RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 DNAJB8Q8NHS0 232 aa9.27□□□□□ -0.93
MDM2-220ENST00000496959 FBXO27Q8NI29 283 aa9.27□□□□□ -0.93
MDM2-220ENST00000496959 SEMA3GQ9NS98 782 aa9.27□□□□□ -0.93
MDM2-220ENST00000496959 LMCD1Q9NZU5 365 aa9.27□□□□□ -0.93
MDM2-220ENST00000496959 KLHL3Q9UH77 587 aa9.27□□□□□ -0.93
MDM2-220ENST00000496959 ADAMTS6Q9UKP5 1117 aa9.27□□□□□ -0.93
MDM2-220ENST00000496959 ST14Q9Y5Y6 855 aa9.27□□□□□ -0.93
MDM2-220ENST00000496959 GREM1O60565 184 aa9.26□□□□□ -0.93
MDM2-220ENST00000496959 THAP5Q7Z6K1 395 aa9.26□□□□□ -0.93
MDM2-220ENST00000496959 PIWIL2Q8TC59 973 aaKnown RBP9.26□□□□□ -0.93
MDM2-220ENST00000496959 ZNF296Q8WUU4 475 aaPredicted RBP9.26□□□□□ -0.93
MDM2-220ENST00000496959 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
MDM2-220ENST00000496959 LRRC3Q9BY71 257 aa9.26□□□□□ -0.93
MDM2-220ENST00000496959 TNK2Q07912 1038 aa9.25□□□□□ -0.93
MDM2-220ENST00000496959 ATG4DQ86TL0 474 aaPredicted RBP9.25□□□□□ -0.93
MDM2-220ENST00000496959 ATP13A1Q9HD20 1204 aa9.25□□□□□ -0.93
MDM2-220ENST00000496959 RBM47A0AV96 593 aaKnown RBP9.24□□□□□ -0.93
MDM2-220ENST00000496959 CHURC1-FNTBB4DL54 471 aa9.24□□□□□ -0.93
MDM2-220ENST00000496959 TNNI2P48788 182 aa9.24□□□□□ -0.93
MDM2-220ENST00000496959 PHACTR4Q8IZ21 702 aa9.24□□□□□ -0.93
MDM2-220ENST00000496959 LRRN4CLQ8ND94 238 aa9.24□□□□□ -0.93
MDM2-220ENST00000496959 PPP1R13LQ8WUF5 828 aa9.24□□□□□ -0.93
MDM2-220ENST00000496959 UBE2FQ969M7 185 aa9.24□□□□□ -0.93
MDM2-220ENST00000496959 CCDC74BQ96LY2 380 aa9.24□□□□□ -0.93
MDM2-220ENST00000496959 PRDM7Q9NQW5 492 aa9.24□□□□□ -0.93
MDM2-220ENST00000496959 ZSWIM5Q9P217 1185 aa9.24□□□□□ -0.93
MDM2-220ENST00000496959 BACH2Q9BYV9 841 aa9.23□□□□□ -0.93
MDM2-220ENST00000496959 CARS2Q9HA77 564 aaKnown RBP9.23□□□□□ -0.93
MDM2-220ENST00000496959 BRMS1Q9HCU9 246 aa9.23□□□□□ -0.93
MDM2-220ENST00000496959 KCNH3Q9ULD8 1083 aa9.23□□□□□ -0.93
MDM2-220ENST00000496959 PAPLNO95428 1278 aa9.22□□□□□ -0.93
MDM2-220ENST00000496959 ZNF76P36508 570 aa9.22□□□□□ -0.93
MDM2-220ENST00000496959 CHMP4BP1P59074 171 aa9.22□□□□□ -0.93
MDM2-220ENST00000496959 ADAMTS1Q9UHI8 967 aa9.22□□□□□ -0.93
MDM2-220ENST00000496959 PCDHB14Q9Y5E9 798 aa9.22□□□□□ -0.93
MDM2-220ENST00000496959 GBP1P32455 592 aa9.21□□□□□ -0.94
MDM2-220ENST00000496959 LDLRAD1Q5T700 205 aa9.21□□□□□ -0.94
MDM2-220ENST00000496959 RNF141Q8WVD5 230 aa9.21□□□□□ -0.94
MDM2-220ENST00000496959 Q96M66 194 aa9.21□□□□□ -0.94
MDM2-220ENST00000496959 TRIT1Q9H3H1 467 aaKnown RBP9.21□□□□□ -0.94
MDM2-220ENST00000496959 ATE1O95260 518 aa9.2□□□□□ -0.94
MDM2-220ENST00000496959 APOBRQ0VD83 1088 aa9.2□□□□□ -0.94
MDM2-220ENST00000496959 SEZ6Q53EL9 994 aa9.2□□□□□ -0.94
MDM2-220ENST00000496959 TMPRSS7Q7RTY8 843 aa9.2□□□□□ -0.94
MDM2-220ENST00000496959 BAHD1Q8TBE0 780 aaPredicted RBP9.2□□□□□ -0.94
MDM2-220ENST00000496959 NT5C1AQ9BXI3 368 aa9.2□□□□□ -0.94
MDM2-220ENST00000496959 METTL5Q9NRN9 209 aaKnown RBP9.2□□□□□ -0.94
MDM2-220ENST00000496959 UBP1Q9NZI7 540 aa9.2□□□□□ -0.94
MDM2-220ENST00000496959 CRKP46108 304 aa9.19□□□□□ -0.94
MDM2-220ENST00000496959 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
MDM2-220ENST00000496959 CCDC120Q96HB5 630 aa9.19□□□□□ -0.94
MDM2-220ENST00000496959 KIF2CQ99661 725 aa9.19□□□□□ -0.94
MDM2-220ENST00000496959 SPON2Q9BUD6 331 aa9.19□□□□□ -0.94
MDM2-220ENST00000496959 GPATCH2Q9NW75 528 aa9.19□□□□□ -0.94
MDM2-220ENST00000496959 SLC22A31A6NKX4 558 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 DNAJA2O60884 412 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 RAG1P15918 1043 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 MCM4P33991 863 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 ZNF165P49910 485 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 ARSHQ5FYA8 562 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 USP48Q86UV5 1035 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 KIAA0825Q8IV33 1275 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 REXO1Q8N1G1 1221 aaKnown RBP9.18□□□□□ -0.94
MDM2-220ENST00000496959 DTWD2Q8NBA8 298 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 FLAD1Q8NFF5 587 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 FAM168AQ92567 244 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 NKD1Q969G9 470 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 KREMEN1Q96MU8 473 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 EHMT1Q9H9B1 1298 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 GMIPQ9P107 970 aa9.18□□□□□ -0.94
MDM2-220ENST00000496959 RBAK-RBAKDNI3L0D1 243 aa9.17□□□□□ -0.94
MDM2-220ENST00000496959 RGS13O14921 159 aa9.17□□□□□ -0.94
MDM2-220ENST00000496959 TPP2P29144 1249 aaPredicted RBP9.17□□□□□ -0.94
MDM2-220ENST00000496959 FANCCQ00597 558 aa9.17□□□□□ -0.94
MDM2-220ENST00000496959 GK5Q6ZS86 529 aa9.17□□□□□ -0.94
MDM2-220ENST00000496959 RNF34Q969K3 372 aa9.17□□□□□ -0.94
MDM2-220ENST00000496959 ASPNQ9BXN1 380 aa9.17□□□□□ -0.94
MDM2-220ENST00000496959 GPR62Q9BZJ7 368 aa9.17□□□□□ -0.94
MDM2-220ENST00000496959 DUSP15Q9H1R2 295 aaPredicted RBP9.17□□□□□ -0.94
MDM2-220ENST00000496959 VAMP1P23763 118 aa9.16□□□□□ -0.94
MDM2-220ENST00000496959 KRTAP9-2Q9BYQ4 174 aa9.16□□□□□ -0.94
MDM2-220ENST00000496959 CTNND2Q9UQB3 1225 aa9.16□□□□□ -0.94
MDM2-220ENST00000496959 LRRN2O75325 713 aa9.15□□□□□ -0.94
MDM2-220ENST00000496959 SRFP11831 508 aa9.15□□□□□ -0.94
MDM2-220ENST00000496959 AFMP43652 599 aa9.15□□□□□ -0.94
MDM2-220ENST00000496959 CREG2Q8IUH2 290 aa9.15□□□□□ -0.94
MDM2-220ENST00000496959 SLITRK4Q8IW52 837 aa9.15□□□□□ -0.94
MDM2-220ENST00000496959 EAF1Q96JC9 268 aaPredicted RBP9.15□□□□□ -0.94
MDM2-220ENST00000496959 ALPK1Q96QP1 1244 aa9.15□□□□□ -0.94
MDM2-220ENST00000496959 ESR1P03372 595 aa9.14□□□□□ -0.95
MDM2-220ENST00000496959 CLCQ05315 142 aa9.14□□□□□ -0.95
MDM2-220ENST00000496959 LRRFIP1Q32MZ4 808 aaKnown RBP9.14□□□□□ -0.95
MDM2-220ENST00000496959 CDCP2Q5VXM1 449 aa9.14□□□□□ -0.95
MDM2-220ENST00000496959 OVOS1Q6IE37 1185 aa9.14□□□□□ -0.95
MDM2-220ENST00000496959 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.14□□□□□ -0.95
MDM2-220ENST00000496959 DUSP13Q9UII6 198 aa9.14□□□□□ -0.95
MDM2-220ENST00000496959 CARMIL2Q6F5E8 1435 aa9.14□□□□□ -0.95
MDM2-220ENST00000496959 WASH4PA8MWX3 477 aa9.13□□□□□ -0.95
MDM2-220ENST00000496959 SCAMP3O14828 347 aaKnown RBP9.13□□□□□ -0.95
MDM2-220ENST00000496959 GDNFP39905 211 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms