498628 USP17L21D6R901 530 aa20.38■□□□□ 0.85
CDKN2A-209ENST00000498628 CYP2D6P10635 497 aa20.38■□□□□ 0.85
CDKN2A-209ENST00000498628 VCAM1P19320 739 aa20.38■□□□□ 0.85
CDKN2A-209ENST00000498628 GUCY1A2P33402 732 aa20.38■□□□□ 0.85
CDKN2A-209ENST00000498628 PLEKHH3Q7Z736 793 aa20.38■□□□□ 0.85
CDKN2A-209ENST00000498628 RPAP3Q9H6T3 665 aaPredicted RBP20.38■□□□□ 0.85
CDKN2A-209ENST00000498628 HOXC10Q9NYD6 342 aa20.38■□□□□ 0.85
CDKN2A-209ENST00000498628 ARPP21Q9UBL0 812 aaPredicted RBP20.38■□□□□ 0.85
CDKN2A-209ENST00000498628 RNF113AO15541 343 aaKnown RBP20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 XRCC5P13010 732 aaKnown RBP20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 CYP2B6P20813 491 aa20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 Q3C1V9 767 aa20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 SLFNL1Q499Z3 407 aa20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 DPF3Q92784 378 aa20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 SHISA4Q96DD7 197 aa20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 DYNLL2Q96FJ2 89 aa20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 DEFB118Q96PH6 123 aa20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 PUS7LQ9H0K6 701 aaKnown RBP20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 HMX1Q9NP08 348 aaPredicted RBP20.37■□□□□ 0.85
CDKN2A-209ENST00000498628 RPTORQ8N122 1335 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 FARP2O94887 1054 aaPredicted RBP20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 GNAT2P19087 354 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 RGS2P41220 211 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 CDK8P49336 464 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 COG2Q14746 738 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 GIMAP6Q6P9H5 292 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 LBX2Q6XYB7 198 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 C16orf86Q6ZW13 317 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 GPR142Q7Z601 462 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 APPBP2Q92624 585 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 LPAR1Q92633 364 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 PAK6Q9NQU5 681 aaPredicted RBP20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 PCDHB15Q9Y5E8 787 aa20.36■□□□□ 0.85
CDKN2A-209ENST00000498628 SLC34A2O95436 690 aa20.35■□□□□ 0.85
CDKN2A-209ENST00000498628 ICA1Q05084 483 aa20.35■□□□□ 0.85
CDKN2A-209ENST00000498628 CTR9Q6PD62 1173 aa20.35■□□□□ 0.85
CDKN2A-209ENST00000498628 SLC44A5Q8NCS7 719 aa20.35■□□□□ 0.85
CDKN2A-209ENST00000498628 STRBPQ96SI9 672 aaKnown RBP20.35■□□□□ 0.85
CDKN2A-209ENST00000498628 TANGO6Q9C0B7 1094 aa20.35■□□□□ 0.85
CDKN2A-209ENST00000498628 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.35■□□□□ 0.85
CDKN2A-209ENST00000498628 IVNS1ABPQ9Y6Y0 642 aa20.35■□□□□ 0.85
CDKN2A-209ENST00000498628 DDX60LQ5H9U9 1706 aaKnown RBP20.35■□□□□ 0.85
CDKN2A-209ENST00000498628 CENPFP49454 3210 aa20.34■□□□□ 0.85
CDKN2A-209ENST00000498628 AKR1B1P15121 316 aa20.34■□□□□ 0.85
CDKN2A-209ENST00000498628 ZKSCAN1P17029 563 aaPredicted RBP20.34■□□□□ 0.85
CDKN2A-209ENST00000498628 WDR78Q5VTH9 848 aa20.34■□□□□ 0.85
CDKN2A-209ENST00000498628 KANSL2Q9H9L4 492 aa20.34■□□□□ 0.85
CDKN2A-209ENST00000498628 ZNF287Q9HBT7 754 aa20.34■□□□□ 0.85
CDKN2A-209ENST00000498628 A0A1W2PRG0 241 aa20.33■□□□□ 0.85
CDKN2A-209ENST00000498628 EVX2Q03828 476 aa20.33■□□□□ 0.85
CDKN2A-209ENST00000498628 AAMPQ13685 434 aa20.33■□□□□ 0.85
CDKN2A-209ENST00000498628 SBK1Q52WX2 424 aa20.33■□□□□ 0.85
CDKN2A-209ENST00000498628 PORCNQ9H237 461 aa20.33■□□□□ 0.85
CDKN2A-209ENST00000498628 MKNK2Q9HBH9 465 aa20.33■□□□□ 0.85
CDKN2A-209ENST00000498628 TMX2Q9Y320 296 aa20.33■□□□□ 0.85
CDKN2A-209ENST00000498628 CYP2D7A0A087X1C5 515 aa20.32■□□□□ 0.84
CDKN2A-209ENST00000498628 SPDYE16A6NNV3 312 aaPredicted RBP20.32■□□□□ 0.84
CDKN2A-209ENST00000498628 PEX10O60683 326 aa20.32■□□□□ 0.84
CDKN2A-209ENST00000498628 CHGBP05060 677 aa20.32■□□□□ 0.84
CDKN2A-209ENST00000498628 APPP05067 770 aa20.32■□□□□ 0.84
CDKN2A-209ENST00000498628 MORN1Q5T089 497 aa20.32■□□□□ 0.84
CDKN2A-209ENST00000498628 TSHZ3Q63HK5 1081 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms