RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 KRT37O76014 449 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 SSBP05455 408 aaKnown RBP eCLIP6.56□□□□□ -1.36
SF1-217ENST00000486960 GJA8P48165 433 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 FOXK1P85037 733 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 WASHC5Q12768 1159 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 Q3C1V9 767 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 HYIQ5T013 277 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 DLK2Q6UY11 383 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 TMC1Q8TDI8 760 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 FRS2Q8WU20 508 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 ATRIPQ8WXE1 791 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 CSRNP1Q96S65 589 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 SIN3AQ96ST3 1273 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 P2RX7Q99572 595 aaKnown RBP6.56□□□□□ -1.36
SF1-217ENST00000486960 FEZ1Q99689 392 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 ZBTB3Q9H5J0 574 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 LGR6Q9HBX8 967 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 NPDC1Q9NQX5 325 aaPredicted RBP6.56□□□□□ -1.36
SF1-217ENST00000486960 TAGLN3Q9UI15 199 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 NOD1Q9Y239 953 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 SLC45A1Q9Y2W3 748 aa6.56□□□□□ -1.36
SF1-217ENST00000486960 DNMT3AQ9Y6K1 912 aaPredicted RBP6.56□□□□□ -1.36
SF1-217ENST00000486960 RPTORQ8N122 1335 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 NDUFB5O43674 189 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 DIAPH1O60610 1272 aaKnown RBP6.55□□□□□ -1.36
SF1-217ENST00000486960 VAMP4O75379 141 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 TCEA3O75764 348 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 SCGB1D2O95969 90 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 HNRNPCP07910 306 aaKnown RBP eCLIP6.55□□□□□ -1.36
SF1-217ENST00000486960 PDE1CQ14123 709 aaPredicted RBP6.55□□□□□ -1.36
SF1-217ENST00000486960 SEPT2Q15019 361 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 LRRC41Q15345 812 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 ANO1Q5XXA6 986 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 C16orf86Q6ZW13 317 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 PNMA8AQ86V59 439 aaPredicted RBP6.55□□□□□ -1.36
SF1-217ENST00000486960 ZNF354CQ86Y25 554 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 ANKRD13BQ86YJ7 626 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 JAMLQ86YT9 394 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 SPICE1Q8N0Z3 855 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 ANKRD42Q8N9B4 389 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 HELQQ8TDG4 1101 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 SKA1Q96BD8 255 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 NGRNQ9NPE2 291 aaKnown RBP6.55□□□□□ -1.36
SF1-217ENST00000486960 RNF19AQ9NV58 838 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 POGKQ9P215 609 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 SPG7Q9UQ90 795 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 ZNF652Q9Y2D9 606 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 XIRP2A4UGR9 3374 aa6.55□□□□□ -1.36
SF1-217ENST00000486960 LTBP3Q9NS15 1303 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 SHTN1A0MZ66 631 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 RRP9O43818 475 aaKnown RBP6.54□□□□□ -1.36
SF1-217ENST00000486960 PPFIA3O75145 1194 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 PMLP29590 882 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 SLC4A3P48751 1232 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 NFX1Q12986 1120 aaKnown RBP6.54□□□□□ -1.36
SF1-217ENST00000486960 TOMM20Q15388 145 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 UVSSAQ2YD98 709 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 GPR153Q6NV75 609 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 ERAP2Q6P179 960 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 HS2ST1Q7LGA3 356 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 SIX5Q8N196 739 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 TTLL6Q8N841 843 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 TTC8Q8TAM2 541 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 TRPM4Q8TD43 1214 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 PXYLP1Q8TE99 480 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 RPGRQ92834 1020 aaKnown RBP6.54□□□□□ -1.36
SF1-217ENST00000486960 GPRASP2Q96D09 838 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 MPP4Q96JB8 637 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 CFAP53Q96M91 514 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 SRA1Q9HD15 236 aaKnown RBP6.54□□□□□ -1.36
SF1-217ENST00000486960 LUZP4Q9P127 313 aa6.54□□□□□ -1.36
SF1-217ENST00000486960 TCF20Q9UGU0 1960 aaKnown RBP6.53□□□□□ -1.36
SF1-217ENST00000486960 FAM170AA1A519 330 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 POLRMTO00411 1230 aaKnown RBP6.53□□□□□ -1.36
SF1-217ENST00000486960 TBC1D8O95759 1140 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 SRGNP10124 158 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 MRE11P49959 708 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 MTMR3Q13615 1198 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 DCTN1Q14203 1278 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 PUM3Q15397 648 aaKnown RBP6.53□□□□□ -1.36
SF1-217ENST00000486960 ZKSCAN8Q15776 578 aaPredicted RBP6.53□□□□□ -1.36
SF1-217ENST00000486960 FAM83BQ5T0W9 1011 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 ANKS3Q6ZW76 656 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 SKAP1Q86WV1 359 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 ENAHQ8N8S7 591 aaPredicted RBP6.53□□□□□ -1.36
SF1-217ENST00000486960 PAWRQ96IZ0 340 aaKnown RBP6.53□□□□□ -1.36
SF1-217ENST00000486960 PRIMPOLQ96LW4 560 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 SCLT1Q96NL6 688 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 GLIS2Q9BZE0 524 aaPredicted RBP6.53□□□□□ -1.36
SF1-217ENST00000486960 R3HDMLQ9H3Y0 253 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 C14orf93Q9H972 538 aaKnown RBP6.53□□□□□ -1.36
SF1-217ENST00000486960 ZNF408Q9H9D4 720 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 KANSL2Q9H9L4 492 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 SRP68Q9UHB9 627 aaKnown RBP6.53□□□□□ -1.36
SF1-217ENST00000486960 TMCC3Q9ULS5 477 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 DAAM1Q9Y4D1 1078 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 MRVI1Q9Y6F6 885 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 KDM3BQ7LBC6 1761 aa6.53□□□□□ -1.36
SF1-217ENST00000486960 FASNP49327 2511 aaKnown RBP6.53□□□□□ -1.36
SF1-217ENST00000486960 MAST4O15021 2626 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms