RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 TSPY8P0CW00 308 aa16.85■□□□□ 0.29
PKNOX1-206ENST00000480179 PICALMQ13492 652 aa16.85■□□□□ 0.29
PKNOX1-206ENST00000480179 PPP2R5BQ15173 497 aa16.85■□□□□ 0.29
PKNOX1-206ENST00000480179 ZNF444Q8N0Y2 327 aaPredicted RBP16.85■□□□□ 0.29
PKNOX1-206ENST00000480179 CTCFLQ8NI51 663 aaPredicted RBP16.85■□□□□ 0.29
PKNOX1-206ENST00000480179 SNED1Q8TER0 1413 aa16.85■□□□□ 0.29
PKNOX1-206ENST00000480179 ZNF646O15015 1829 aaPredicted RBP16.85■□□□□ 0.29
PKNOX1-206ENST00000480179 USP17L3A6NCW0 530 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 USP17L4A6NCW7 530 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 GLTPD2A6NH11 291 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 NR1I2O75469 434 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 VEGFAP15692 232 aaPredicted RBP16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 RASA1P20936 1047 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 CAMK4Q16566 473 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 RCSD1Q6JBY9 416 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 TMTC3Q6ZXV5 915 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 USP17L1Q7RTZ2 530 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 CCAR1Q8IX12 1150 aaKnown RBP16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 RNF26Q9BY78 433 aaPredicted RBP16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 KAT14Q9H8E8 782 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 IL17RBQ9NRM6 502 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 DDX19AQ9NUU7 478 aaKnown RBP16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 hCG_1642624A0A1W2PR95 340 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 CDK8P49336 464 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 FUT2Q10981 343 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 SAFBQ15424 915 aaKnown RBP eCLIP16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 SF3A1Q15459 793 aaKnown RBP16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 AOC3Q16853 763 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 ANO1Q5XXA6 986 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 DPY19L2Q6NUT2 758 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 C16orf86Q6ZW13 317 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 PODNQ7Z5L7 613 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 GOLPH3LQ9H4A5 285 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 CLSTN2Q9H4D0 955 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 POLR3EQ9NVU0 708 aa16.84■□□□□ 0.29
PKNOX1-206ENST00000480179 YEATS4O95619 227 aa16.83■□□□□ 0.28
PKNOX1-206ENST00000480179 MMP1P03956 469 aa16.83■□□□□ 0.28
PKNOX1-206ENST00000480179 CCDC73Q6ZRK6 1079 aa16.83■□□□□ 0.28
PKNOX1-206ENST00000480179 LINC00301Q8NCQ3 95 aa16.83■□□□□ 0.28
PKNOX1-206ENST00000480179 TEKT1Q969V4 418 aa16.83■□□□□ 0.28
PKNOX1-206ENST00000480179 TNMDQ9H2S6 317 aa16.83■□□□□ 0.28
PKNOX1-206ENST00000480179 ZNF287Q9HBT7 754 aa16.83■□□□□ 0.28
PKNOX1-206ENST00000480179 USP40Q9NVE5 1235 aa16.83■□□□□ 0.28
PKNOX1-206ENST00000480179 CNTNAP5Q8WYK1 1306 aa16.83■□□□□ 0.28
PKNOX1-206ENST00000480179 U2AF2P26368 475 aaKnown RBP eCLIP16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 NT5C2P49902 561 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 MAP3K11Q16584 847 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 DIS3L2Q8IYB7 885 aaKnown RBP16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 FSIP1Q8NA03 581 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 KCNG4Q8TDN1 519 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 C7orf43Q8WVR3 580 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 PCDHA7Q9UN72 937 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 SBF1O95248 1867 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 MYH8P13535 1937 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 SPTLC2O15270 562 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 PRPF3O43395 683 aaKnown RBP16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 C21orf2O43822 256 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 CCDC178Q5BJE1 867 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 KIAA0825Q8IV33 1275 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 PNMA1Q8ND90 353 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 KLRG1Q96E93 195 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 DDX4Q9NQI0 724 aaKnown RBP16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 VPS54Q9P1Q0 977 aa16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 V9GY48 417 aaPredicted RBP16.82■□□□□ 0.28
PKNOX1-206ENST00000480179 BTBD18B2RXH4 712 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 NFKBIEO00221 500 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 WDHD1O75717 1129 aaPredicted RBP16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 CRKP46108 304 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 PKN1Q16512 942 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 HHIPL2Q6UWX4 724 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 DGKHQ86XP1 1220 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 NOSTRINQ8IVI9 506 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 CKAP2LQ8IYA6 745 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 SRBD1Q8N5C6 995 aaKnown RBP16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 PIBF1Q8WXW3 757 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 ANKS1AQ92625 1134 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 TCP11L1Q9NUJ3 509 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 MTMR7Q9Y216 660 aa16.81■□□□□ 0.28
PKNOX1-206ENST00000480179 KIF5BP33176 963 aa16.8■□□□□ 0.28
PKNOX1-206ENST00000480179 HTRA3P83110 453 aa16.8■□□□□ 0.28
PKNOX1-206ENST00000480179 DACT2Q5SW24 774 aa16.8■□□□□ 0.28
PKNOX1-206ENST00000480179 STRIP1Q5VSL9 837 aa16.8■□□□□ 0.28
PKNOX1-206ENST00000480179 CDC42EP5Q6NZY7 148 aa16.8■□□□□ 0.28
PKNOX1-206ENST00000480179 MRPS27Q92552 414 aaKnown RBP16.8■□□□□ 0.28
PKNOX1-206ENST00000480179 SHISA4Q96DD7 197 aa16.8■□□□□ 0.28
PKNOX1-206ENST00000480179 FUCA2Q9BTY2 467 aa16.8■□□□□ 0.28
PKNOX1-206ENST00000480179 STX8Q9UNK0 236 aa16.8■□□□□ 0.28
PKNOX1-206ENST00000480179 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
PKNOX1-206ENST00000480179 XBP1P17861 261 aa16.79■□□□□ 0.28
PKNOX1-206ENST00000480179 PRELPP51888 382 aa16.79■□□□□ 0.28
PKNOX1-206ENST00000480179 SOGA3Q5TF21 947 aa16.79■□□□□ 0.28
PKNOX1-206ENST00000480179 CC2D2BQ6DHV5 1058 aa16.79■□□□□ 0.28
PKNOX1-206ENST00000480179 APOBEC3HQ6NTF7 200 aaKnown RBP16.79■□□□□ 0.28
PKNOX1-206ENST00000480179 SUPT20HQ8NEM7 779 aa16.79■□□□□ 0.28
PKNOX1-206ENST00000480179 OXER1Q8TDS5 423 aa16.79■□□□□ 0.28
PKNOX1-206ENST00000480179 CCDC192P0DO97 292 aa16.79■□□□□ 0.28
PKNOX1-206ENST00000480179 MARCKSP29966 332 aaPredicted RBP16.79■□□□□ 0.28
PKNOX1-206ENST00000480179 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.284e-6■■□□□ 12.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms