RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 DYNLL2Q96FJ2 89 aa17.7■□□□□ 0.42
ATG4B-223ENST00000493618 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■■□□□ 13.4
ATG4B-223ENST00000493618 GJD2Q9UKL4 321 aa17.7■□□□□ 0.42
ATG4B-223ENST00000493618 ALPK3Q96L96 1907 aa17.69■□□□□ 0.42
ATG4B-223ENST00000493618 SMIM22K7EJ46 135 aa17.69■□□□□ 0.42
ATG4B-223ENST00000493618 CYP2B6P20813 491 aa17.69■□□□□ 0.42
ATG4B-223ENST00000493618 GABPAQ06546 454 aa17.69■□□□□ 0.42
ATG4B-223ENST00000493618 TRIM32Q13049 653 aa17.69■□□□□ 0.42
ATG4B-223ENST00000493618 POTEEQ6S8J3 1075 aa17.69■□□□□ 0.42
ATG4B-223ENST00000493618 GPRC5AQ8NFJ5 357 aa17.69■□□□□ 0.42
ATG4B-223ENST00000493618 DEFB118Q96PH6 123 aa17.69■□□□□ 0.42
ATG4B-223ENST00000493618 CYP2D7A0A087X1C5 515 aa17.68■□□□□ 0.42
ATG4B-223ENST00000493618 SGPL1O95470 568 aa17.68■□□□□ 0.42
ATG4B-223ENST00000493618 ERVK-9P63128 1117 aa17.68■□□□□ 0.42
ATG4B-223ENST00000493618 ERVK-24P63145 666 aa17.68■□□□□ 0.42
ATG4B-223ENST00000493618 TSHZ3Q63HK5 1081 aa17.68■□□□□ 0.42
ATG4B-223ENST00000493618 C12orf42Q96LP6 360 aa17.68■□□□□ 0.42
ATG4B-223ENST00000493618 PORCNQ9H237 461 aa17.68■□□□□ 0.42
ATG4B-223ENST00000493618 PARP14Q460N5 1801 aa17.68■□□□□ 0.42
ATG4B-223ENST00000493618 RLFQ13129 1914 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 USP17L15C9J2P7 530 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 USP17L13C9JLJ4 530 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 USP17L11C9JVI0 530 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 USP17L18D6R9N7 530 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 USP17L22D6RA61 530 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 USP17L17D6RBQ6 530 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 USP17L19D6RCP7 530 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 USP17L20D6RJB6 530 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 TFRCP02786 760 aaKnown RBP17.67■□□□□ 0.42
ATG4B-223ENST00000493618 VCAM1P19320 739 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 USP14P54578 494 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 USP17L24Q0WX57 530 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 DPF3Q92784 378 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 KIAA1683Q9H0B3 1180 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 DCTPP1Q9H773 170 aa17.67■□□□□ 0.42
ATG4B-223ENST00000493618 COL11A1P12107 1806 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-223ENST00000493618 FRMPD3Q5JV73 1810 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 H0YGN5 161 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 CNMDO75829 334 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 FARP2O94887 1054 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-223ENST00000493618 HMGCRP04035 888 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 CATSPERGQ6ZRH7 1159 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 UBE2Q1Q7Z7E8 422 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 CLEC10AQ8IUN9 316 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 CCAR1Q8IX12 1150 aaKnown RBP17.66■□□□□ 0.42
ATG4B-223ENST00000493618 TRIB2Q92519 343 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.66■□□□□ 0.429e-8■■■□□ 15.9
ATG4B-223ENST00000493618 PUS7LQ9H0K6 701 aaKnown RBP17.66■□□□□ 0.42
ATG4B-223ENST00000493618 RPAP3Q9H6T3 665 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-223ENST00000493618 ECHDC1Q9NTX5 307 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 SLC4A4Q9Y6R1 1079 aa17.66■□□□□ 0.42
ATG4B-223ENST00000493618 A0A0G2JMZ2 1700 aa17.65■□□□□ 0.42
ATG4B-223ENST00000493618 A0A1W2PRG0 241 aa17.65■□□□□ 0.42
ATG4B-223ENST00000493618 AKR1B1P15121 316 aa17.65■□□□□ 0.42
ATG4B-223ENST00000493618 UBE3CQ15386 1083 aa17.65■□□□□ 0.42
ATG4B-223ENST00000493618 NUDT12Q9BQG2 462 aa17.65■□□□□ 0.42
ATG4B-223ENST00000493618 CWC22Q9HCG8 908 aaKnown RBP17.65■□□□□ 0.42
ATG4B-223ENST00000493618 PAK6Q9NQU5 681 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-223ENST00000493618 ATP8A2Q9NTI2 1148 aa17.65■□□□□ 0.42
ATG4B-223ENST00000493618 USP17L12C9JPN9 530 aa17.64■□□□□ 0.41
ATG4B-223ENST00000493618 USP17L21D6R901 530 aa17.64■□□□□ 0.41
ATG4B-223ENST00000493618 MAPK4P31152 587 aa17.64■□□□□ 0.41
ATG4B-223ENST00000493618 HABP4Q5JVS0 413 aaKnown RBP17.64■□□□□ 0.41
ATG4B-223ENST00000493618 WDR78Q5VTH9 848 aa17.64■□□□□ 0.41
ATG4B-223ENST00000493618 ZSCAN25Q6NSZ9 544 aa17.64■□□□□ 0.41
ATG4B-223ENST00000493618 GPR142Q7Z601 462 aa17.64■□□□□ 0.41
ATG4B-223ENST00000493618 GTF3C2Q8WUA4 911 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-223ENST00000493618 SWAP70Q9UH65 585 aa17.64■□□□□ 0.41
ATG4B-223ENST00000493618 PCDHB15Q9Y5E8 787 aa17.64■□□□□ 0.41
ATG4B-223ENST00000493618 KIAA1755Q5JYT7 1200 aa17.63■□□□□ 0.41
ATG4B-223ENST00000493618 C12orf60Q5U649 245 aa17.63■□□□□ 0.41
ATG4B-223ENST00000493618 TMEM179Q6ZVK1 233 aa17.63■□□□□ 0.41
ATG4B-223ENST00000493618 PLEKHH3Q7Z736 793 aa17.63■□□□□ 0.41
ATG4B-223ENST00000493618 BTBD7Q9P203 1132 aa17.63■□□□□ 0.41
ATG4B-223ENST00000493618 COLQQ9Y215 455 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-223ENST00000493618 RABGAP1Q9Y3P9 1069 aa17.63■□□□□ 0.41
ATG4B-223ENST00000493618 ZNFX1Q9P2E3 1918 aaKnown RBP17.62■□□□□ 0.41
ATG4B-223ENST00000493618 SPDYE16A6NNV3 312 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-223ENST00000493618 CDK8P49336 464 aa17.62■□□□□ 0.41
ATG4B-223ENST00000493618 CCL14Q16627 93 aa17.62■□□□□ 0.41
ATG4B-223ENST00000493618 AMOTL1Q8IY63 956 aa17.62■□□□□ 0.41
ATG4B-223ENST00000493618 STK11IPQ8N1F8 1099 aa17.62■□□□□ 0.41
ATG4B-223ENST00000493618 DIS3LQ8TF46 1054 aaKnown RBP17.62■□□□□ 0.41
ATG4B-223ENST00000493618 SOCS4Q8WXH5 440 aa17.62■□□□□ 0.41
ATG4B-223ENST00000493618 GPATCH3Q96I76 525 aa17.62■□□□□ 0.41
ATG4B-223ENST00000493618 HTATIP2Q9BUP3 242 aa17.62■□□□□ 0.41
ATG4B-223ENST00000493618 TANGO6Q9C0B7 1094 aa17.62■□□□□ 0.41
ATG4B-223ENST00000493618 CRISPLD2Q9H0B8 497 aa17.62■□□□□ 0.41
ATG4B-223ENST00000493618 HMX1Q9NP08 348 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-223ENST00000493618 GREB1LQ9C091 1923 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-223ENST00000493618 MYH4Q9Y623 1939 aa17.62■□□□□ 0.41
ATG4B-223ENST00000493618 PRKAR2AP13861 404 aaKnown RBP17.61■□□□□ 0.41
ATG4B-223ENST00000493618 ZKSCAN1P17029 563 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-223ENST00000493618 RRP1P56182 461 aaKnown RBP17.61■□□□□ 0.41
ATG4B-223ENST00000493618 MORN1Q5T089 497 aa17.61■□□□□ 0.41
ATG4B-223ENST00000493618 CTR9Q6PD62 1173 aa17.61■□□□□ 0.41
ATG4B-223ENST00000493618 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-223ENST00000493618 SIAH1Q8IUQ4 282 aa17.61■□□□□ 0.41
ATG4B-223ENST00000493618 USP6NLQ92738 828 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms