RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ANKRD13CQ8N6S4 541 aa12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 RAET1EQ8TD07 263 aa12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 FEZ1Q99689 392 aa12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 TMEM106CQ9BVX2 250 aa12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 PUS7LQ9H0K6 701 aaKnown RBP12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 SLC4A4Q9Y6R1 1079 aa12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 NAV1Q8NEY1 1877 aa12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 TNPO2O14787 897 aaKnown RBP12.62□□□□□ -0.39
SCAMP4-208ENST00000489554 RNF113AO15541 343 aaKnown RBP12.62□□□□□ -0.39
SCAMP4-208ENST00000489554 CDC45O75419 566 aa12.62□□□□□ -0.39
SCAMP4-208ENST00000489554 TICAM2Q86XR7 235 aa12.62□□□□□ -0.39
SCAMP4-208ENST00000489554 GTF3C2Q8WUA4 911 aaPredicted RBP12.62□□□□□ -0.39
SCAMP4-208ENST00000489554 APPBP2Q92624 585 aa12.62□□□□□ -0.39
SCAMP4-208ENST00000489554 C12orf42Q96LP6 360 aa12.62□□□□□ -0.39
SCAMP4-208ENST00000489554 KIAA1683Q9H0B3 1180 aa12.62□□□□□ -0.39
SCAMP4-208ENST00000489554 ZSWIM8A7E2V4 1837 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 A0A0D9SFI3 127 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L12C9JPN9 530 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L21D6R901 530 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 CYP2D6P10635 497 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 GRK4P32298 578 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 PRKCZQ05513 592 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 ZMYM1Q5SVZ6 1142 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 C12orf60Q5U649 245 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 SH3TC2Q8TF17 1288 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 COA7Q96BR5 231 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 FAM227BQ96M60 508 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 STRBPQ96SI9 672 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 FSD1Q9BTV5 496 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 ARPP21Q9UBL0 812 aaPredicted RBP12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 MORF4L1Q9UBU8 362 aa12.61□□□□□ -0.39
SCAMP4-208ENST00000489554 HTTP42858 3142 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 POTEFA5A3E0 1075 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 MPHOSPH10O00566 681 aaKnown RBP12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 SEC24BO95487 1268 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 HERVK_113P62684 666 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 EVX2Q03828 476 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 NMIQ13287 307 aaPredicted RBP12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 SEPT2Q15019 361 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 GIMAP6Q6P9H5 292 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 TMEM179Q6ZVK1 233 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 OSBP2Q969R2 916 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 CCDC17Q96LX7 622 aa12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 SEC62Q99442 399 aaKnown RBP12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 P2RX7Q99572 595 aaKnown RBP12.6□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L15C9J2P7 530 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L13C9JLJ4 530 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L11C9JVI0 530 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L18D6R9N7 530 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L22D6RA61 530 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L17D6RBQ6 530 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L19D6RCP7 530 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L20D6RJB6 530 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 GNAT2P19087 354 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 GUCY1A2P33402 732 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 CDK8P49336 464 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 FLT3LGP49771 235 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 UBXN2AP68543 259 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L24Q0WX57 530 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 IRF5Q13568 498 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 ZYXQ15942 572 aaKnown RBP12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 CTR9Q6PD62 1173 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 C16orf86Q6ZW13 317 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 SLC44A5Q8NCS7 719 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 ACER1Q8TDN7 264 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 DYNLL2Q96FJ2 89 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 ESYT1Q9BSJ8 1104 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 BACH2Q9BYV9 841 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 GABRQQ9UN88 632 aa12.59□□□□□ -0.39
SCAMP4-208ENST00000489554 CYP2D7A0A087X1C5 515 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 GSG1L2A8MUP6 293 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 M0R2C6 588 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 FOXP2O15409 715 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 SGSM2O43147 1006 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 GPAA1O43292 621 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 ADCY3O60266 1144 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 VCAM1P19320 739 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 SBK1Q52WX2 424 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 ZNF589Q86UQ0 364 aaPredicted RBP12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 GPRC5AQ8NFJ5 357 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 PXYLP1Q8TE99 480 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 SH2D4AQ9H788 454 aa12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 BIN2Q9UBW5 565 aaPredicted RBP12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 RBBP6Q7Z6E9 1792 aaKnown RBP12.58□□□□□ -0.4
SCAMP4-208ENST00000489554 AKR1B1P15121 316 aa12.57□□□□□ -0.4
SCAMP4-208ENST00000489554 EN2P19622 333 aaPredicted RBP12.57□□□□□ -0.4
SCAMP4-208ENST00000489554 CWC27Q6UX04 472 aaKnown RBP12.57□□□□□ -0.4
SCAMP4-208ENST00000489554 CATSPERGQ6ZRH7 1159 aa12.57□□□□□ -0.4
SCAMP4-208ENST00000489554 ARHGEF10LQ9HCE6 1279 aa12.57□□□□□ -0.4
SCAMP4-208ENST00000489554 RBPJLQ9UBG7 517 aa12.57□□□□□ -0.4
SCAMP4-208ENST00000489554 RBM19Q9Y4C8 960 aaKnown RBP12.57□□□□□ -0.4
SCAMP4-208ENST00000489554 HIP1O00291 1037 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 MYCP01106 439 aaPredicted RBP12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 MAPK4P31152 587 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 ERVK-9P63128 1117 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 ERVK-24P63145 666 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 ICA1Q05084 483 aa12.56□□□□□ -0.4
SCAMP4-208ENST00000489554 LBX2Q6XYB7 198 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms