RNA–Protein interactions for RNA: ENST00000495727.2

RC3H2-209, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-209ENST00000495727 TAF1DQ9H5J8 278 aaPredicted RBP6.96□□□□□ -1.3
RC3H2-209ENST00000495727 NOP53Q9NZM5 478 aaKnown RBP6.96□□□□□ -1.3
RC3H2-209ENST00000495727 CNTN3Q9P232 1028 aa6.96□□□□□ -1.3
RC3H2-209ENST00000495727 IQCA1LA6NCM1 817 aa6.95□□□□□ -1.3
RC3H2-209ENST00000495727 SPDYE3A6NKU9 549 aa6.95□□□□□ -1.3
RC3H2-209ENST00000495727 NFKBIEO00221 500 aa6.95□□□□□ -1.3
RC3H2-209ENST00000495727 TREHO43280 583 aa6.95□□□□□ -1.3
RC3H2-209ENST00000495727 CPNE3O75131 537 aaKnown RBP6.95□□□□□ -1.3
RC3H2-209ENST00000495727 DDNO94850 711 aaPredicted RBP6.95□□□□□ -1.3
RC3H2-209ENST00000495727 NCAPG2Q86XI2 1143 aa6.95□□□□□ -1.3
RC3H2-209ENST00000495727 ZFYVE28Q9HCC9 887 aa6.95□□□□□ -1.3
RC3H2-209ENST00000495727 JPH1Q9HDC5 661 aaPredicted RBP6.95□□□□□ -1.3
RC3H2-209ENST00000495727 SALL4Q9UJQ4 1053 aa6.95□□□□□ -1.3
RC3H2-209ENST00000495727 FOXD3Q9UJU5 478 aaPredicted RBP6.95□□□□□ -1.3
RC3H2-209ENST00000495727 COL5A3P25940 1745 aaPredicted RBP6.94□□□□□ -1.3
RC3H2-209ENST00000495727 SMNDC1O75940 238 aaKnown RBP eCLIP6.94□□□□□ -1.3
RC3H2-209ENST00000495727 CYP2E1P05181 493 aaPredicted RBP6.94□□□□□ -1.3
RC3H2-209ENST00000495727 SNRPNP63162 240 aaKnown RBP6.94□□□□□ -1.3
RC3H2-209ENST00000495727 COL19A1Q14993 1142 aa6.94□□□□□ -1.3
RC3H2-209ENST00000495727 EAPPQ56P03 285 aaPredicted RBP6.94□□□□□ -1.3
RC3H2-209ENST00000495727 MAP1SQ66K74 1059 aaPredicted RBP6.94□□□□□ -1.3
RC3H2-209ENST00000495727 LINC00114Q6XXX2 140 aa6.94□□□□□ -1.3
RC3H2-209ENST00000495727 CNTROBQ8N137 903 aa6.94□□□□□ -1.3
RC3H2-209ENST00000495727 CEP120Q8N960 986 aa6.94□□□□□ -1.3
RC3H2-209ENST00000495727 PLD4Q96BZ4 506 aa6.94□□□□□ -1.3
RC3H2-209ENST00000495727 SMG9Q9H0W8 520 aaKnown RBP6.94□□□□□ -1.3
RC3H2-209ENST00000495727 DDX21Q9NR30 783 aaKnown RBP eCLIP6.94□□□□□ -1.3
RC3H2-209ENST00000495727 KANSL3Q9P2N6 904 aa6.94□□□□□ -1.3
RC3H2-209ENST00000495727 ACEP12821 1306 aa6.94□□□□□ -1.3
RC3H2-209ENST00000495727 PALLDQ8WX93 1383 aa6.94□□□□□ -1.3
RC3H2-209ENST00000495727 KIAA0100Q14667 2235 aaKnown RBP6.93□□□□□ -1.3
RC3H2-209ENST00000495727 RGPD2P0DJD1 1756 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 BCORQ6W2J9 1755 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 ARFGEF2Q9Y6D5 1785 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 EREGO14944 169 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 NID1P14543 1247 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 ERCC3P19447 782 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 CHRNA5P30532 468 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 FMR1Q06787 632 aaKnown RBP eCLIP6.93□□□□□ -1.3
RC3H2-209ENST00000495727 CCDC27Q2M243 656 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 HFE2Q6ZVN8 426 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.93□□□□□ -1.3
RC3H2-209ENST00000495727 GZF1Q9H116 711 aaPredicted RBP6.93□□□□□ -1.3
RC3H2-209ENST00000495727 POGKQ9P215 609 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 ADGRB1O14514 1584 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 TTC28Q96AY4 2481 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 NRXN2Q9P2S2 1712 aa6.93□□□□□ -1.3
RC3H2-209ENST00000495727 J3QW42 95 aa6.92□□□□□ -1.3
RC3H2-209ENST00000495727 HMGB2P26583 209 aaKnown RBP6.92□□□□□ -1.3
RC3H2-209ENST00000495727 AFF1P51825 1210 aaKnown RBP6.92□□□□□ -1.3
RC3H2-209ENST00000495727 DSC3Q14574 896 aa6.92□□□□□ -1.3
RC3H2-209ENST00000495727 ARHGEF25Q86VW2 580 aa6.92□□□□□ -1.3
RC3H2-209ENST00000495727 GALNT12Q8IXK2 581 aa6.92□□□□□ -1.3
RC3H2-209ENST00000495727 CSRNP1Q96S65 589 aa6.92□□□□□ -1.3
RC3H2-209ENST00000495727 PBX4Q9BYU1 374 aa6.92□□□□□ -1.3
RC3H2-209ENST00000495727 NIF3L1Q9GZT8 377 aa6.92□□□□□ -1.3
RC3H2-209ENST00000495727 COL11A2P13942 1736 aaPredicted RBP6.92□□□□□ -1.3
RC3H2-209ENST00000495727 EIF1AYO14602 144 aaKnown RBP6.91□□□□□ -1.3
RC3H2-209ENST00000495727 ORC1Q13415 861 aa6.91□□□□□ -1.3
RC3H2-209ENST00000495727 COL9A3Q14050 684 aaPredicted RBP6.91□□□□□ -1.3
RC3H2-209ENST00000495727 GRIK5Q16478 980 aa6.91□□□□□ -1.3
RC3H2-209ENST00000495727 DTWD1Q8N5C7 304 aa6.91□□□□□ -1.3
RC3H2-209ENST00000495727 DDX54Q8TDD1 881 aaKnown RBP6.91□□□□□ -1.3
RC3H2-209ENST00000495727 NUDT8Q8WV74 236 aa6.91□□□□□ -1.3
RC3H2-209ENST00000495727 MUC3BQ9H195 1237 aa6.91□□□□□ -1.3
RC3H2-209ENST00000495727 SRA1Q9HD15 236 aaKnown RBP6.91□□□□□ -1.3
RC3H2-209ENST00000495727 SAGE1Q9NXZ1 904 aa6.91□□□□□ -1.3
RC3H2-209ENST00000495727 CNTNAP5Q8WYK1 1306 aa6.91□□□□□ -1.3
RC3H2-209ENST00000495727 INSRP06213 1382 aa6.91□□□□□ -1.3
RC3H2-209ENST00000495727 H0YGN5 161 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 FGD1P98174 961 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 ATP11AP98196 1134 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 PLCB3Q01970 1234 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 KCNMA1Q12791 1236 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 ENOX2Q16206 610 aaKnown RBP6.9□□□□□ -1.3
RC3H2-209ENST00000495727 PKN2Q16513 984 aaKnown RBP6.9□□□□□ -1.3
RC3H2-209ENST00000495727 CST9Q5W186 159 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 TMEM102Q8N9M5 508 aaPredicted RBP6.9□□□□□ -1.3
RC3H2-209ENST00000495727 DCAF11Q8TEB1 546 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 FBF1Q8TES7 1133 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 TRIM11Q96F44 468 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 RASSF4Q9H2L5 321 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 DZANK1Q9NVP4 752 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 STXBP5LQ9Y2K9 1186 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 SYNGAP1Q96PV0 1343 aa6.9□□□□□ -1.3
RC3H2-209ENST00000495727 PIEZO1Q92508 2521 aa6.9□□□□□ -1.31
RC3H2-209ENST00000495727 FAM177BA6PVY3 158 aa6.89□□□□□ -1.31
RC3H2-209ENST00000495727 PTPRAP18433 802 aa6.89□□□□□ -1.31
RC3H2-209ENST00000495727 SAPCD2Q86UD0 394 aa6.89□□□□□ -1.31
RC3H2-209ENST00000495727 WFDC8Q8IUA0 241 aa6.89□□□□□ -1.31
RC3H2-209ENST00000495727 MAP4K3Q8IVH8 894 aa6.89□□□□□ -1.31
RC3H2-209ENST00000495727 NLGN1Q8N2Q7 840 aa6.89□□□□□ -1.31
RC3H2-209ENST00000495727 BHLHE41Q9C0J9 482 aaPredicted RBP6.89□□□□□ -1.31
RC3H2-209ENST00000495727 ROCK1Q13464 1354 aa6.89□□□□□ -1.31
RC3H2-209ENST00000495727 ANKRD31Q8N7Z5 1873 aa6.89□□□□□ -1.31
RC3H2-209ENST00000495727 MYH14Q7Z406 1995 aaKnown RBP6.88□□□□□ -1.31
RC3H2-209ENST00000495727 ZNF831Q5JPB2 1677 aa6.88□□□□□ -1.31
RC3H2-209ENST00000495727 PDE2AO00408 941 aaPredicted RBP6.88□□□□□ -1.31
RC3H2-209ENST00000495727 SOX1O00570 391 aaPredicted RBP6.88□□□□□ -1.31
RC3H2-209ENST00000495727 EPHX2P34913 555 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms