RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 RCSD1Q6JBY9 416 aa23.37■■□□□ 1.33
ATP1A1-208ENST00000488733 CDC42EP5Q6NZY7 148 aa23.37■■□□□ 1.33
ATP1A1-208ENST00000488733 SRCAPQ6ZRS2 3230 aa23.37■■□□□ 1.33
ATP1A1-208ENST00000488733 AGBL3Q8NEM8 1001 aa23.37■■□□□ 1.33
ATP1A1-208ENST00000488733 KAT14Q9H8E8 782 aa23.37■■□□□ 1.33
ATP1A1-208ENST00000488733 RCOR1Q9UKL0 485 aa23.37■■□□□ 1.33
ATP1A1-208ENST00000488733 ZBTB12Q9Y330 459 aaPredicted RBP23.37■■□□□ 1.33
ATP1A1-208ENST00000488733 KIF23Q02241 960 aaPredicted RBP23.36■■□□□ 1.33
ATP1A1-208ENST00000488733 IL17RBQ9NRM6 502 aa23.36■■□□□ 1.33
ATP1A1-208ENST00000488733 LETM1O95202 739 aaPredicted RBP23.36■■□□□ 1.33
ATP1A1-208ENST00000488733 KIF5BP33176 963 aa23.36■■□□□ 1.33
ATP1A1-208ENST00000488733 MRE11P49959 708 aa23.36■■□□□ 1.33
ATP1A1-208ENST00000488733 TNIP1Q15025 636 aa23.36■■□□□ 1.33
ATP1A1-208ENST00000488733 PICALMQ13492 652 aa23.35■■□□□ 1.33
ATP1A1-208ENST00000488733 NEDD1Q8NHV4 660 aa23.35■■□□□ 1.33
ATP1A1-208ENST00000488733 AIFM3Q96NN9 605 aa23.35■■□□□ 1.33
ATP1A1-208ENST00000488733 HDAC9Q9UKV0 1011 aa23.35■■□□□ 1.33
ATP1A1-208ENST00000488733 PCDHAC2Q9Y5I4 1007 aa23.35■■□□□ 1.33
ATP1A1-208ENST00000488733 PRPF3O43395 683 aaKnown RBP23.34■■□□□ 1.33
ATP1A1-208ENST00000488733 CFAP100Q494V2 611 aa23.34■■□□□ 1.33
ATP1A1-208ENST00000488733 CCDC183Q5T5S1 534 aa23.34■■□□□ 1.33
ATP1A1-208ENST00000488733 OGFOD1Q8N543 542 aa23.34■■□□□ 1.33
ATP1A1-208ENST00000488733 SLC44A5Q8NCS7 719 aa23.34■■□□□ 1.33
ATP1A1-208ENST00000488733 GJB4Q9NTQ9 266 aa23.34■■□□□ 1.33
ATP1A1-208ENST00000488733 FZD9O00144 591 aa23.33■■□□□ 1.33
ATP1A1-208ENST00000488733 XBP1P17861 261 aa23.33■■□□□ 1.33
ATP1A1-208ENST00000488733 SAFBQ15424 915 aaKnown RBP eCLIP23.33■■□□□ 1.33
ATP1A1-208ENST00000488733 TMTC3Q6ZXV5 915 aa23.33■■□□□ 1.33
ATP1A1-208ENST00000488733 USP28Q96RU2 1077 aa23.33■■□□□ 1.33
ATP1A1-208ENST00000488733 OSBPL5Q9H0X9 879 aaPredicted RBP23.33■■□□□ 1.33
ATP1A1-208ENST00000488733 RTEL1Q9NZ71 1219 aa23.33■■□□□ 1.33
ATP1A1-208ENST00000488733 SWAP70Q9UH65 585 aa23.33■■□□□ 1.33
ATP1A1-208ENST00000488733 TAOK2Q9UL54 1235 aa23.33■■□□□ 1.33
ATP1A1-208ENST00000488733 NPM3O75607 178 aaKnown RBP23.33■■□□□ 1.32
ATP1A1-208ENST00000488733 LMNB1P20700 586 aa23.33■■□□□ 1.32
ATP1A1-208ENST00000488733 EIF6P56537 245 aaKnown RBP23.33■■□□□ 1.32
ATP1A1-208ENST00000488733 FUT2Q10981 343 aa23.33■■□□□ 1.32
ATP1A1-208ENST00000488733 GNL2Q13823 731 aaKnown RBP23.33■■□□□ 1.32
ATP1A1-208ENST00000488733 MYSM1Q5VVJ2 828 aa23.33■■□□□ 1.32
ATP1A1-208ENST00000488733 DDX4Q9NQI0 724 aaKnown RBP23.33■■□□□ 1.32
ATP1A1-208ENST00000488733 ECM29Q5VYK3 1845 aa23.32■■□□□ 1.32
ATP1A1-208ENST00000488733 HLA-DOAP06340 250 aa23.32■■□□□ 1.32
ATP1A1-208ENST00000488733 YBX3P16989 372 aaKnown RBP eCLIP23.32■■□□□ 1.32
ATP1A1-208ENST00000488733 U2AF2P26368 475 aaKnown RBP eCLIP23.32■■□□□ 1.32
ATP1A1-208ENST00000488733 GABPAQ06546 454 aa23.32■■□□□ 1.32
ATP1A1-208ENST00000488733 LRSAM1Q6UWE0 723 aa23.32■■□□□ 1.32
ATP1A1-208ENST00000488733 GAS2L3Q86XJ1 694 aa23.32■■□□□ 1.32
ATP1A1-208ENST00000488733 CCDC82Q8N4S0 544 aa23.32■■□□□ 1.32
ATP1A1-208ENST00000488733 PNMA1Q8ND90 353 aa23.32■■□□□ 1.32
ATP1A1-208ENST00000488733 GRPEL1Q9HAV7 217 aa23.32■■□□□ 1.32
ATP1A1-208ENST00000488733 GUCY1A2P33402 732 aa23.31■■□□□ 1.32
ATP1A1-208ENST00000488733 GNAQP50148 359 aa23.31■■□□□ 1.32
ATP1A1-208ENST00000488733 CMTR1Q8N1G2 835 aaKnown RBP23.31■■□□□ 1.32
ATP1A1-208ENST00000488733 IDI2Q9BXS1 227 aa23.31■■□□□ 1.32
ATP1A1-208ENST00000488733 POLR3EQ9NVU0 708 aa23.31■■□□□ 1.32
ATP1A1-208ENST00000488733 MMP1P03956 469 aa23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 DHX36Q9H2U1 1008 aaKnown RBP23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 SERPINB13Q9UIV8 391 aa23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 SYCE3A1L190 88 aa23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 SPDYE2BA6NHP3 402 aa23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 KIF28PB7ZC32 967 aa23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 PLEKHA8P1O95397 391 aa23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 YEATS4O95619 227 aa23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 SPDYE6P0CI01 402 aa23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 RPS12P25398 132 aaKnown RBP23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 CEBPZQ03701 1054 aaKnown RBP23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 PRMT6Q96LA8 375 aaPredicted RBP23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 EHD4Q9H223 541 aa23.3■■□□□ 1.32
ATP1A1-208ENST00000488733 NFIAQ12857 509 aa23.29■■□□□ 1.32
ATP1A1-208ENST00000488733 DLGAP5Q15398 846 aa23.29■■□□□ 1.32
ATP1A1-208ENST00000488733 PGBD1Q96JS3 809 aa23.29■■□□□ 1.32
ATP1A1-208ENST00000488733 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.29■■□□□ 1.32
ATP1A1-208ENST00000488733 FOXP1Q9H334 677 aaPredicted RBP23.29■■□□□ 1.32
ATP1A1-208ENST00000488733 STX8Q9UNK0 236 aa23.29■■□□□ 1.32
ATP1A1-208ENST00000488733 V9GY48 417 aaPredicted RBP23.29■■□□□ 1.32
ATP1A1-208ENST00000488733 PLIN4Q96Q06 1357 aa23.29■■□□□ 1.32
ATP1A1-208ENST00000488733 ZNF541Q9H0D2 1346 aa23.29■■□□□ 1.32
ATP1A1-208ENST00000488733 NOVP48745 357 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 NASPP49321 788 aaPredicted RBP23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 GRM4Q14833 912 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 KCNG4Q8TDN1 519 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 TMEM47Q9BQJ4 181 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 TDRD3Q9H7E2 651 aaKnown RBP23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 UBE2Q2LH0YL09 131 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 CACNB3P54284 484 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 PKN1Q16512 942 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 TPRNQ4KMQ1 711 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 SRBD1Q8N5C6 995 aaKnown RBP23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 BICD2Q8TD16 824 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 LZTS2Q9BRK4 669 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 GJA3Q9Y6H8 435 aa23.28■■□□□ 1.32
ATP1A1-208ENST00000488733 CNTNAP5Q8WYK1 1306 aa23.27■■□□□ 1.32
ATP1A1-208ENST00000488733 MYH6P13533 1939 aa23.27■■□□□ 1.32
ATP1A1-208ENST00000488733 TOP1P11387 765 aaKnown RBP23.27■■□□□ 1.32
ATP1A1-208ENST00000488733 MMP14P50281 582 aa23.27■■□□□ 1.32
ATP1A1-208ENST00000488733 STK38Q15208 465 aa23.27■■□□□ 1.32
ATP1A1-208ENST00000488733 LINC00301Q8NCQ3 95 aa23.27■■□□□ 1.32
ATP1A1-208ENST00000488733 XRCC6P12956 609 aaKnown RBP eCLIP23.26■■□□□ 1.31
ATP1A1-208ENST00000488733 GMPSP49915 693 aaPredicted RBP23.26■■□□□ 1.31
ATP1A1-208ENST00000488733 ANO1Q5XXA6 986 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms